Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC3.03□□□□□ -1.92
LdlrP35951 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
LdlrP35951 Gm27220-201ENSMUST00000183453 262 ntBASIC3.03□□□□□ -1.92
LdlrP35951 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.03□□□□□ -1.92
LdlrP35951 Gm23370-202ENSMUST00000197008 129 ntBASIC3.03□□□□□ -1.92
LdlrP35951 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC3.03□□□□□ -1.92
LdlrP35951 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
LdlrP35951 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.03□□□□□ -1.92
LdlrP35951 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC3.03□□□□□ -1.92
LdlrP35951 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC3.03□□□□□ -1.93
LdlrP35951 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
LdlrP35951 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
LdlrP35951 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
LdlrP35951 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.02□□□□□ -1.93
LdlrP35951 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.02□□□□□ -1.93
LdlrP35951 Gm12550-201ENSMUST00000118478 329 ntBASIC3.02□□□□□ -1.93
LdlrP35951 Gm24959-201ENSMUST00000157924 146 ntBASIC3.02□□□□□ -1.93
LdlrP35951 Gm22097-201ENSMUST00000157929 278 ntBASIC3.02□□□□□ -1.93
LdlrP35951 Gm22316-201ENSMUST00000158012 216 ntBASIC3.02□□□□□ -1.93
LdlrP35951 Gm22767-201ENSMUST00000158365 165 ntBASIC3.02□□□□□ -1.93
LdlrP35951 Mir1a-2-201ENSMUST00000198520 72 ntBASIC3.02□□□□□ -1.93
LdlrP35951 Gm43746-201ENSMUST00000200028 317 ntBASIC3.02□□□□□ -1.93
LdlrP35951 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
LdlrP35951 Gm44223-201ENSMUST00000204854 114 ntBASIC3.02□□□□□ -1.93
LdlrP35951 Gm44563-201ENSMUST00000207958 178 ntBASIC3.02□□□□□ -1.93
LdlrP35951 AC124182.1-201ENSMUST00000227091 321 ntBASIC3.02□□□□□ -1.93
LdlrP35951 Gm22249-201ENSMUST00000082485 136 ntBASIC3.02□□□□□ -1.93
LdlrP35951 Gm25813-201ENSMUST00000082748 191 ntBASIC3.02□□□□□ -1.93
LdlrP35951 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
LdlrP35951 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
LdlrP35951 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
LdlrP35951 Gm12934-201ENSMUST00000119221 343 ntBASIC3.01□□□□□ -1.93
LdlrP35951 Gm25321-201ENSMUST00000122558 102 ntBASIC3.01□□□□□ -1.93
LdlrP35951 Gm26215-201ENSMUST00000158584 139 ntBASIC3.01□□□□□ -1.93
LdlrP35951 Mir3092-201ENSMUST00000174954 96 ntBASIC3.01□□□□□ -1.93
LdlrP35951 Gm27783-201ENSMUST00000183534 105 ntBASIC3.01□□□□□ -1.93
LdlrP35951 Gm29602-201ENSMUST00000186887 442 ntBASIC3.01□□□□□ -1.93
LdlrP35951 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC3.01□□□□□ -1.93
LdlrP35951 Gm28650-201ENSMUST00000188413 411 ntBASIC3.01□□□□□ -1.93
LdlrP35951 Trbv6-201ENSMUST00000193743 276 ntBASIC3.01□□□□□ -1.93
LdlrP35951 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC3.01□□□□□ -1.93
LdlrP35951 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC3.01□□□□□ -1.93
LdlrP35951 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC3.01□□□□□ -1.93
LdlrP35951 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC3.01□□□□□ -1.93
LdlrP35951 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
LdlrP35951 Mir146-201ENSMUST00000083667 65 ntBASIC3.01□□□□□ -1.93
LdlrP35951 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
LdlrP35951 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
LdlrP35951 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.01□□□□□ -1.93
LdlrP35951 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
LdlrP35951 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
LdlrP35951 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LdlrP35951 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
LdlrP35951 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3□□□□□ -1.93
LdlrP35951 Gm11471-201ENSMUST00000121824 198 ntBASIC3□□□□□ -1.93
LdlrP35951 Gm25269-201ENSMUST00000122601 104 ntBASIC3□□□□□ -1.93
LdlrP35951 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3□□□□□ -1.93
LdlrP35951 Gm14389-201ENSMUST00000140453 241 ntBASIC3□□□□□ -1.93
LdlrP35951 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC3□□□□□ -1.93
LdlrP35951 Gm22225-201ENSMUST00000157358 278 ntBASIC3□□□□□ -1.93
LdlrP35951 Gm22883-201ENSMUST00000157376 106 ntBASIC3□□□□□ -1.93
LdlrP35951 Gm22516-201ENSMUST00000158266 124 ntBASIC3□□□□□ -1.93
LdlrP35951 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3□□□□□ -1.93
LdlrP35951 Gm27893-201ENSMUST00000184408 194 ntBASIC3□□□□□ -1.93
LdlrP35951 Gm19901-201ENSMUST00000192191 495 ntBASIC3□□□□□ -1.93
LdlrP35951 Gm42623-201ENSMUST00000197225 379 ntBASIC3□□□□□ -1.93
LdlrP35951 Gm43680-201ENSMUST00000199466 340 ntBASIC3□□□□□ -1.93
LdlrP35951 Gm30534-201ENSMUST00000217928 207 ntBASIC3□□□□□ -1.93
LdlrP35951 AC124537.1-201ENSMUST00000222890 159 ntBASIC3□□□□□ -1.93
LdlrP35951 AC098718.2-201ENSMUST00000226822 285 ntBASIC3□□□□□ -1.93
LdlrP35951 AC164100.1-201ENSMUST00000227214 508 ntBASIC3□□□□□ -1.93
LdlrP35951 Gm25812-201ENSMUST00000082751 103 ntBASIC3□□□□□ -1.93
LdlrP35951 Mir384-201ENSMUST00000083565 88 ntBASIC3□□□□□ -1.93
LdlrP35951 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LdlrP35951 AC122850.1-201ENSMUST00000220380 5690 ntBASIC2.99□□□□□ -1.93
LdlrP35951 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LdlrP35951 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
LdlrP35951 Gm14073-201ENSMUST00000117344 381 ntBASIC2.99□□□□□ -1.93
LdlrP35951 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.99□□□□□ -1.93
LdlrP35951 Gm25494-201ENSMUST00000158143 100 ntBASIC2.99□□□□□ -1.93
LdlrP35951 Gm24131-201ENSMUST00000158539 107 ntBASIC2.99□□□□□ -1.93
LdlrP35951 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.99□□□□□ -1.93
LdlrP35951 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.99□□□□□ -1.93
LdlrP35951 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC2.99□□□□□ -1.93
LdlrP35951 Gm42774-201ENSMUST00000198854 283 ntBASIC2.99□□□□□ -1.93
LdlrP35951 AC140254.1-201ENSMUST00000220063 331 ntBASIC2.99□□□□□ -1.93
LdlrP35951 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.99□□□□□ -1.93
LdlrP35951 Mir184-201ENSMUST00000083662 69 ntBASIC2.99□□□□□ -1.93
LdlrP35951 Gm10360-201ENSMUST00000097219 272 ntBASIC2.99□□□□□ -1.93
LdlrP35951 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
LdlrP35951 Gm14416-201ENSMUST00000118630 2308 ntBASIC2.99□□□□□ -1.93
LdlrP35951 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
LdlrP35951 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC2.99□□□□□ -1.93
LdlrP35951 Gm42675-201ENSMUST00000197552 4035 ntBASIC2.98□□□□□ -1.93
LdlrP35951 Gm22939-201ENSMUST00000103958 131 ntBASIC2.98□□□□□ -1.93
LdlrP35951 Gm14402-201ENSMUST00000122217 508 ntBASIC2.98□□□□□ -1.93
LdlrP35951 Gm22322-201ENSMUST00000157151 111 ntBASIC2.98□□□□□ -1.93
LdlrP35951 Gm24015-201ENSMUST00000157725 232 ntBASIC2.98□□□□□ -1.93
LdlrP35951 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC2.98□□□□□ -1.93
LdlrP35951 Gm28358-202ENSMUST00000189292 223 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms