Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC2.24□□□□□ -2.05
Traf1P39428 Gm42622-201ENSMUST00000197229 355 ntBASIC2.24□□□□□ -2.05
Traf1P39428 Gm44482-201ENSMUST00000199232 103 ntBASIC2.24□□□□□ -2.05
Traf1P39428 Gm38395-201ENSMUST00000199904 830 ntBASIC2.24□□□□□ -2.05
Traf1P39428 Gm46312-201ENSMUST00000220961 420 ntBASIC2.24□□□□□ -2.05
Traf1P39428 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.24□□□□□ -2.05
Traf1P39428 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Traf1P39428 Gm23614-201ENSMUST00000082598 107 ntBASIC2.24□□□□□ -2.05
Traf1P39428 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Traf1P39428 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.24□□□□□ -2.05
Traf1P39428 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Traf1P39428 Gm12926-201ENSMUST00000121158 409 ntBASIC2.23□□□□□ -2.05
Traf1P39428 Gm23670-201ENSMUST00000157469 119 ntBASIC2.23□□□□□ -2.05
Traf1P39428 Gm22316-201ENSMUST00000158012 216 ntBASIC2.23□□□□□ -2.05
Traf1P39428 Gm25486-201ENSMUST00000158726 63 ntBASIC2.23□□□□□ -2.05
Traf1P39428 Mir3569-201ENSMUST00000185080 58 ntBASIC2.23□□□□□ -2.05
Traf1P39428 Snord43-201ENSMUST00000199549 108 ntBASIC2.23□□□□□ -2.05
Traf1P39428 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.23□□□□□ -2.05
Traf1P39428 Gm25579-201ENSMUST00000083407 106 ntBASIC2.23□□□□□ -2.05
Traf1P39428 Gm24412-201ENSMUST00000083426 109 ntBASIC2.23□□□□□ -2.05
Traf1P39428 Mir301-201ENSMUST00000083655 86 ntBASIC2.23□□□□□ -2.05
Traf1P39428 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Traf1P39428 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Traf1P39428 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Traf1P39428 Gm23010-201ENSMUST00000104151 126 ntBASIC2.22□□□□□ -2.05
Traf1P39428 Gm22713-201ENSMUST00000116895 130 ntBASIC2.22□□□□□ -2.05
Traf1P39428 Gm24896-201ENSMUST00000122741 135 ntBASIC2.22□□□□□ -2.05
Traf1P39428 Gm15692-201ENSMUST00000152173 352 ntBASIC2.22□□□□□ -2.05
Traf1P39428 Gm23043-201ENSMUST00000157890 109 ntBASIC2.22□□□□□ -2.05
Traf1P39428 Gm25658-201ENSMUST00000158472 128 ntBASIC2.22□□□□□ -2.05
Traf1P39428 Gm3027-201ENSMUST00000167579 451 ntBASIC2.22□□□□□ -2.05
Traf1P39428 Gm24085-201ENSMUST00000175172 116 ntBASIC2.22□□□□□ -2.05
Traf1P39428 Gm25121-201ENSMUST00000179846 79 ntBASIC2.22□□□□□ -2.05
Traf1P39428 Mir7678-201ENSMUST00000185076 71 ntBASIC2.22□□□□□ -2.05
Traf1P39428 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.22□□□□□ -2.05
Traf1P39428 Mir151-201ENSMUST00000083678 68 ntBASIC2.22□□□□□ -2.05
Traf1P39428 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Traf1P39428 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.05
Traf1P39428 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.21□□□□□ -2.06
Traf1P39428 Gm27926-201ENSMUST00000157180 66 ntBASIC2.21□□□□□ -2.06
Traf1P39428 Gm37128-201ENSMUST00000192599 232 ntBASIC2.21□□□□□ -2.06
Traf1P39428 Gm38041-201ENSMUST00000194445 661 ntBASIC2.21□□□□□ -2.06
Traf1P39428 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Traf1P39428 Gm44128-201ENSMUST00000204909 219 ntBASIC2.21□□□□□ -2.06
Traf1P39428 Gm45403-201ENSMUST00000209453 276 ntBASIC2.21□□□□□ -2.06
Traf1P39428 Gm25113-201ENSMUST00000157185 143 ntBASIC2.2□□□□□ -2.06
Traf1P39428 Gm7953-201ENSMUST00000168278 469 ntBASIC2.2□□□□□ -2.06
Traf1P39428 Gm25994-201ENSMUST00000175392 101 ntBASIC2.2□□□□□ -2.06
Traf1P39428 Mir7225-201ENSMUST00000184178 54 ntBASIC2.2□□□□□ -2.06
Traf1P39428 Gm29005-201ENSMUST00000186773 320 ntBASIC2.2□□□□□ -2.06
Traf1P39428 Gm18357-201ENSMUST00000188184 580 ntBASIC2.2□□□□□ -2.06
Traf1P39428 Gm28927-201ENSMUST00000191528 272 ntBASIC2.2□□□□□ -2.06
Traf1P39428 Gm37778-201ENSMUST00000191732 190 ntBASIC2.2□□□□□ -2.06
Traf1P39428 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.2□□□□□ -2.06
Traf1P39428 Gm44429-201ENSMUST00000203542 186 ntBASIC2.2□□□□□ -2.06
Traf1P39428 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.2□□□□□ -2.06
Traf1P39428 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.2□□□□□ -2.06
Traf1P39428 AC133156.1-202ENSMUST00000227284 363 ntBASIC2.2□□□□□ -2.06
Traf1P39428 Mir107-201ENSMUST00000083660 87 ntBASIC2.2□□□□□ -2.06
Traf1P39428 Gm3867-201ENSMUST00000086108 279 ntBASIC2.2□□□□□ -2.06
Traf1P39428 Gm45557-201ENSMUST00000210004 1651 ntBASIC2.2□□□□□ -2.06
Traf1P39428 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.19□□□□□ -2.06
Traf1P39428 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
Traf1P39428 Gm14709-201ENSMUST00000121225 304 ntBASIC2.19□□□□□ -2.06
Traf1P39428 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC2.19□□□□□ -2.06
Traf1P39428 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.19□□□□□ -2.06
Traf1P39428 Gm44938-201ENSMUST00000208614 427 ntBASIC2.19□□□□□ -2.06
Traf1P39428 Snora33-201ENSMUST00000093556 129 ntBASIC2.19□□□□□ -2.06
Traf1P39428 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.19□□□□□ -2.06
Traf1P39428 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.19□□□□□ -2.06
Traf1P39428 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
Traf1P39428 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC2.18□□□□□ -2.06
Traf1P39428 Mir1949-201ENSMUST00000157434 141 ntBASIC2.18□□□□□ -2.06
Traf1P39428 Gm24783-201ENSMUST00000157639 100 ntBASIC2.18□□□□□ -2.06
Traf1P39428 Gm22731-201ENSMUST00000158086 94 ntBASIC2.18□□□□□ -2.06
Traf1P39428 Gm24726-201ENSMUST00000158232 121 ntBASIC2.18□□□□□ -2.06
Traf1P39428 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.18□□□□□ -2.06
Traf1P39428 Gm19932-201ENSMUST00000177033 313 ntBASIC2.18□□□□□ -2.06
Traf1P39428 Gm23191-201ENSMUST00000179147 107 ntBASIC2.18□□□□□ -2.06
Traf1P39428 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.18□□□□□ -2.06
Traf1P39428 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Traf1P39428 Gm42960-201ENSMUST00000202160 241 ntBASIC2.18□□□□□ -2.06
Traf1P39428 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.18□□□□□ -2.06
Traf1P39428 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.18□□□□□ -2.06
Traf1P39428 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.18□□□□□ -2.06
Traf1P39428 AC167669.4-201ENSMUST00000225967 140 ntBASIC2.18□□□□□ -2.06
Traf1P39428 Gm23627-201ENSMUST00000082459 107 ntBASIC2.18□□□□□ -2.06
Traf1P39428 Gm22502-201ENSMUST00000082488 107 ntBASIC2.18□□□□□ -2.06
Traf1P39428 Gm22977-201ENSMUST00000082615 107 ntBASIC2.18□□□□□ -2.06
Traf1P39428 Gm25801-201ENSMUST00000082638 106 ntBASIC2.18□□□□□ -2.06
Traf1P39428 Gm24165-201ENSMUST00000082718 128 ntBASIC2.18□□□□□ -2.06
Traf1P39428 Gm24149-201ENSMUST00000082757 107 ntBASIC2.18□□□□□ -2.06
Traf1P39428 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.18□□□□□ -2.06
Traf1P39428 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Traf1P39428 Gm11786-201ENSMUST00000120799 155 ntBASIC2.17□□□□□ -2.06
Traf1P39428 Gm24478-201ENSMUST00000157439 158 ntBASIC2.17□□□□□ -2.06
Traf1P39428 Gm23120-201ENSMUST00000157654 287 ntBASIC2.17□□□□□ -2.06
Traf1P39428 Gm22338-201ENSMUST00000157715 129 ntBASIC2.17□□□□□ -2.06
Traf1P39428 Gm24333-201ENSMUST00000175101 84 ntBASIC2.17□□□□□ -2.06
Traf1P39428 Gm37337-201ENSMUST00000192601 993 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 149.8 ms