Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Gm29167-201ENSMUST00000190024 377 ntBASIC2.63□□□□□ -1.99
ShdO88834 Gm45005-201ENSMUST00000206640 157 ntBASIC2.63□□□□□ -1.99
ShdO88834 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.63□□□□□ -1.99
ShdO88834 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.63□□□□□ -1.99
ShdO88834 AC160984.2-201ENSMUST00000224927 791 ntBASIC2.63□□□□□ -1.99
ShdO88834 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.63□□□□□ -1.99
ShdO88834 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
ShdO88834 Gm25589-201ENSMUST00000082502 166 ntBASIC2.63□□□□□ -1.99
ShdO88834 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC2.63□□□□□ -1.99
ShdO88834 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
ShdO88834 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
ShdO88834 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
ShdO88834 Gm23941-201ENSMUST00000101953 107 ntBASIC2.62□□□□□ -1.99
ShdO88834 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.62□□□□□ -1.99
ShdO88834 Gm24068-201ENSMUST00000104513 132 ntBASIC2.62□□□□□ -1.99
ShdO88834 Gm14894-201ENSMUST00000117170 270 ntBASIC2.62□□□□□ -1.99
ShdO88834 Gm13992-201ENSMUST00000120558 156 ntBASIC2.62□□□□□ -1.99
ShdO88834 Gm13581-201ENSMUST00000120675 278 ntBASIC2.62□□□□□ -1.99
ShdO88834 Gm13725-201ENSMUST00000122139 207 ntBASIC2.62□□□□□ -1.99
ShdO88834 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.62□□□□□ -1.99
ShdO88834 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC2.62□□□□□ -1.99
ShdO88834 Gm23470-201ENSMUST00000157129 120 ntBASIC2.62□□□□□ -1.99
ShdO88834 Gm22814-201ENSMUST00000157452 104 ntBASIC2.62□□□□□ -1.99
ShdO88834 Gm24436-201ENSMUST00000157889 302 ntBASIC2.62□□□□□ -1.99
ShdO88834 Gm21827-201ENSMUST00000178247 423 ntBASIC2.62□□□□□ -1.99
ShdO88834 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.62□□□□□ -1.99
ShdO88834 Gm37449-201ENSMUST00000193016 270 ntBASIC2.62□□□□□ -1.99
ShdO88834 Gm37763-201ENSMUST00000193445 120 ntBASIC2.62□□□□□ -1.99
ShdO88834 Gm18658-201ENSMUST00000195558 270 ntBASIC2.62□□□□□ -1.99
ShdO88834 Mir3535-201ENSMUST00000197651 147 ntBASIC2.62□□□□□ -1.99
ShdO88834 Gm43264-201ENSMUST00000202284 325 ntBASIC2.62□□□□□ -1.99
ShdO88834 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.62□□□□□ -1.99
ShdO88834 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.62□□□□□ -1.99
ShdO88834 mt-Td-201ENSMUST00000082404 70 ntBASIC2.62□□□□□ -1.99
ShdO88834 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC2.62□□□□□ -1.99
ShdO88834 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.62□□□□□ -1.99
ShdO88834 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
ShdO88834 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
ShdO88834 Gm15526-201ENSMUST00000112504 204 ntBASIC2.61□□□□□ -1.99
ShdO88834 Gm25111-201ENSMUST00000116686 147 ntBASIC2.61□□□□□ -1.99
ShdO88834 Gm24480-201ENSMUST00000157442 103 ntBASIC2.61□□□□□ -1.99
ShdO88834 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC2.61□□□□□ -1.99
ShdO88834 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.61□□□□□ -1.99
ShdO88834 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.61□□□□□ -1.99
ShdO88834 AC154552.1-201ENSMUST00000222969 202 ntBASIC2.61□□□□□ -1.99
ShdO88834 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
ShdO88834 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
ShdO88834 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
ShdO88834 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.6□□□□□ -1.99
ShdO88834 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
ShdO88834 Gm24670-201ENSMUST00000104154 132 ntBASIC2.6□□□□□ -1.99
ShdO88834 Gm26341-201ENSMUST00000104561 134 ntBASIC2.6□□□□□ -1.99
ShdO88834 Gm9850-201ENSMUST00000117916 227 ntBASIC2.6□□□□□ -1.99
ShdO88834 Gm11572-201ENSMUST00000119164 120 ntBASIC2.6□□□□□ -1.99
ShdO88834 Gm25808-201ENSMUST00000122784 284 ntBASIC2.6□□□□□ -1.99
ShdO88834 Gm25805-201ENSMUST00000122788 108 ntBASIC2.6□□□□□ -1.99
ShdO88834 Gm2830-201ENSMUST00000140330 385 ntBASIC2.6□□□□□ -1.99
ShdO88834 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
ShdO88834 Gm25888-201ENSMUST00000157778 302 ntBASIC2.6□□□□□ -1.99
ShdO88834 Gm25933-201ENSMUST00000178943 108 ntBASIC2.6□□□□□ -1.99
ShdO88834 Gm25450-201ENSMUST00000179144 107 ntBASIC2.6□□□□□ -1.99
ShdO88834 Mir8103-201ENSMUST00000183945 107 ntBASIC2.6□□□□□ -1.99
ShdO88834 Gm27332-201ENSMUST00000184893 112 ntBASIC2.6□□□□□ -1.99
ShdO88834 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.6□□□□□ -1.99
ShdO88834 Gm38019-201ENSMUST00000195133 380 ntBASIC2.6□□□□□ -1.99
ShdO88834 Gm42578-201ENSMUST00000199960 194 ntBASIC2.6□□□□□ -1.99
ShdO88834 Gm44182-201ENSMUST00000204052 115 ntBASIC2.6□□□□□ -1.99
ShdO88834 Gm44903-201ENSMUST00000206840 130 ntBASIC2.6□□□□□ -1.99
ShdO88834 AC170600.1-201ENSMUST00000228763 277 ntBASIC2.6□□□□□ -1.99
ShdO88834 Gm25078-201ENSMUST00000082530 107 ntBASIC2.6□□□□□ -1.99
ShdO88834 Gm23055-201ENSMUST00000082805 94 ntBASIC2.6□□□□□ -1.99
ShdO88834 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
ShdO88834 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
ShdO88834 Gm12926-201ENSMUST00000121158 409 ntBASIC2.59□□□□□ -1.99
ShdO88834 Gm7209-201ENSMUST00000122339 333 ntBASIC2.59□□□□□ -1.99
ShdO88834 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.59□□□□□ -1.99
ShdO88834 Gm24818-201ENSMUST00000175093 161 ntBASIC2.59□□□□□ -1.99
ShdO88834 Gm27527-201ENSMUST00000183903 99 ntBASIC2.59□□□□□ -1.99
ShdO88834 Gm28627-201ENSMUST00000186141 453 ntBASIC2.59□□□□□ -1.99
ShdO88834 Gm28849-201ENSMUST00000188127 174 ntBASIC2.59□□□□□ -1.99
ShdO88834 Gm28330-201ENSMUST00000190353 171 ntBASIC2.59□□□□□ -1.99
ShdO88834 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.59□□□□□ -1.99
ShdO88834 Gm42594-201ENSMUST00000199511 246 ntBASIC2.59□□□□□ -1.99
ShdO88834 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
ShdO88834 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
ShdO88834 Gm4746-201ENSMUST00000120395 2406 ntBASIC2.59□□□□□ -2
ShdO88834 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.58□□□□□ -2
ShdO88834 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC2.58□□□□□ -2
ShdO88834 Gm23013-201ENSMUST00000104146 106 ntBASIC2.58□□□□□ -2
ShdO88834 Gm13967-201ENSMUST00000120404 380 ntBASIC2.58□□□□□ -2
ShdO88834 Gm16355-201ENSMUST00000128606 231 ntBASIC2.58□□□□□ -2
ShdO88834 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC2.58□□□□□ -2
ShdO88834 Gm23600-201ENSMUST00000157260 71 ntBASIC2.58□□□□□ -2
ShdO88834 Gm25059-201ENSMUST00000157367 117 ntBASIC2.58□□□□□ -2
ShdO88834 Gm22483-201ENSMUST00000157986 274 ntBASIC2.58□□□□□ -2
ShdO88834 Gm24922-201ENSMUST00000158511 102 ntBASIC2.58□□□□□ -2
ShdO88834 Gm25711-201ENSMUST00000158633 128 ntBASIC2.58□□□□□ -2
ShdO88834 Gm23474-201ENSMUST00000158884 75 ntBASIC2.58□□□□□ -2
ShdO88834 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
ShdO88834 Gm29005-201ENSMUST00000186773 320 ntBASIC2.58□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 142.6 ms