Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Hoxd3P09027 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Hoxd3P09027 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Hoxd3P09027 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Hoxd3P09027 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Hoxd3P09027 Gm4736-201ENSMUST00000100870 380 ntBASIC3.2□□□□□ -1.9
Hoxd3P09027 Gm12252-201ENSMUST00000119517 219 ntBASIC3.2□□□□□ -1.9
Hoxd3P09027 Gm26253-201ENSMUST00000122493 103 ntBASIC3.2□□□□□ -1.9
Hoxd3P09027 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.2□□□□□ -1.9
Hoxd3P09027 Gm23253-201ENSMUST00000157441 104 ntBASIC3.2□□□□□ -1.9
Hoxd3P09027 Gm36964-201ENSMUST00000191876 198 ntBASIC3.2□□□□□ -1.9
Hoxd3P09027 Ighv1-1-201ENSMUST00000194912 291 ntBASIC3.2□□□□□ -1.9
Hoxd3P09027 Gm19620-201ENSMUST00000195972 434 ntBASIC3.2□□□□□ -1.9
Hoxd3P09027 AC125167.1-201ENSMUST00000198698 141 ntBASIC3.2□□□□□ -1.9
Hoxd3P09027 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.2□□□□□ -1.9
Hoxd3P09027 AC158597.1-201ENSMUST00000216234 150 ntBASIC3.2□□□□□ -1.9
Hoxd3P09027 Gm10042-201ENSMUST00000079884 78 ntBASIC3.2□□□□□ -1.9
Hoxd3P09027 Mir34b-201ENSMUST00000083558 84 ntBASIC3.2□□□□□ -1.9
Hoxd3P09027 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Hoxd3P09027 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Hoxd3P09027 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Hoxd3P09027 Gm43327-201ENSMUST00000199285 4055 ntBASIC3.19□□□□□ -1.9
Hoxd3P09027 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Hoxd3P09027 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Hoxd3P09027 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Hoxd3P09027 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC3.19□□□□□ -1.9
Hoxd3P09027 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Hoxd3P09027 Gm14567-201ENSMUST00000117155 174 ntBASIC3.19□□□□□ -1.9
Hoxd3P09027 n-R5s45-201ENSMUST00000122592 110 ntBASIC3.19□□□□□ -1.9
Hoxd3P09027 Gm24745-201ENSMUST00000157840 85 ntBASIC3.19□□□□□ -1.9
Hoxd3P09027 Gm22729-201ENSMUST00000158088 129 ntBASIC3.19□□□□□ -1.9
Hoxd3P09027 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.19□□□□□ -1.9
Hoxd3P09027 Gm23850-201ENSMUST00000083830 169 ntBASIC3.19□□□□□ -1.9
Hoxd3P09027 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Hoxd3P09027 Gm42718-201ENSMUST00000197319 2681 ntBASIC3.19□□□□□ -1.9
Hoxd3P09027 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Hoxd3P09027 Gm43658-201ENSMUST00000202348 4176 ntBASIC3.18□□□□□ -1.9
Hoxd3P09027 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.18□□□□□ -1.9
Hoxd3P09027 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Hoxd3P09027 Gm25456-201ENSMUST00000157952 109 ntBASIC3.18□□□□□ -1.9
Hoxd3P09027 Gm23112-201ENSMUST00000158606 125 ntBASIC3.18□□□□□ -1.9
Hoxd3P09027 Gm25999-201ENSMUST00000175398 133 ntBASIC3.18□□□□□ -1.9
Hoxd3P09027 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.18□□□□□ -1.9
Hoxd3P09027 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.18□□□□□ -1.9
Hoxd3P09027 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.18□□□□□ -1.9
Hoxd3P09027 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC3.18□□□□□ -1.9
Hoxd3P09027 Gm45006-201ENSMUST00000206078 690 ntBASIC3.18□□□□□ -1.9
Hoxd3P09027 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Hoxd3P09027 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.18□□□□□ -1.9
Hoxd3P09027 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.18□□□□□ -1.9
Hoxd3P09027 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Hoxd3P09027 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Hoxd3P09027 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Hoxd3P09027 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Hoxd3P09027 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Hoxd3P09027 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
Hoxd3P09027 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Hoxd3P09027 Gm13567-201ENSMUST00000118026 247 ntBASIC3.17□□□□□ -1.9
Hoxd3P09027 Gm13478-201ENSMUST00000118312 413 ntBASIC3.17□□□□□ -1.9
Hoxd3P09027 Gm11285-201ENSMUST00000118443 322 ntBASIC3.17□□□□□ -1.9
Hoxd3P09027 Gm24480-201ENSMUST00000157442 103 ntBASIC3.17□□□□□ -1.9
Hoxd3P09027 Gm24850-201ENSMUST00000158029 119 ntBASIC3.17□□□□□ -1.9
Hoxd3P09027 Gm24837-201ENSMUST00000158683 81 ntBASIC3.17□□□□□ -1.9
Hoxd3P09027 Gm25491-201ENSMUST00000158733 308 ntBASIC3.17□□□□□ -1.9
Hoxd3P09027 Gm27672-201ENSMUST00000183751 204 ntBASIC3.17□□□□□ -1.9
Hoxd3P09027 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC3.17□□□□□ -1.9
Hoxd3P09027 Mir6345-201ENSMUST00000184286 128 ntBASIC3.17□□□□□ -1.9
Hoxd3P09027 Gm6801-201ENSMUST00000190697 339 ntBASIC3.17□□□□□ -1.9
Hoxd3P09027 Gm44703-201ENSMUST00000205724 248 ntBASIC3.17□□□□□ -1.9
Hoxd3P09027 Gm25630-201ENSMUST00000084000 162 ntBASIC3.17□□□□□ -1.9
Hoxd3P09027 Gm38071-201ENSMUST00000195792 3378 ntBASIC3.17□□□□□ -1.9
Hoxd3P09027 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Hoxd3P09027 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Hoxd3P09027 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Hoxd3P09027 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Hoxd3P09027 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Hoxd3P09027 Gm45176-201ENSMUST00000207696 4096 ntBASIC3.17□□□□□ -1.9
Hoxd3P09027 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Hoxd3P09027 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Hoxd3P09027 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
Hoxd3P09027 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.16□□□□□ -1.9
Hoxd3P09027 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Hoxd3P09027 Gm24281-201ENSMUST00000104234 136 ntBASIC3.16□□□□□ -1.9
Hoxd3P09027 Gm22196-201ENSMUST00000116865 109 ntBASIC3.16□□□□□ -1.9
Hoxd3P09027 Gm14881-201ENSMUST00000120366 372 ntBASIC3.16□□□□□ -1.9
Hoxd3P09027 Gm11471-201ENSMUST00000121824 198 ntBASIC3.16□□□□□ -1.9
Hoxd3P09027 Gm25289-201ENSMUST00000122799 119 ntBASIC3.16□□□□□ -1.9
Hoxd3P09027 Gm22515-201ENSMUST00000158273 305 ntBASIC3.16□□□□□ -1.9
Hoxd3P09027 Mir3083-201ENSMUST00000175377 64 ntBASIC3.16□□□□□ -1.9
Hoxd3P09027 Gm23933-201ENSMUST00000178405 79 ntBASIC3.16□□□□□ -1.9
Hoxd3P09027 Gm26466-201ENSMUST00000179615 79 ntBASIC3.16□□□□□ -1.9
Hoxd3P09027 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Hoxd3P09027 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.16□□□□□ -1.9
Hoxd3P09027 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC3.16□□□□□ -1.9
Hoxd3P09027 AC152062.1-201ENSMUST00000218129 386 ntBASIC3.16□□□□□ -1.9
Hoxd3P09027 Gm6030-201ENSMUST00000078768 402 ntBASIC3.16□□□□□ -1.9
Hoxd3P09027 Gm22507-201ENSMUST00000082773 160 ntBASIC3.16□□□□□ -1.9
Hoxd3P09027 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.16□□□□□ -1.9
Hoxd3P09027 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
Hoxd3P09027 BC022960-201ENSMUST00000119987 1815 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 110.1 ms