Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm27592-201ENSMUST00000157729 126 ntBASIC3.86□□□□□ -1.79
Rfx1P48377 Gm24730-201ENSMUST00000158228 117 ntBASIC3.86□□□□□ -1.79
Rfx1P48377 Gm25012-201ENSMUST00000158396 164 ntBASIC3.86□□□□□ -1.79
Rfx1P48377 Gm22532-201ENSMUST00000158822 140 ntBASIC3.86□□□□□ -1.79
Rfx1P48377 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC3.86□□□□□ -1.79
Rfx1P48377 Gm22174-201ENSMUST00000175050 125 ntBASIC3.86□□□□□ -1.79
Rfx1P48377 Gm22692-201ENSMUST00000175055 125 ntBASIC3.86□□□□□ -1.79
Rfx1P48377 Gm27634-201ENSMUST00000175060 126 ntBASIC3.86□□□□□ -1.79
Rfx1P48377 Gm22460-201ENSMUST00000175269 124 ntBASIC3.86□□□□□ -1.79
Rfx1P48377 Gm26141-201ENSMUST00000175299 126 ntBASIC3.86□□□□□ -1.79
Rfx1P48377 Gm25535-201ENSMUST00000175364 125 ntBASIC3.86□□□□□ -1.79
Rfx1P48377 Gm24365-201ENSMUST00000175384 125 ntBASIC3.86□□□□□ -1.79
Rfx1P48377 Gm44310-201ENSMUST00000175424 126 ntBASIC3.86□□□□□ -1.79
Rfx1P48377 Gm22639-201ENSMUST00000175591 125 ntBASIC3.86□□□□□ -1.79
Rfx1P48377 Gm24979-201ENSMUST00000178626 126 ntBASIC3.86□□□□□ -1.79
Rfx1P48377 Gm27743-201ENSMUST00000185136 126 ntBASIC3.86□□□□□ -1.79
Rfx1P48377 Gm28992-201ENSMUST00000190534 139 ntBASIC3.86□□□□□ -1.79
Rfx1P48377 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.86□□□□□ -1.79
Rfx1P48377 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Rfx1P48377 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Rfx1P48377 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Rfx1P48377 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Rfx1P48377 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
Rfx1P48377 Gm25572-201ENSMUST00000157527 172 ntBASIC3.85□□□□□ -1.79
Rfx1P48377 Gm24001-201ENSMUST00000158463 85 ntBASIC3.85□□□□□ -1.79
Rfx1P48377 Gm24553-201ENSMUST00000158653 131 ntBASIC3.85□□□□□ -1.79
Rfx1P48377 Mir6408-201ENSMUST00000183643 91 ntBASIC3.85□□□□□ -1.79
Rfx1P48377 Gm29553-201ENSMUST00000189692 279 ntBASIC3.85□□□□□ -1.79
Rfx1P48377 Gm34779-201ENSMUST00000210036 263 ntBASIC3.85□□□□□ -1.79
Rfx1P48377 CU062626.2-201ENSMUST00000223953 274 ntBASIC3.85□□□□□ -1.79
Rfx1P48377 AC164164.1-201ENSMUST00000223245 2340 ntBASIC3.85□□□□□ -1.79
Rfx1P48377 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.85□□□□□ -1.79
Rfx1P48377 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Rfx1P48377 Gm25833-201ENSMUST00000104137 133 ntBASIC3.84□□□□□ -1.79
Rfx1P48377 Gm26423-201ENSMUST00000104277 128 ntBASIC3.84□□□□□ -1.79
Rfx1P48377 Gm12897-201ENSMUST00000120341 250 ntBASIC3.84□□□□□ -1.79
Rfx1P48377 Gm25494-201ENSMUST00000158143 100 ntBASIC3.84□□□□□ -1.79
Rfx1P48377 Gm25223-201ENSMUST00000158200 110 ntBASIC3.84□□□□□ -1.79
Rfx1P48377 Gm37918-201ENSMUST00000192071 120 ntBASIC3.84□□□□□ -1.79
Rfx1P48377 Mir1a-2-201ENSMUST00000198520 72 ntBASIC3.84□□□□□ -1.79
Rfx1P48377 AC160863.1-201ENSMUST00000218412 317 ntBASIC3.84□□□□□ -1.79
Rfx1P48377 AC134577.1-201ENSMUST00000227572 295 ntBASIC3.84□□□□□ -1.79
Rfx1P48377 Gm23246-201ENSMUST00000083371 67 ntBASIC3.84□□□□□ -1.79
Rfx1P48377 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Rfx1P48377 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Rfx1P48377 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.8
Rfx1P48377 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
Rfx1P48377 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Rfx1P48377 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Rfx1P48377 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Rfx1P48377 Gm25538-201ENSMUST00000101943 107 ntBASIC3.83□□□□□ -1.8
Rfx1P48377 Gm13797-201ENSMUST00000121792 120 ntBASIC3.83□□□□□ -1.8
Rfx1P48377 Gm26020-201ENSMUST00000122729 183 ntBASIC3.83□□□□□ -1.8
Rfx1P48377 Gm22281-201ENSMUST00000157198 103 ntBASIC3.83□□□□□ -1.8
Rfx1P48377 Gm24440-201ENSMUST00000157236 63 ntBASIC3.83□□□□□ -1.8
Rfx1P48377 Gm23540-201ENSMUST00000157543 164 ntBASIC3.83□□□□□ -1.8
Rfx1P48377 Gm23755-201ENSMUST00000157578 343 ntBASIC3.83□□□□□ -1.8
Rfx1P48377 Gm24512-201ENSMUST00000174963 65 ntBASIC3.83□□□□□ -1.8
Rfx1P48377 Gm43676-201ENSMUST00000197532 540 ntBASIC3.83□□□□□ -1.8
Rfx1P48377 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC3.83□□□□□ -1.8
Rfx1P48377 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.83□□□□□ -1.8
Rfx1P48377 Gm22248-201ENSMUST00000082482 150 ntBASIC3.83□□□□□ -1.8
Rfx1P48377 Mir124a-3-201ENSMUST00000083520 68 ntBASIC3.83□□□□□ -1.8
Rfx1P48377 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Rfx1P48377 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.83□□□□□ -1.8
Rfx1P48377 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Rfx1P48377 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.83□□□□□ -1.8
Rfx1P48377 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.83□□□□□ -1.8
Rfx1P48377 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.82□□□□□ -1.8
Rfx1P48377 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
Rfx1P48377 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC3.82□□□□□ -1.8
Rfx1P48377 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Rfx1P48377 Gm25764-201ENSMUST00000104092 134 ntBASIC3.82□□□□□ -1.8
Rfx1P48377 Gm25105-201ENSMUST00000122477 130 ntBASIC3.82□□□□□ -1.8
Rfx1P48377 Gm24936-201ENSMUST00000122598 247 ntBASIC3.82□□□□□ -1.8
Rfx1P48377 Gm15733-201ENSMUST00000132957 242 ntBASIC3.82□□□□□ -1.8
Rfx1P48377 Gm26412-201ENSMUST00000157666 55 ntBASIC3.82□□□□□ -1.8
Rfx1P48377 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Rfx1P48377 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Rfx1P48377 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Rfx1P48377 Gm17522-201ENSMUST00000178144 498 ntBASIC3.82□□□□□ -1.8
Rfx1P48377 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Rfx1P48377 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Rfx1P48377 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.82□□□□□ -1.8
Rfx1P48377 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.82□□□□□ -1.8
Rfx1P48377 Mir302d-201ENSMUST00000083513 66 ntBASIC3.82□□□□□ -1.8
Rfx1P48377 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Rfx1P48377 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
Rfx1P48377 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Rfx1P48377 Mir693-201ENSMUST00000102187 89 ntBASIC3.81□□□□□ -1.8
Rfx1P48377 Gm22193-201ENSMUST00000116868 76 ntBASIC3.81□□□□□ -1.8
Rfx1P48377 Gm12458-201ENSMUST00000119387 495 ntBASIC3.81□□□□□ -1.8
Rfx1P48377 Gm22722-201ENSMUST00000157467 132 ntBASIC3.81□□□□□ -1.8
Rfx1P48377 Gm22833-201ENSMUST00000158292 132 ntBASIC3.81□□□□□ -1.8
Rfx1P48377 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC3.81□□□□□ -1.8
Rfx1P48377 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.81□□□□□ -1.8
Rfx1P48377 Gm45445-201ENSMUST00000209586 232 ntBASIC3.81□□□□□ -1.8
Rfx1P48377 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.81□□□□□ -1.8
Rfx1P48377 Gm18617-201ENSMUST00000222311 259 ntBASIC3.81□□□□□ -1.8
Rfx1P48377 AC154552.7-201ENSMUST00000222824 156 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 97.2 ms