Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.7□□□□□ -1.82
RaraP11416 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
RaraP11416 Gm42739-201ENSMUST00000200687 226 ntBASIC3.7□□□□□ -1.82
RaraP11416 Gm24929-201ENSMUST00000083403 139 ntBASIC3.7□□□□□ -1.82
RaraP11416 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
RaraP11416 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
RaraP11416 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.7□□□□□ -1.82
RaraP11416 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
RaraP11416 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
RaraP11416 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
RaraP11416 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.69□□□□□ -1.82
RaraP11416 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.69□□□□□ -1.82
RaraP11416 Gm23559-201ENSMUST00000157824 103 ntBASIC3.69□□□□□ -1.82
RaraP11416 Gm24388-201ENSMUST00000177872 107 ntBASIC3.69□□□□□ -1.82
RaraP11416 Mir7667-201ENSMUST00000183866 63 ntBASIC3.69□□□□□ -1.82
RaraP11416 Gm18486-201ENSMUST00000184040 298 ntBASIC3.69□□□□□ -1.82
RaraP11416 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.69□□□□□ -1.82
RaraP11416 Gm42834-201ENSMUST00000196845 256 ntBASIC3.69□□□□□ -1.82
RaraP11416 Gm9251-201ENSMUST00000197202 628 ntBASIC3.69□□□□□ -1.82
RaraP11416 Gm44052-201ENSMUST00000203382 396 ntBASIC3.69□□□□□ -1.82
RaraP11416 Gm39147-201ENSMUST00000211376 465 ntBASIC3.69□□□□□ -1.82
RaraP11416 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC3.69□□□□□ -1.82
RaraP11416 Gm4036-201ENSMUST00000220842 626 ntBASIC3.69□□□□□ -1.82
RaraP11416 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.69□□□□□ -1.82
RaraP11416 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.69□□□□□ -1.82
RaraP11416 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
RaraP11416 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
RaraP11416 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RaraP11416 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
RaraP11416 Gm7123-201ENSMUST00000117647 213 ntBASIC3.68□□□□□ -1.82
RaraP11416 Gm15268-201ENSMUST00000118845 352 ntBASIC3.68□□□□□ -1.82
RaraP11416 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.68□□□□□ -1.82
RaraP11416 Gm23535-201ENSMUST00000157542 106 ntBASIC3.68□□□□□ -1.82
RaraP11416 Gm23101-201ENSMUST00000157550 137 ntBASIC3.68□□□□□ -1.82
RaraP11416 Gm23865-201ENSMUST00000157723 97 ntBASIC3.68□□□□□ -1.82
RaraP11416 Gm24998-201ENSMUST00000157908 89 ntBASIC3.68□□□□□ -1.82
RaraP11416 Gm25860-201ENSMUST00000158252 126 ntBASIC3.68□□□□□ -1.82
RaraP11416 Gm24213-201ENSMUST00000158255 258 ntBASIC3.68□□□□□ -1.82
RaraP11416 Mir6408-201ENSMUST00000183643 91 ntBASIC3.68□□□□□ -1.82
RaraP11416 Gm45492-201ENSMUST00000211611 288 ntBASIC3.68□□□□□ -1.82
RaraP11416 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.68□□□□□ -1.82
RaraP11416 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.68□□□□□ -1.82
RaraP11416 Snord35b-201ENSMUST00000082833 87 ntBASIC3.68□□□□□ -1.82
RaraP11416 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.68□□□□□ -1.82
RaraP11416 Gm23850-201ENSMUST00000083830 169 ntBASIC3.68□□□□□ -1.82
RaraP11416 Gm22154-201ENSMUST00000083844 131 ntBASIC3.68□□□□□ -1.82
RaraP11416 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
RaraP11416 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
RaraP11416 Snord89-201ENSMUST00000104516 110 ntBASIC3.67□□□□□ -1.82
RaraP11416 Gm14811-201ENSMUST00000117070 117 ntBASIC3.67□□□□□ -1.82
RaraP11416 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.67□□□□□ -1.82
RaraP11416 Gm23230-201ENSMUST00000157298 133 ntBASIC3.67□□□□□ -1.82
RaraP11416 Gm24846-201ENSMUST00000158033 108 ntBASIC3.67□□□□□ -1.82
RaraP11416 Gm22840-201ENSMUST00000158444 136 ntBASIC3.67□□□□□ -1.82
RaraP11416 AC164086.1-201ENSMUST00000221038 289 ntBASIC3.67□□□□□ -1.82
RaraP11416 AC161758.2-201ENSMUST00000228513 218 ntBASIC3.67□□□□□ -1.82
RaraP11416 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RaraP11416 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.67□□□□□ -1.82
RaraP11416 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
RaraP11416 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
RaraP11416 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.66□□□□□ -1.82
RaraP11416 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
RaraP11416 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
RaraP11416 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.66□□□□□ -1.82
RaraP11416 Gm23182-201ENSMUST00000158688 135 ntBASIC3.66□□□□□ -1.82
RaraP11416 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
RaraP11416 Gm4468-201ENSMUST00000170206 294 ntBASIC3.66□□□□□ -1.82
RaraP11416 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.66□□□□□ -1.82
RaraP11416 Gm4479-201ENSMUST00000178807 171 ntBASIC3.66□□□□□ -1.82
RaraP11416 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC3.66□□□□□ -1.82
RaraP11416 Gm37918-201ENSMUST00000192071 120 ntBASIC3.66□□□□□ -1.82
RaraP11416 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.66□□□□□ -1.82
RaraP11416 Igkv11-118-201ENSMUST00000199448 346 ntBASIC3.66□□□□□ -1.82
RaraP11416 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.66□□□□□ -1.82
RaraP11416 Gm8508-201ENSMUST00000061226 363 ntBASIC3.66□□□□□ -1.82
RaraP11416 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.66□□□□□ -1.82
RaraP11416 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RaraP11416 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
RaraP11416 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
RaraP11416 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
RaraP11416 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
RaraP11416 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
RaraP11416 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
RaraP11416 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
RaraP11416 Gm24581-201ENSMUST00000103962 133 ntBASIC3.65□□□□□ -1.83
RaraP11416 Gm6952-201ENSMUST00000118629 159 ntBASIC3.65□□□□□ -1.83
RaraP11416 Mir1936-201ENSMUST00000158699 93 ntBASIC3.65□□□□□ -1.83
RaraP11416 Gm20058-201ENSMUST00000186939 284 ntBASIC3.65□□□□□ -1.83
RaraP11416 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.65□□□□□ -1.83
RaraP11416 Gm11351-202ENSMUST00000225724 478 ntBASIC3.65□□□□□ -1.83
RaraP11416 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.65□□□□□ -1.83
RaraP11416 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RaraP11416 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.64□□□□□ -1.83
RaraP11416 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.64□□□□□ -1.83
RaraP11416 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.64□□□□□ -1.83
RaraP11416 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RaraP11416 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.64□□□□□ -1.83
RaraP11416 Gm13761-201ENSMUST00000117238 807 ntBASIC3.64□□□□□ -1.83
RaraP11416 Gm24878-201ENSMUST00000158782 104 ntBASIC3.64□□□□□ -1.83
RaraP11416 Mir6917-201ENSMUST00000184111 61 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms