Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
Cdx2P43241 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
Cdx2P43241 Gm23435-201ENSMUST00000157183 156 ntBASIC0.83□□□□□ -2.28
Cdx2P43241 Gm23331-201ENSMUST00000157423 108 ntBASIC0.83□□□□□ -2.28
Cdx2P43241 Gm26358-201ENSMUST00000158215 97 ntBASIC0.83□□□□□ -2.28
Cdx2P43241 Gm23854-201ENSMUST00000158378 108 ntBASIC0.83□□□□□ -2.28
Cdx2P43241 Gm22164-201ENSMUST00000158413 106 ntBASIC0.83□□□□□ -2.28
Cdx2P43241 Gm22668-201ENSMUST00000158716 260 ntBASIC0.83□□□□□ -2.28
Cdx2P43241 Igkv17-134-201ENSMUST00000168310 348 ntBASIC0.83□□□□□ -2.28
Cdx2P43241 Gm20438-201ENSMUST00000174441 329 ntBASIC0.83□□□□□ -2.28
Cdx2P43241 Gm20613-201ENSMUST00000175828 345 ntBASIC0.83□□□□□ -2.28
Cdx2P43241 Gm22633-201ENSMUST00000179834 107 ntBASIC0.83□□□□□ -2.28
Cdx2P43241 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
Cdx2P43241 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
Cdx2P43241 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
Cdx2P43241 AC162931.1-201ENSMUST00000214184 267 ntBASIC0.83□□□□□ -2.28
Cdx2P43241 AC159476.2-201ENSMUST00000216221 418 ntBASIC0.83□□□□□ -2.28
Cdx2P43241 AC159203.2-201ENSMUST00000221326 193 ntBASIC0.83□□□□□ -2.28
Cdx2P43241 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
Cdx2P43241 Gm6369-201ENSMUST00000069626 412 ntBASIC0.83□□□□□ -2.28
Cdx2P43241 Gm22508-201ENSMUST00000082772 110 ntBASIC0.83□□□□□ -2.28
Cdx2P43241 Gm24045-201ENSMUST00000083113 98 ntBASIC0.83□□□□□ -2.28
Cdx2P43241 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
Cdx2P43241 Gm25787-201ENSMUST00000104709 92 ntBASIC0.82□□□□□ -2.28
Cdx2P43241 Gm14937-201ENSMUST00000119709 208 ntBASIC0.82□□□□□ -2.28
Cdx2P43241 Gm15214-201ENSMUST00000122155 470 ntBASIC0.82□□□□□ -2.28
Cdx2P43241 Gm24598-201ENSMUST00000122510 74 ntBASIC0.82□□□□□ -2.28
Cdx2P43241 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC0.82□□□□□ -2.28
Cdx2P43241 Gm23819-201ENSMUST00000158744 109 ntBASIC0.82□□□□□ -2.28
Cdx2P43241 Gm25162-201ENSMUST00000158906 159 ntBASIC0.82□□□□□ -2.28
Cdx2P43241 Gm25451-201ENSMUST00000177832 121 ntBASIC0.82□□□□□ -2.28
Cdx2P43241 Gm24020-201ENSMUST00000180156 108 ntBASIC0.82□□□□□ -2.28
Cdx2P43241 Gm29134-201ENSMUST00000186579 126 ntBASIC0.82□□□□□ -2.28
Cdx2P43241 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
Cdx2P43241 Gm28337-201ENSMUST00000190425 666 ntBASIC0.82□□□□□ -2.28
Cdx2P43241 Gm31123-201ENSMUST00000192094 666 ntBASIC0.82□□□□□ -2.28
Cdx2P43241 Gm18703-201ENSMUST00000215318 333 ntBASIC0.82□□□□□ -2.28
Cdx2P43241 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC0.82□□□□□ -2.28
Cdx2P43241 Gm25131-201ENSMUST00000082653 151 ntBASIC0.82□□□□□ -2.28
Cdx2P43241 Mir340-201ENSMUST00000083483 98 ntBASIC0.82□□□□□ -2.28
Cdx2P43241 Gm23656-201ENSMUST00000122626 112 ntBASIC0.81□□□□□ -2.28
Cdx2P43241 Gm22597-201ENSMUST00000157602 80 ntBASIC0.81□□□□□ -2.28
Cdx2P43241 Gm25914-201ENSMUST00000157618 153 ntBASIC0.81□□□□□ -2.28
Cdx2P43241 Gm23589-201ENSMUST00000157660 105 ntBASIC0.81□□□□□ -2.28
Cdx2P43241 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC0.81□□□□□ -2.28
Cdx2P43241 Gm23862-201ENSMUST00000180342 94 ntBASIC0.81□□□□□ -2.28
Cdx2P43241 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC0.81□□□□□ -2.28
Cdx2P43241 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC0.81□□□□□ -2.28
Cdx2P43241 Gm29037-201ENSMUST00000189092 313 ntBASIC0.81□□□□□ -2.28
Cdx2P43241 Gm37727-201ENSMUST00000191637 819 ntBASIC0.81□□□□□ -2.28
Cdx2P43241 Gm43914-201ENSMUST00000203592 594 ntBASIC0.81□□□□□ -2.28
Cdx2P43241 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC0.81□□□□□ -2.28
Cdx2P43241 Gm45590-201ENSMUST00000209715 262 ntBASIC0.81□□□□□ -2.28
Cdx2P43241 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.81□□□□□ -2.28
Cdx2P43241 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
Cdx2P43241 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
Cdx2P43241 Gm10092-201ENSMUST00000077110 180 ntBASIC0.81□□□□□ -2.28
Cdx2P43241 Snord96a-201ENSMUST00000082791 81 ntBASIC0.81□□□□□ -2.28
Cdx2P43241 Gm24920-201ENSMUST00000083018 85 ntBASIC0.81□□□□□ -2.28
Cdx2P43241 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.81□□□□□ -2.28
Cdx2P43241 Gm24579-201ENSMUST00000103964 144 ntBASIC0.8□□□□□ -2.28
Cdx2P43241 Gm24431-201ENSMUST00000104073 66 ntBASIC0.8□□□□□ -2.28
Cdx2P43241 Gm22027-201ENSMUST00000122737 127 ntBASIC0.8□□□□□ -2.28
Cdx2P43241 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC0.8□□□□□ -2.28
Cdx2P43241 Gm26150-201ENSMUST00000157426 151 ntBASIC0.8□□□□□ -2.28
Cdx2P43241 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC0.8□□□□□ -2.28
Cdx2P43241 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC0.8□□□□□ -2.28
Cdx2P43241 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC0.8□□□□□ -2.28
Cdx2P43241 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC0.8□□□□□ -2.28
Cdx2P43241 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC0.8□□□□□ -2.28
Cdx2P43241 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC0.8□□□□□ -2.28
Cdx2P43241 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC0.8□□□□□ -2.28
Cdx2P43241 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC0.8□□□□□ -2.28
Cdx2P43241 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
Cdx2P43241 Mir6355-201ENSMUST00000183687 106 ntBASIC0.8□□□□□ -2.28
Cdx2P43241 Mir6380-201ENSMUST00000184334 81 ntBASIC0.8□□□□□ -2.28
Cdx2P43241 Gm28862-201ENSMUST00000188246 163 ntBASIC0.8□□□□□ -2.28
Cdx2P43241 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC0.8□□□□□ -2.28
Cdx2P43241 Gm18971-201ENSMUST00000197240 374 ntBASIC0.8□□□□□ -2.28
Cdx2P43241 Mir219b-201ENSMUST00000198317 65 ntBASIC0.8□□□□□ -2.28
Cdx2P43241 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC0.8□□□□□ -2.28
Cdx2P43241 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.8□□□□□ -2.28
Cdx2P43241 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
Cdx2P43241 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC0.79□□□□□ -2.28
Cdx2P43241 Gm13356-201ENSMUST00000121678 335 ntBASIC0.79□□□□□ -2.28
Cdx2P43241 Gm26271-201ENSMUST00000158349 104 ntBASIC0.79□□□□□ -2.28
Cdx2P43241 Gm26405-201ENSMUST00000158495 100 ntBASIC0.79□□□□□ -2.28
Cdx2P43241 Gm24366-201ENSMUST00000175383 86 ntBASIC0.79□□□□□ -2.28
Cdx2P43241 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC0.79□□□□□ -2.28
Cdx2P43241 Gm28956-201ENSMUST00000189047 427 ntBASIC0.79□□□□□ -2.28
Cdx2P43241 Gm17771-201ENSMUST00000194477 1147 ntBASIC0.79□□□□□ -2.28
Cdx2P43241 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC0.79□□□□□ -2.28
Cdx2P43241 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC0.79□□□□□ -2.28
Cdx2P43241 Gm44446-201ENSMUST00000204864 255 ntBASIC0.79□□□□□ -2.28
Cdx2P43241 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
Cdx2P43241 Gm24536-201ENSMUST00000083144 107 ntBASIC0.79□□□□□ -2.28
Cdx2P43241 Mir452-201ENSMUST00000093629 85 ntBASIC0.79□□□□□ -2.28
Cdx2P43241 Gm43706-201ENSMUST00000198767 2652 ntBASIC0.79□□□□□ -2.28
Cdx2P43241 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
Cdx2P43241 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 218.8 ms