Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm43035-201ENSMUST00000197626 517 ntBASIC1.81□□□□□ -2.12
Lire1P11260 Gm43427-201ENSMUST00000198188 331 ntBASIC1.81□□□□□ -2.12
Lire1P11260 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Lire1P11260 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC1.81□□□□□ -2.12
Lire1P11260 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.81□□□□□ -2.12
Lire1P11260 Gm45907-201ENSMUST00000213023 193 ntBASIC1.81□□□□□ -2.12
Lire1P11260 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.81□□□□□ -2.12
Lire1P11260 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.81□□□□□ -2.12
Lire1P11260 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.8□□□□□ -2.12
Lire1P11260 AC133079.1-201ENSMUST00000220943 1881 ntBASIC1.8□□□□□ -2.12
Lire1P11260 Gm14972-201ENSMUST00000121780 364 ntBASIC1.8□□□□□ -2.12
Lire1P11260 Gm24076-201ENSMUST00000158179 94 ntBASIC1.8□□□□□ -2.12
Lire1P11260 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.8□□□□□ -2.12
Lire1P11260 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Lire1P11260 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Lire1P11260 Gm22166-201ENSMUST00000178419 121 ntBASIC1.8□□□□□ -2.12
Lire1P11260 Gm23288-201ENSMUST00000179213 121 ntBASIC1.8□□□□□ -2.12
Lire1P11260 Gm27443-201ENSMUST00000184660 98 ntBASIC1.8□□□□□ -2.12
Lire1P11260 Mir6901-201ENSMUST00000185062 62 ntBASIC1.8□□□□□ -2.12
Lire1P11260 Gm18296-201ENSMUST00000192475 783 ntBASIC1.8□□□□□ -2.12
Lire1P11260 Gm43582-201ENSMUST00000196149 343 ntBASIC1.8□□□□□ -2.12
Lire1P11260 Gm45315-201ENSMUST00000209283 333 ntBASIC1.8□□□□□ -2.12
Lire1P11260 Gm7495-201ENSMUST00000215099 426 ntBASIC1.8□□□□□ -2.12
Lire1P11260 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.8□□□□□ -2.12
Lire1P11260 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.8□□□□□ -2.12
Lire1P11260 Gm10092-201ENSMUST00000077110 180 ntBASIC1.8□□□□□ -2.12
Lire1P11260 Gm26066-201ENSMUST00000083385 109 ntBASIC1.8□□□□□ -2.12
Lire1P11260 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Lire1P11260 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Lire1P11260 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Lire1P11260 Gm12417-201ENSMUST00000119153 403 ntBASIC1.79□□□□□ -2.12
Lire1P11260 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC1.79□□□□□ -2.12
Lire1P11260 Gm25102-201ENSMUST00000122479 112 ntBASIC1.79□□□□□ -2.12
Lire1P11260 Gm22027-201ENSMUST00000122737 127 ntBASIC1.79□□□□□ -2.12
Lire1P11260 Gm16328-201ENSMUST00000126985 196 ntBASIC1.79□□□□□ -2.12
Lire1P11260 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC1.79□□□□□ -2.12
Lire1P11260 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC1.79□□□□□ -2.12
Lire1P11260 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC1.79□□□□□ -2.12
Lire1P11260 Gm27385-201ENSMUST00000184747 104 ntBASIC1.79□□□□□ -2.12
Lire1P11260 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.79□□□□□ -2.12
Lire1P11260 Gm43245-201ENSMUST00000197603 468 ntBASIC1.79□□□□□ -2.12
Lire1P11260 Gm21937-201ENSMUST00000222825 218 ntBASIC1.79□□□□□ -2.12
Lire1P11260 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Lire1P11260 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.79□□□□□ -2.12
Lire1P11260 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.79□□□□□ -2.12
Lire1P11260 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Lire1P11260 Gm25992-201ENSMUST00000102437 109 ntBASIC1.78□□□□□ -2.12
Lire1P11260 Gm11606-201ENSMUST00000120706 617 ntBASIC1.78□□□□□ -2.12
Lire1P11260 Gm24394-201ENSMUST00000158141 123 ntBASIC1.78□□□□□ -2.12
Lire1P11260 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Lire1P11260 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.78□□□□□ -2.12
Lire1P11260 Gm23523-201ENSMUST00000180190 107 ntBASIC1.78□□□□□ -2.12
Lire1P11260 Mir7016-201ENSMUST00000184308 72 ntBASIC1.78□□□□□ -2.12
Lire1P11260 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Lire1P11260 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.78□□□□□ -2.12
Lire1P11260 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.78□□□□□ -2.12
Lire1P11260 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.77□□□□□ -2.13
Lire1P11260 Rnu7-201ENSMUST00000158458 62 ntBASIC1.77□□□□□ -2.13
Lire1P11260 Gm23342-201ENSMUST00000158958 115 ntBASIC1.77□□□□□ -2.13
Lire1P11260 Gm20874-201ENSMUST00000178356 663 ntBASIC1.77□□□□□ -2.13
Lire1P11260 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.77□□□□□ -2.13
Lire1P11260 Gm28995-201ENSMUST00000186625 261 ntBASIC1.77□□□□□ -2.13
Lire1P11260 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC1.77□□□□□ -2.13
Lire1P11260 CT025538.2-201ENSMUST00000226083 772 ntBASIC1.77□□□□□ -2.13
Lire1P11260 Gm24623-201ENSMUST00000082616 194 ntBASIC1.77□□□□□ -2.13
Lire1P11260 Snord118-201ENSMUST00000082965 135 ntBASIC1.77□□□□□ -2.13
Lire1P11260 Snora3-201ENSMUST00000083082 132 ntBASIC1.77□□□□□ -2.13
Lire1P11260 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Lire1P11260 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Lire1P11260 Gm25090-201ENSMUST00000104000 132 ntBASIC1.76□□□□□ -2.13
Lire1P11260 Mir743b-201ENSMUST00000104751 77 ntBASIC1.76□□□□□ -2.13
Lire1P11260 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC1.76□□□□□ -2.13
Lire1P11260 Gm26501-201ENSMUST00000178307 107 ntBASIC1.76□□□□□ -2.13
Lire1P11260 Gm29005-201ENSMUST00000186773 320 ntBASIC1.76□□□□□ -2.13
Lire1P11260 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC1.76□□□□□ -2.13
Lire1P11260 AC134334.1-201ENSMUST00000214277 255 ntBASIC1.76□□□□□ -2.13
Lire1P11260 Mir221-201ENSMUST00000083488 95 ntBASIC1.76□□□□□ -2.13
Lire1P11260 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Lire1P11260 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Lire1P11260 Gm22193-201ENSMUST00000116868 76 ntBASIC1.75□□□□□ -2.13
Lire1P11260 Gm25423-201ENSMUST00000157609 107 ntBASIC1.75□□□□□ -2.13
Lire1P11260 Gm25914-201ENSMUST00000157618 153 ntBASIC1.75□□□□□ -2.13
Lire1P11260 Gm26024-201ENSMUST00000158657 322 ntBASIC1.75□□□□□ -2.13
Lire1P11260 Gm25253-201ENSMUST00000179958 107 ntBASIC1.75□□□□□ -2.13
Lire1P11260 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC1.75□□□□□ -2.13
Lire1P11260 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.75□□□□□ -2.13
Lire1P11260 Gm34073-201ENSMUST00000195736 212 ntBASIC1.75□□□□□ -2.13
Lire1P11260 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.75□□□□□ -2.13
Lire1P11260 Gm44282-201ENSMUST00000203199 190 ntBASIC1.75□□□□□ -2.13
Lire1P11260 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.75□□□□□ -2.13
Lire1P11260 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Lire1P11260 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.75□□□□□ -2.13
Lire1P11260 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.74□□□□□ -2.13
Lire1P11260 Mir301b-201ENSMUST00000102333 97 ntBASIC1.74□□□□□ -2.13
Lire1P11260 Gm23015-201ENSMUST00000104145 128 ntBASIC1.74□□□□□ -2.13
Lire1P11260 Gm23907-201ENSMUST00000104595 189 ntBASIC1.74□□□□□ -2.13
Lire1P11260 Gm14355-201ENSMUST00000117352 264 ntBASIC1.74□□□□□ -2.13
Lire1P11260 Gm23656-201ENSMUST00000122626 112 ntBASIC1.74□□□□□ -2.13
Lire1P11260 Gm26150-201ENSMUST00000157426 151 ntBASIC1.74□□□□□ -2.13
Lire1P11260 Gm22556-201ENSMUST00000157803 100 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms