Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Rfx3P48381 Gm11835-201ENSMUST00000120635 663 ntBASIC1.5□□□□□ -2.17
Rfx3P48381 Gm25279-201ENSMUST00000122608 133 ntBASIC1.5□□□□□ -2.17
Rfx3P48381 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.5□□□□□ -2.17
Rfx3P48381 Gm24480-201ENSMUST00000157442 103 ntBASIC1.5□□□□□ -2.17
Rfx3P48381 Gm22665-201ENSMUST00000158720 275 ntBASIC1.5□□□□□ -2.17
Rfx3P48381 Gm21737-201ENSMUST00000178112 664 ntBASIC1.5□□□□□ -2.17
Rfx3P48381 Gm21815-201ENSMUST00000178213 664 ntBASIC1.5□□□□□ -2.17
Rfx3P48381 Gm20901-201ENSMUST00000180177 664 ntBASIC1.5□□□□□ -2.17
Rfx3P48381 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Rfx3P48381 Gm28090-201ENSMUST00000189458 664 ntBASIC1.5□□□□□ -2.17
Rfx3P48381 Gm21647-201ENSMUST00000189755 664 ntBASIC1.5□□□□□ -2.17
Rfx3P48381 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.5□□□□□ -2.17
Rfx3P48381 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.5□□□□□ -2.17
Rfx3P48381 AC120394.1-201ENSMUST00000217153 351 ntBASIC1.5□□□□□ -2.17
Rfx3P48381 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.5□□□□□ -2.17
Rfx3P48381 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.49□□□□□ -2.17
Rfx3P48381 Mir301b-201ENSMUST00000102333 97 ntBASIC1.49□□□□□ -2.17
Rfx3P48381 Gm15526-201ENSMUST00000112504 204 ntBASIC1.49□□□□□ -2.17
Rfx3P48381 Gm13432-201ENSMUST00000118861 241 ntBASIC1.49□□□□□ -2.17
Rfx3P48381 Gm22556-201ENSMUST00000157803 100 ntBASIC1.49□□□□□ -2.17
Rfx3P48381 Gm23022-201ENSMUST00000158768 180 ntBASIC1.49□□□□□ -2.17
Rfx3P48381 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.49□□□□□ -2.17
Rfx3P48381 Gm27236-201ENSMUST00000184147 442 ntBASIC1.49□□□□□ -2.17
Rfx3P48381 Mir7241-201ENSMUST00000184532 64 ntBASIC1.49□□□□□ -2.17
Rfx3P48381 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Rfx3P48381 Gm44482-201ENSMUST00000199232 103 ntBASIC1.49□□□□□ -2.17
Rfx3P48381 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Rfx3P48381 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.49□□□□□ -2.17
Rfx3P48381 Gm24406-201ENSMUST00000083026 128 ntBASIC1.49□□□□□ -2.17
Rfx3P48381 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Rfx3P48381 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Rfx3P48381 Gm12770-201ENSMUST00000121734 462 ntBASIC1.48□□□□□ -2.17
Rfx3P48381 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.48□□□□□ -2.17
Rfx3P48381 Gm25054-201ENSMUST00000157370 97 ntBASIC1.48□□□□□ -2.17
Rfx3P48381 Mir1949-201ENSMUST00000157434 141 ntBASIC1.48□□□□□ -2.17
Rfx3P48381 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Rfx3P48381 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Rfx3P48381 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Rfx3P48381 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.48□□□□□ -2.17
Rfx3P48381 Gm43583-201ENSMUST00000199235 303 ntBASIC1.48□□□□□ -2.17
Rfx3P48381 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.48□□□□□ -2.17
Rfx3P48381 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.48□□□□□ -2.17
Rfx3P48381 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Rfx3P48381 Gm25589-201ENSMUST00000082502 166 ntBASIC1.48□□□□□ -2.17
Rfx3P48381 Gm24623-201ENSMUST00000082616 194 ntBASIC1.48□□□□□ -2.17
Rfx3P48381 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.48□□□□□ -2.17
Rfx3P48381 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.48□□□□□ -2.17
Rfx3P48381 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Rfx3P48381 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Rfx3P48381 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Rfx3P48381 Gm24598-201ENSMUST00000122510 74 ntBASIC1.47□□□□□ -2.17
Rfx3P48381 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Rfx3P48381 Gm25059-201ENSMUST00000157367 117 ntBASIC1.47□□□□□ -2.17
Rfx3P48381 Gm22338-201ENSMUST00000157715 129 ntBASIC1.47□□□□□ -2.17
Rfx3P48381 Gm24577-201ENSMUST00000158580 63 ntBASIC1.47□□□□□ -2.17
Rfx3P48381 Gm17148-201ENSMUST00000164702 249 ntBASIC1.47□□□□□ -2.17
Rfx3P48381 Gm22308-201ENSMUST00000177609 107 ntBASIC1.47□□□□□ -2.17
Rfx3P48381 Gm20874-201ENSMUST00000178356 663 ntBASIC1.47□□□□□ -2.17
Rfx3P48381 Mir7679-201ENSMUST00000183379 63 ntBASIC1.47□□□□□ -2.17
Rfx3P48381 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.47□□□□□ -2.17
Rfx3P48381 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC1.47□□□□□ -2.17
Rfx3P48381 Gm34073-201ENSMUST00000195736 212 ntBASIC1.47□□□□□ -2.17
Rfx3P48381 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.47□□□□□ -2.17
Rfx3P48381 AC130821.1-201ENSMUST00000221997 293 ntBASIC1.47□□□□□ -2.17
Rfx3P48381 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.47□□□□□ -2.17
Rfx3P48381 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Rfx3P48381 Gm22997-201ENSMUST00000082845 107 ntBASIC1.47□□□□□ -2.17
Rfx3P48381 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.47□□□□□ -2.17
Rfx3P48381 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
Rfx3P48381 Gm25377-201ENSMUST00000104334 129 ntBASIC1.46□□□□□ -2.18
Rfx3P48381 Gm14674-201ENSMUST00000117816 342 ntBASIC1.46□□□□□ -2.18
Rfx3P48381 Gm24896-201ENSMUST00000122741 135 ntBASIC1.46□□□□□ -2.18
Rfx3P48381 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC1.46□□□□□ -2.18
Rfx3P48381 Gm25115-201ENSMUST00000157187 140 ntBASIC1.46□□□□□ -2.18
Rfx3P48381 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Rfx3P48381 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Rfx3P48381 Mir3086-201ENSMUST00000175072 87 ntBASIC1.46□□□□□ -2.18
Rfx3P48381 Gm24333-201ENSMUST00000175101 84 ntBASIC1.46□□□□□ -2.18
Rfx3P48381 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC1.46□□□□□ -2.18
Rfx3P48381 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.46□□□□□ -2.18
Rfx3P48381 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.46□□□□□ -2.18
Rfx3P48381 Gm27265-201ENSMUST00000183559 77 ntBASIC1.46□□□□□ -2.18
Rfx3P48381 Mir6399-201ENSMUST00000184050 84 ntBASIC1.46□□□□□ -2.18
Rfx3P48381 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.46□□□□□ -2.18
Rfx3P48381 Gm44337-201ENSMUST00000196553 114 ntBASIC1.46□□□□□ -2.18
Rfx3P48381 Mir3961-201ENSMUST00000198795 59 ntBASIC1.46□□□□□ -2.18
Rfx3P48381 Gm44726-201ENSMUST00000203427 217 ntBASIC1.46□□□□□ -2.18
Rfx3P48381 Gm44429-201ENSMUST00000203542 186 ntBASIC1.46□□□□□ -2.18
Rfx3P48381 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC1.46□□□□□ -2.18
Rfx3P48381 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.46□□□□□ -2.18
Rfx3P48381 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.46□□□□□ -2.18
Rfx3P48381 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.46□□□□□ -2.18
Rfx3P48381 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.46□□□□□ -2.18
Rfx3P48381 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.46□□□□□ -2.18
Rfx3P48381 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.46□□□□□ -2.18
Rfx3P48381 Gm23172-201ENSMUST00000157160 124 ntBASIC1.45□□□□□ -2.18
Rfx3P48381 Gm22316-201ENSMUST00000158012 216 ntBASIC1.45□□□□□ -2.18
Rfx3P48381 Gm24084-201ENSMUST00000175173 137 ntBASIC1.45□□□□□ -2.18
Rfx3P48381 Gm25314-201ENSMUST00000178810 79 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 151.5 ms