Protein–RNA interactions for Protein: P13705

Msh3, DNA mismatch repair protein Msh3, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3P13705 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.28□□□□□ -2.04
Msh3P13705 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.28□□□□□ -2.04
Msh3P13705 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.28□□□□□ -2.04
Msh3P13705 Gm44024-201ENSMUST00000203008 476 ntBASIC2.28□□□□□ -2.04
Msh3P13705 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC2.28□□□□□ -2.04
Msh3P13705 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.28□□□□□ -2.04
Msh3P13705 AC122905.2-201ENSMUST00000220325 269 ntBASIC2.28□□□□□ -2.04
Msh3P13705 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.28□□□□□ -2.04
Msh3P13705 CT030182.3-201ENSMUST00000225986 582 ntBASIC2.28□□□□□ -2.04
Msh3P13705 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.28□□□□□ -2.04
Msh3P13705 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.05
Msh3P13705 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Msh3P13705 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Msh3P13705 Mir344e-201ENSMUST00000104677 66 ntBASIC2.27□□□□□ -2.05
Msh3P13705 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Msh3P13705 Gm12646-201ENSMUST00000119144 238 ntBASIC2.27□□□□□ -2.05
Msh3P13705 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.27□□□□□ -2.05
Msh3P13705 Gm12785-201ENSMUST00000122052 172 ntBASIC2.27□□□□□ -2.05
Msh3P13705 Gm24892-201ENSMUST00000122747 104 ntBASIC2.27□□□□□ -2.05
Msh3P13705 Gm2830-201ENSMUST00000140330 385 ntBASIC2.27□□□□□ -2.05
Msh3P13705 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC2.27□□□□□ -2.05
Msh3P13705 Gm22727-201ENSMUST00000158090 116 ntBASIC2.27□□□□□ -2.05
Msh3P13705 Gm24726-201ENSMUST00000158232 121 ntBASIC2.27□□□□□ -2.05
Msh3P13705 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.27□□□□□ -2.05
Msh3P13705 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC2.27□□□□□ -2.05
Msh3P13705 Gm44960-201ENSMUST00000207403 141 ntBASIC2.27□□□□□ -2.05
Msh3P13705 AC116460.1-201ENSMUST00000219040 313 ntBASIC2.27□□□□□ -2.05
Msh3P13705 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
Msh3P13705 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Msh3P13705 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Msh3P13705 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Msh3P13705 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
Msh3P13705 Gm26500-201ENSMUST00000101867 106 ntBASIC2.26□□□□□ -2.05
Msh3P13705 Gm26342-201ENSMUST00000104557 129 ntBASIC2.26□□□□□ -2.05
Msh3P13705 Gm13880-201ENSMUST00000118421 474 ntBASIC2.26□□□□□ -2.05
Msh3P13705 Gm16328-201ENSMUST00000126985 196 ntBASIC2.26□□□□□ -2.05
Msh3P13705 Gm16355-201ENSMUST00000128606 231 ntBASIC2.26□□□□□ -2.05
Msh3P13705 Gm25625-201ENSMUST00000157221 96 ntBASIC2.26□□□□□ -2.05
Msh3P13705 Gm23589-201ENSMUST00000157660 105 ntBASIC2.26□□□□□ -2.05
Msh3P13705 Gm22316-201ENSMUST00000158012 216 ntBASIC2.26□□□□□ -2.05
Msh3P13705 Gm23262-201ENSMUST00000158323 168 ntBASIC2.26□□□□□ -2.05
Msh3P13705 Gm25956-201ENSMUST00000175115 217 ntBASIC2.26□□□□□ -2.05
Msh3P13705 Gm24388-201ENSMUST00000177872 107 ntBASIC2.26□□□□□ -2.05
Msh3P13705 Gm25457-201ENSMUST00000179509 107 ntBASIC2.26□□□□□ -2.05
Msh3P13705 Gm28008-201ENSMUST00000184021 186 ntBASIC2.26□□□□□ -2.05
Msh3P13705 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.26□□□□□ -2.05
Msh3P13705 Gm28579-201ENSMUST00000186143 369 ntBASIC2.26□□□□□ -2.05
Msh3P13705 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Msh3P13705 Gm23462-201ENSMUST00000083264 104 ntBASIC2.26□□□□□ -2.05
Msh3P13705 Gm23731-201ENSMUST00000083749 107 ntBASIC2.26□□□□□ -2.05
Msh3P13705 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Msh3P13705 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Msh3P13705 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Msh3P13705 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.25□□□□□ -2.05
Msh3P13705 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
Msh3P13705 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Msh3P13705 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Msh3P13705 Gm9059-201ENSMUST00000118319 183 ntBASIC2.25□□□□□ -2.05
Msh3P13705 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.25□□□□□ -2.05
Msh3P13705 Gm28288-201ENSMUST00000191019 214 ntBASIC2.25□□□□□ -2.05
Msh3P13705 Gm44010-201ENSMUST00000204432 331 ntBASIC2.25□□□□□ -2.05
Msh3P13705 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.25□□□□□ -2.05
Msh3P13705 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Msh3P13705 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.25□□□□□ -2.05
Msh3P13705 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Msh3P13705 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.24□□□□□ -2.05
Msh3P13705 Mdga2-203ENSMUST00000113942 423 ntBASIC2.24□□□□□ -2.05
Msh3P13705 Gm14774-201ENSMUST00000117857 536 ntBASIC2.24□□□□□ -2.05
Msh3P13705 Gm12941-201ENSMUST00000117934 220 ntBASIC2.24□□□□□ -2.05
Msh3P13705 Gm11935-201ENSMUST00000118608 399 ntBASIC2.24□□□□□ -2.05
Msh3P13705 Gm14588-201ENSMUST00000119895 172 ntBASIC2.24□□□□□ -2.05
Msh3P13705 Gm5396-201ENSMUST00000121222 532 ntBASIC2.24□□□□□ -2.05
Msh3P13705 Gm11471-201ENSMUST00000121824 198 ntBASIC2.24□□□□□ -2.05
Msh3P13705 Gm25543-201ENSMUST00000122678 312 ntBASIC2.24□□□□□ -2.05
Msh3P13705 Gm22598-201ENSMUST00000157600 127 ntBASIC2.24□□□□□ -2.05
Msh3P13705 Gm22483-201ENSMUST00000157986 274 ntBASIC2.24□□□□□ -2.05
Msh3P13705 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Msh3P13705 Gm22242-201ENSMUST00000175224 118 ntBASIC2.24□□□□□ -2.05
Msh3P13705 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.24□□□□□ -2.05
Msh3P13705 Gm28848-201ENSMUST00000189984 168 ntBASIC2.24□□□□□ -2.05
Msh3P13705 Gm44419-201ENSMUST00000203338 229 ntBASIC2.24□□□□□ -2.05
Msh3P13705 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.24□□□□□ -2.05
Msh3P13705 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Msh3P13705 Gm22685-201ENSMUST00000082848 106 ntBASIC2.24□□□□□ -2.05
Msh3P13705 Gm26265-201ENSMUST00000083277 135 ntBASIC2.24□□□□□ -2.05
Msh3P13705 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.24□□□□□ -2.05
Msh3P13705 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
Msh3P13705 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
Msh3P13705 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.23□□□□□ -2.05
Msh3P13705 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.23□□□□□ -2.05
Msh3P13705 Gm13432-201ENSMUST00000118861 241 ntBASIC2.23□□□□□ -2.05
Msh3P13705 Gm13729-201ENSMUST00000120328 406 ntBASIC2.23□□□□□ -2.05
Msh3P13705 Mir7068-201ENSMUST00000183439 74 ntBASIC2.23□□□□□ -2.05
Msh3P13705 Mir6399-201ENSMUST00000184050 84 ntBASIC2.23□□□□□ -2.05
Msh3P13705 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC2.23□□□□□ -2.05
Msh3P13705 Gm28995-201ENSMUST00000186625 261 ntBASIC2.23□□□□□ -2.05
Msh3P13705 Gm28951-201ENSMUST00000190742 313 ntBASIC2.23□□□□□ -2.05
Msh3P13705 Gm37338-201ENSMUST00000191986 127 ntBASIC2.23□□□□□ -2.05
Msh3P13705 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Msh3P13705 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.23□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 100.9 ms