Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.53□□□□□ -2.16
P20040 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.53□□□□□ -2.16
P20040 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
P20040 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
P20040 Gm22683-201ENSMUST00000082854 137 ntBASIC1.53□□□□□ -2.16
P20040 Gm10360-201ENSMUST00000097219 272 ntBASIC1.53□□□□□ -2.16
P20040 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
P20040 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
P20040 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
P20040 Gm22603-201ENSMUST00000157603 96 ntBASIC1.52□□□□□ -2.17
P20040 Gm26024-201ENSMUST00000158657 322 ntBASIC1.52□□□□□ -2.17
P20040 Gm32175-201ENSMUST00000193641 346 ntBASIC1.52□□□□□ -2.17
P20040 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC1.52□□□□□ -2.17
P20040 Ear14-201ENSMUST00000049559 468 ntBASIC1.52□□□□□ -2.17
P20040 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
P20040 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.51□□□□□ -2.17
P20040 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC1.51□□□□□ -2.17
P20040 Gm23181-201ENSMUST00000158685 110 ntBASIC1.51□□□□□ -2.17
P20040 Gm22011-201ENSMUST00000158790 123 ntBASIC1.51□□□□□ -2.17
P20040 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
P20040 Mir7679-201ENSMUST00000183379 63 ntBASIC1.51□□□□□ -2.17
P20040 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
P20040 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.51□□□□□ -2.17
P20040 Gm44429-201ENSMUST00000203542 186 ntBASIC1.51□□□□□ -2.17
P20040 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.51□□□□□ -2.17
P20040 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC1.51□□□□□ -2.17
P20040 Gm44655-201ENSMUST00000207768 423 ntBASIC1.51□□□□□ -2.17
P20040 AC164297.3-201ENSMUST00000224238 94 ntBASIC1.51□□□□□ -2.17
P20040 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
P20040 Gm24805-201ENSMUST00000082931 104 ntBASIC1.51□□□□□ -2.17
P20040 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
P20040 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
P20040 Gm23010-201ENSMUST00000104151 126 ntBASIC1.5□□□□□ -2.17
P20040 Gm25421-201ENSMUST00000104218 164 ntBASIC1.5□□□□□ -2.17
P20040 Gm24079-201ENSMUST00000104352 132 ntBASIC1.5□□□□□ -2.17
P20040 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC1.5□□□□□ -2.17
P20040 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.5□□□□□ -2.17
P20040 Gm12748-201ENSMUST00000120763 504 ntBASIC1.5□□□□□ -2.17
P20040 Gm14678-201ENSMUST00000121396 482 ntBASIC1.5□□□□□ -2.17
P20040 Gm12770-201ENSMUST00000121734 462 ntBASIC1.5□□□□□ -2.17
P20040 Gm23120-201ENSMUST00000157654 287 ntBASIC1.5□□□□□ -2.17
P20040 Gm17148-201ENSMUST00000164702 249 ntBASIC1.5□□□□□ -2.17
P20040 Gm43245-201ENSMUST00000197603 468 ntBASIC1.5□□□□□ -2.17
P20040 Gm45296-201ENSMUST00000209625 205 ntBASIC1.5□□□□□ -2.17
P20040 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.5□□□□□ -2.17
P20040 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.5□□□□□ -2.17
P20040 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.5□□□□□ -2.17
P20040 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.5□□□□□ -2.17
P20040 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.5□□□□□ -2.17
P20040 AC122393.1-201ENSMUST00000226570 319 ntBASIC1.5□□□□□ -2.17
P20040 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.5□□□□□ -2.17
P20040 Gm25207-201ENSMUST00000093745 107 ntBASIC1.5□□□□□ -2.17
P20040 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
P20040 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
P20040 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
P20040 Mir701-201ENSMUST00000102208 109 ntBASIC1.49□□□□□ -2.17
P20040 Mir669p-2-201ENSMUST00000103868 87 ntBASIC1.49□□□□□ -2.17
P20040 Mir669p-1-201ENSMUST00000103884 87 ntBASIC1.49□□□□□ -2.17
P20040 Gm14674-201ENSMUST00000117816 342 ntBASIC1.49□□□□□ -2.17
P20040 Gm11522-201ENSMUST00000120533 176 ntBASIC1.49□□□□□ -2.17
P20040 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.49□□□□□ -2.17
P20040 Gm23670-201ENSMUST00000157469 119 ntBASIC1.49□□□□□ -2.17
P20040 Gm24394-201ENSMUST00000158141 123 ntBASIC1.49□□□□□ -2.17
P20040 Gm23016-201ENSMUST00000158431 62 ntBASIC1.49□□□□□ -2.17
P20040 Gm16162-201ENSMUST00000162296 297 ntBASIC1.49□□□□□ -2.17
P20040 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.49□□□□□ -2.17
P20040 Gm20477-201ENSMUST00000174028 280 ntBASIC1.49□□□□□ -2.17
P20040 Gm26430-201ENSMUST00000178054 107 ntBASIC1.49□□□□□ -2.17
P20040 Mir6351-201ENSMUST00000183826 99 ntBASIC1.49□□□□□ -2.17
P20040 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC1.49□□□□□ -2.17
P20040 Gm18546-201ENSMUST00000197245 676 ntBASIC1.49□□□□□ -2.17
P20040 Mir1291-201ENSMUST00000199842 117 ntBASIC1.49□□□□□ -2.17
P20040 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.49□□□□□ -2.17
P20040 AL935138.1-201ENSMUST00000215309 196 ntBASIC1.49□□□□□ -2.17
P20040 Gm45815-201ENSMUST00000220241 146 ntBASIC1.49□□□□□ -2.17
P20040 AC130821.1-201ENSMUST00000221997 293 ntBASIC1.49□□□□□ -2.17
P20040 Snora34-201ENSMUST00000083402 138 ntBASIC1.49□□□□□ -2.17
P20040 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.49□□□□□ -2.17
P20040 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.49□□□□□ -2.17
P20040 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.48□□□□□ -2.17
P20040 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.48□□□□□ -2.17
P20040 Gm24726-201ENSMUST00000158232 121 ntBASIC1.48□□□□□ -2.17
P20040 Gm20438-201ENSMUST00000174441 329 ntBASIC1.48□□□□□ -2.17
P20040 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.48□□□□□ -2.17
P20040 Gm23090-201ENSMUST00000177331 78 ntBASIC1.48□□□□□ -2.17
P20040 Gm25314-201ENSMUST00000178810 79 ntBASIC1.48□□□□□ -2.17
P20040 Gm25121-201ENSMUST00000179846 79 ntBASIC1.48□□□□□ -2.17
P20040 Gm29005-201ENSMUST00000186773 320 ntBASIC1.48□□□□□ -2.17
P20040 Gm29657-201ENSMUST00000189807 342 ntBASIC1.48□□□□□ -2.17
P20040 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.48□□□□□ -2.17
P20040 Gm24977-201ENSMUST00000083106 163 ntBASIC1.48□□□□□ -2.17
P20040 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
P20040 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
P20040 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.47□□□□□ -2.17
P20040 Gm23011-201ENSMUST00000104148 132 ntBASIC1.47□□□□□ -2.17
P20040 Gm13432-201ENSMUST00000118861 241 ntBASIC1.47□□□□□ -2.17
P20040 Gm14287-201ENSMUST00000121060 117 ntBASIC1.47□□□□□ -2.17
P20040 Gm22199-201ENSMUST00000122660 126 ntBASIC1.47□□□□□ -2.17
P20040 Gm26652-202ENSMUST00000181672 475 ntBASIC1.47□□□□□ -2.17
P20040 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 99.6 ms