Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm18546-201ENSMUST00000197245 676 ntBASIC1.52□□□□□ -2.17
Chmp6P0C0A3 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC1.52□□□□□ -2.17
Chmp6P0C0A3 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.52□□□□□ -2.17
Chmp6P0C0A3 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.51□□□□□ -2.17
Chmp6P0C0A3 Gm15861-201ENSMUST00000120979 339 ntBASIC1.51□□□□□ -2.17
Chmp6P0C0A3 Gm6025-201ENSMUST00000121517 201 ntBASIC1.51□□□□□ -2.17
Chmp6P0C0A3 Gm14972-201ENSMUST00000121780 364 ntBASIC1.51□□□□□ -2.17
Chmp6P0C0A3 Gm26049-201ENSMUST00000157313 108 ntBASIC1.51□□□□□ -2.17
Chmp6P0C0A3 Gm20438-201ENSMUST00000174441 329 ntBASIC1.51□□□□□ -2.17
Chmp6P0C0A3 Gm21815-201ENSMUST00000178213 664 ntBASIC1.51□□□□□ -2.17
Chmp6P0C0A3 Gm20874-201ENSMUST00000178356 663 ntBASIC1.51□□□□□ -2.17
Chmp6P0C0A3 Gm22166-201ENSMUST00000178419 121 ntBASIC1.51□□□□□ -2.17
Chmp6P0C0A3 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Chmp6P0C0A3 Gm23288-201ENSMUST00000179213 121 ntBASIC1.51□□□□□ -2.17
Chmp6P0C0A3 Gm23523-201ENSMUST00000180190 107 ntBASIC1.51□□□□□ -2.17
Chmp6P0C0A3 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC1.51□□□□□ -2.17
Chmp6P0C0A3 Gm27385-201ENSMUST00000184747 104 ntBASIC1.51□□□□□ -2.17
Chmp6P0C0A3 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.51□□□□□ -2.17
Chmp6P0C0A3 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC1.51□□□□□ -2.17
Chmp6P0C0A3 Gm44830-201ENSMUST00000207667 584 ntBASIC1.51□□□□□ -2.17
Chmp6P0C0A3 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Chmp6P0C0A3 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.51□□□□□ -2.17
Chmp6P0C0A3 Gm23212-201ENSMUST00000122718 60 ntBASIC1.5□□□□□ -2.17
Chmp6P0C0A3 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC1.5□□□□□ -2.17
Chmp6P0C0A3 Gm22654-201ENSMUST00000157874 105 ntBASIC1.5□□□□□ -2.17
Chmp6P0C0A3 Gm27510-201ENSMUST00000158214 64 ntBASIC1.5□□□□□ -2.17
Chmp6P0C0A3 Gm21754-201ENSMUST00000177550 479 ntBASIC1.5□□□□□ -2.17
Chmp6P0C0A3 Gm28151-201ENSMUST00000189404 951 ntBASIC1.5□□□□□ -2.17
Chmp6P0C0A3 Gm36891-201ENSMUST00000191995 655 ntBASIC1.5□□□□□ -2.17
Chmp6P0C0A3 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.5□□□□□ -2.17
Chmp6P0C0A3 Gm43245-201ENSMUST00000197603 468 ntBASIC1.5□□□□□ -2.17
Chmp6P0C0A3 Gm42857-201ENSMUST00000200823 339 ntBASIC1.5□□□□□ -2.17
Chmp6P0C0A3 Gm26457-201ENSMUST00000082678 78 ntBASIC1.5□□□□□ -2.17
Chmp6P0C0A3 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Chmp6P0C0A3 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Chmp6P0C0A3 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Chmp6P0C0A3 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.49□□□□□ -2.17
Chmp6P0C0A3 Gm9830-201ENSMUST00000178509 357 ntBASIC1.49□□□□□ -2.17
Chmp6P0C0A3 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Chmp6P0C0A3 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC1.49□□□□□ -2.17
Chmp6P0C0A3 Gm44320-201ENSMUST00000199276 86 ntBASIC1.49□□□□□ -2.17
Chmp6P0C0A3 Mir3087-201ENSMUST00000199405 56 ntBASIC1.49□□□□□ -2.17
Chmp6P0C0A3 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC1.49□□□□□ -2.17
Chmp6P0C0A3 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.49□□□□□ -2.17
Chmp6P0C0A3 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Chmp6P0C0A3 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Chmp6P0C0A3 Gm24282-201ENSMUST00000104232 66 ntBASIC1.48□□□□□ -2.17
Chmp6P0C0A3 Gm25541-201ENSMUST00000116888 126 ntBASIC1.48□□□□□ -2.17
Chmp6P0C0A3 Gm23336-201ENSMUST00000117023 123 ntBASIC1.48□□□□□ -2.17
Chmp6P0C0A3 Gm13457-201ENSMUST00000117885 267 ntBASIC1.48□□□□□ -2.17
Chmp6P0C0A3 Gm25102-201ENSMUST00000122479 112 ntBASIC1.48□□□□□ -2.17
Chmp6P0C0A3 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Chmp6P0C0A3 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Chmp6P0C0A3 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC1.48□□□□□ -2.17
Chmp6P0C0A3 Gm26149-201ENSMUST00000157432 108 ntBASIC1.48□□□□□ -2.17
Chmp6P0C0A3 Gm23120-201ENSMUST00000157654 287 ntBASIC1.48□□□□□ -2.17
Chmp6P0C0A3 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC1.48□□□□□ -2.17
Chmp6P0C0A3 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.48□□□□□ -2.17
Chmp6P0C0A3 Mir3057-201ENSMUST00000175040 91 ntBASIC1.48□□□□□ -2.17
Chmp6P0C0A3 Gm22510-201ENSMUST00000179304 79 ntBASIC1.48□□□□□ -2.17
Chmp6P0C0A3 Gm26336-201ENSMUST00000179449 79 ntBASIC1.48□□□□□ -2.17
Chmp6P0C0A3 Gm26390-201ENSMUST00000179628 79 ntBASIC1.48□□□□□ -2.17
Chmp6P0C0A3 Mir195b-201ENSMUST00000184814 97 ntBASIC1.48□□□□□ -2.17
Chmp6P0C0A3 Gm8151-201ENSMUST00000184817 871 ntBASIC1.48□□□□□ -2.17
Chmp6P0C0A3 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Chmp6P0C0A3 Gm29640-201ENSMUST00000187972 278 ntBASIC1.48□□□□□ -2.17
Chmp6P0C0A3 Trbv22-201ENSMUST00000191697 291 ntBASIC1.48□□□□□ -2.17
Chmp6P0C0A3 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.48□□□□□ -2.17
Chmp6P0C0A3 Gm44282-201ENSMUST00000203199 190 ntBASIC1.48□□□□□ -2.17
Chmp6P0C0A3 AC124772.1-201ENSMUST00000221325 151 ntBASIC1.48□□□□□ -2.17
Chmp6P0C0A3 AC144733.1-201ENSMUST00000222893 1289 ntBASIC1.48□□□□□ -2.17
Chmp6P0C0A3 Gm16976-205ENSMUST00000227324 226 ntBASIC1.48□□□□□ -2.17
Chmp6P0C0A3 Gm24977-201ENSMUST00000083106 163 ntBASIC1.48□□□□□ -2.17
Chmp6P0C0A3 Gm23448-201ENSMUST00000083151 104 ntBASIC1.48□□□□□ -2.17
Chmp6P0C0A3 Mir340-201ENSMUST00000083483 98 ntBASIC1.48□□□□□ -2.17
Chmp6P0C0A3 Gm25859-201ENSMUST00000083710 91 ntBASIC1.48□□□□□ -2.17
Chmp6P0C0A3 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Chmp6P0C0A3 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.48□□□□□ -2.17
Chmp6P0C0A3 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Chmp6P0C0A3 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Chmp6P0C0A3 Gm24338-201ENSMUST00000104205 127 ntBASIC1.47□□□□□ -2.17
Chmp6P0C0A3 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.47□□□□□ -2.17
Chmp6P0C0A3 Gm24851-201ENSMUST00000158028 103 ntBASIC1.47□□□□□ -2.17
Chmp6P0C0A3 Gm25163-201ENSMUST00000158905 104 ntBASIC1.47□□□□□ -2.17
Chmp6P0C0A3 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Chmp6P0C0A3 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.47□□□□□ -2.17
Chmp6P0C0A3 Gm21737-201ENSMUST00000178112 664 ntBASIC1.47□□□□□ -2.17
Chmp6P0C0A3 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.47□□□□□ -2.17
Chmp6P0C0A3 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.47□□□□□ -2.17
Chmp6P0C0A3 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.47□□□□□ -2.17
Chmp6P0C0A3 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.47□□□□□ -2.17
Chmp6P0C0A3 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.47□□□□□ -2.17
Chmp6P0C0A3 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.47□□□□□ -2.17
Chmp6P0C0A3 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.47□□□□□ -2.17
Chmp6P0C0A3 Gm25936-201ENSMUST00000179952 114 ntBASIC1.47□□□□□ -2.17
Chmp6P0C0A3 Gm21729-201ENSMUST00000180058 664 ntBASIC1.47□□□□□ -2.17
Chmp6P0C0A3 Gm21853-201ENSMUST00000180071 664 ntBASIC1.47□□□□□ -2.17
Chmp6P0C0A3 Gm20901-201ENSMUST00000180177 664 ntBASIC1.47□□□□□ -2.17
Chmp6P0C0A3 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Chmp6P0C0A3 Mir7009-201ENSMUST00000184519 64 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms