Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm28435-201ENSMUST00000185496 108 ntBASIC-0.27□□□□□ -2.45
HttP42859 Gm20058-201ENSMUST00000186939 284 ntBASIC-0.27□□□□□ -2.45
HttP42859 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC-0.27□□□□□ -2.45
HttP42859 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC-0.27□□□□□ -2.45
HttP42859 Gm13885-201ENSMUST00000117569 187 ntBASIC-0.27□□□□□ -2.45
HttP42859 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC-0.27□□□□□ -2.45
HttP42859 n-R5s189-201ENSMUST00000122675 114 ntBASIC-0.27□□□□□ -2.45
HttP42859 Gm29613-201ENSMUST00000185846 313 ntBASIC-0.27□□□□□ -2.45
HttP42859 Gm29544-201ENSMUST00000188860 313 ntBASIC-0.27□□□□□ -2.45
HttP42859 Gm28808-201ENSMUST00000190978 313 ntBASIC-0.27□□□□□ -2.45
HttP42859 Gm29014-201ENSMUST00000191422 326 ntBASIC-0.27□□□□□ -2.45
HttP42859 Gm37330-201ENSMUST00000192606 153 ntBASIC-0.27□□□□□ -2.45
HttP42859 Gm37002-201ENSMUST00000194560 373 ntBASIC-0.27□□□□□ -2.45
HttP42859 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC-0.27□□□□□ -2.45
HttP42859 Gm14792-201ENSMUST00000119725 258 ntBASIC-0.27□□□□□ -2.45
HttP42859 Gm13341-201ENSMUST00000120780 672 ntBASIC-0.27□□□□□ -2.45
HttP42859 Snord11-201ENSMUST00000158468 84 ntBASIC-0.27□□□□□ -2.45
HttP42859 Gm24925-201ENSMUST00000178157 107 ntBASIC-0.27□□□□□ -2.45
HttP42859 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.28□□□□□ -2.45
HttP42859 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC-0.28□□□□□ -2.45
HttP42859 Gm14392-201ENSMUST00000120332 401 ntBASIC-0.28□□□□□ -2.45
HttP42859 Gm14413-201ENSMUST00000122158 408 ntBASIC-0.28□□□□□ -2.45
HttP42859 Mir7218-201ENSMUST00000200050 59 ntBASIC-0.28□□□□□ -2.45
HttP42859 Gm45730-201ENSMUST00000212560 395 ntBASIC-0.28□□□□□ -2.45
HttP42859 AC138667.2-201ENSMUST00000224880 598 ntBASIC-0.28□□□□□ -2.45
HttP42859 Gm26081-201ENSMUST00000104068 132 ntBASIC-0.29□□□□□ -2.46
HttP42859 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC-0.29□□□□□ -2.46
HttP42859 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC-0.29□□□□□ -2.46
HttP42859 Gm28000-201ENSMUST00000184380 85 ntBASIC-0.29□□□□□ -2.46
HttP42859 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC-0.29□□□□□ -2.46
HttP42859 Gm44564-201ENSMUST00000207985 180 ntBASIC-0.29□□□□□ -2.46
HttP42859 Gm8940-201ENSMUST00000212585 219 ntBASIC-0.29□□□□□ -2.46
HttP42859 AL669916.3-201ENSMUST00000213855 94 ntBASIC-0.29□□□□□ -2.46
HttP42859 AL669916.6-201ENSMUST00000214610 94 ntBASIC-0.29□□□□□ -2.46
HttP42859 AL669916.4-201ENSMUST00000215976 94 ntBASIC-0.29□□□□□ -2.46
HttP42859 AL669916.1-201ENSMUST00000217640 94 ntBASIC-0.29□□□□□ -2.46
HttP42859 AC154262.1-201ENSMUST00000225976 286 ntBASIC-0.29□□□□□ -2.46
HttP42859 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC-0.29□□□□□ -2.46
HttP42859 Mir429-201ENSMUST00000083493 83 ntBASIC-0.29□□□□□ -2.46
HttP42859 Gm24833-201ENSMUST00000116775 120 ntBASIC-0.29□□□□□ -2.46
HttP42859 Gm14554-201ENSMUST00000119548 661 ntBASIC-0.29□□□□□ -2.46
HttP42859 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC-0.29□□□□□ -2.46
HttP42859 Gm23956-201ENSMUST00000157211 119 ntBASIC-0.29□□□□□ -2.46
HttP42859 Gm24086-201ENSMUST00000175171 98 ntBASIC-0.29□□□□□ -2.46
HttP42859 Gm23419-201ENSMUST00000175523 84 ntBASIC-0.29□□□□□ -2.46
HttP42859 Gm44459-201ENSMUST00000203926 160 ntBASIC-0.29□□□□□ -2.46
HttP42859 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.29□□□□□ -2.46
HttP42859 Gm23246-201ENSMUST00000083371 67 ntBASIC-0.29□□□□□ -2.46
HttP42859 AC154515.1-201ENSMUST00000226085 2841 ntBASIC-0.29□□□□□ -2.46
HttP42859 Gm12640-201ENSMUST00000120097 310 ntBASIC-0.29□□□□□ -2.46
HttP42859 Gm16539-201ENSMUST00000160086 327 ntBASIC-0.29□□□□□ -2.46
HttP42859 Gm26914-201ENSMUST00000182262 223 ntBASIC-0.29□□□□□ -2.46
HttP42859 Gm44977-201ENSMUST00000205283 420 ntBASIC-0.29□□□□□ -2.46
HttP42859 Gm29344-201ENSMUST00000068143 210 ntBASIC-0.29□□□□□ -2.46
HttP42859 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC-0.29□□□□□ -2.46
HttP42859 Gm14795-201ENSMUST00000118461 471 ntBASIC-0.3□□□□□ -2.46
HttP42859 Gm7429-201ENSMUST00000118664 348 ntBASIC-0.3□□□□□ -2.46
HttP42859 n-R5s63-201ENSMUST00000122756 103 ntBASIC-0.3□□□□□ -2.46
HttP42859 Gm27588-201ENSMUST00000185096 263 ntBASIC-0.3□□□□□ -2.46
HttP42859 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC-0.3□□□□□ -2.46
HttP42859 Gm25099-201ENSMUST00000093716 116 ntBASIC-0.3□□□□□ -2.46
HttP42859 Gm19428-201ENSMUST00000220512 1995 ntBASIC-0.3□□□□□ -2.46
HttP42859 Mir1899-201ENSMUST00000122798 96 ntBASIC-0.3□□□□□ -2.46
HttP42859 Gm7846-201ENSMUST00000145844 274 ntBASIC-0.3□□□□□ -2.46
HttP42859 Gm9156-201ENSMUST00000189660 463 ntBASIC-0.3□□□□□ -2.46
HttP42859 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC-0.3□□□□□ -2.46
HttP42859 Gm45541-201ENSMUST00000210443 54 ntBASIC-0.3□□□□□ -2.46
HttP42859 AC147240.1-201ENSMUST00000218767 431 ntBASIC-0.3□□□□□ -2.46
HttP42859 Gm14411-201ENSMUST00000121798 914 ntBASIC-0.31□□□□□ -2.46
HttP42859 Gm23197-201ENSMUST00000158809 112 ntBASIC-0.31□□□□□ -2.46
HttP42859 Gm37578-201ENSMUST00000192256 1177 ntBASIC-0.31□□□□□ -2.46
HttP42859 Gm23370-202ENSMUST00000197008 129 ntBASIC-0.31□□□□□ -2.46
HttP42859 Gm45965-201ENSMUST00000221192 1284 ntBASIC-0.31□□□□□ -2.46
HttP42859 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC-0.31□□□□□ -2.46
HttP42859 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC-0.31□□□□□ -2.46
HttP42859 Gm23415-201ENSMUST00000175519 83 ntBASIC-0.31□□□□□ -2.46
HttP42859 Gm28666-201ENSMUST00000186649 274 ntBASIC-0.31□□□□□ -2.46
HttP42859 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC-0.31□□□□□ -2.46
HttP42859 AC155314.1-201ENSMUST00000227624 508 ntBASIC-0.31□□□□□ -2.46
HttP42859 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC-0.31□□□□□ -2.46
HttP42859 n-R5s187-201ENSMUST00000122769 111 ntBASIC-0.31□□□□□ -2.46
HttP42859 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC-0.31□□□□□ -2.46
HttP42859 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC-0.31□□□□□ -2.46
HttP42859 Mir3079-201ENSMUST00000175428 90 ntBASIC-0.31□□□□□ -2.46
HttP42859 AC137950.3-201ENSMUST00000228250 246 ntBASIC-0.31□□□□□ -2.46
HttP42859 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.32□□□□□ -2.46
HttP42859 Gm25391-201ENSMUST00000157342 134 ntBASIC-0.32□□□□□ -2.46
HttP42859 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC-0.32□□□□□ -2.46
HttP42859 Gm23523-201ENSMUST00000180190 107 ntBASIC-0.32□□□□□ -2.46
HttP42859 Gm44403-201ENSMUST00000198554 129 ntBASIC-0.32□□□□□ -2.46
HttP42859 Gm45023-201ENSMUST00000207951 379 ntBASIC-0.32□□□□□ -2.46
HttP42859 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC-0.32□□□□□ -2.46
HttP42859 Gm43007-201ENSMUST00000197618 291 ntBASIC-0.32□□□□□ -2.46
HttP42859 Gm44524-201ENSMUST00000203899 271 ntBASIC-0.32□□□□□ -2.46
HttP42859 Gm19709-201ENSMUST00000215403 482 ntBASIC-0.32□□□□□ -2.46
HttP42859 Gm9795-201ENSMUST00000062156 693 ntBASIC-0.32□□□□□ -2.46
HttP42859 Gm23727-201ENSMUST00000083352 164 ntBASIC-0.32□□□□□ -2.46
HttP42859 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC-0.33□□□□□ -2.46
HttP42859 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC-0.33□□□□□ -2.46
HttP42859 AC164297.1-201ENSMUST00000224484 1561 ntBASIC-0.33□□□□□ -2.46
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms