Protein–RNA interactions for Protein: O70258

Sgce, Epsilon-sarcoglycan, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgceO70258 Gm24456-201ENSMUST00000083198 107 ntBASIC1.26□□□□□ -2.21
SgceO70258 Gm24458-201ENSMUST00000083204 107 ntBASIC1.26□□□□□ -2.21
SgceO70258 Gm24018-201ENSMUST00000083232 107 ntBASIC1.26□□□□□ -2.21
SgceO70258 Gm25790-201ENSMUST00000083293 107 ntBASIC1.26□□□□□ -2.21
SgceO70258 Gm22295-201ENSMUST00000083311 107 ntBASIC1.26□□□□□ -2.21
SgceO70258 Gm25127-201ENSMUST00000083336 107 ntBASIC1.26□□□□□ -2.21
SgceO70258 Gm25583-201ENSMUST00000083413 107 ntBASIC1.26□□□□□ -2.21
SgceO70258 Gm25577-201ENSMUST00000083414 107 ntBASIC1.26□□□□□ -2.21
SgceO70258 Gm24414-201ENSMUST00000083434 107 ntBASIC1.26□□□□□ -2.21
SgceO70258 Gm24861-201ENSMUST00000083459 107 ntBASIC1.26□□□□□ -2.21
SgceO70258 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.26□□□□□ -2.21
SgceO70258 Gm24803-201ENSMUST00000083693 107 ntBASIC1.26□□□□□ -2.21
SgceO70258 Gm23103-201ENSMUST00000083725 107 ntBASIC1.26□□□□□ -2.21
SgceO70258 Gm22580-201ENSMUST00000083727 107 ntBASIC1.26□□□□□ -2.21
SgceO70258 Gm24260-201ENSMUST00000083741 107 ntBASIC1.26□□□□□ -2.21
SgceO70258 Gm23732-201ENSMUST00000083751 107 ntBASIC1.26□□□□□ -2.21
SgceO70258 Gm22682-201ENSMUST00000083854 107 ntBASIC1.26□□□□□ -2.21
SgceO70258 Gm25869-201ENSMUST00000083855 107 ntBASIC1.26□□□□□ -2.21
SgceO70258 Gm24693-201ENSMUST00000083885 107 ntBASIC1.26□□□□□ -2.21
SgceO70258 Gm26317-201ENSMUST00000083894 107 ntBASIC1.26□□□□□ -2.21
SgceO70258 Gm22352-201ENSMUST00000083917 107 ntBASIC1.26□□□□□ -2.21
SgceO70258 Gm24448-201ENSMUST00000083979 107 ntBASIC1.26□□□□□ -2.21
SgceO70258 Gm22798-201ENSMUST00000083992 107 ntBASIC1.26□□□□□ -2.21
SgceO70258 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SgceO70258 Gm26427-201ENSMUST00000093648 107 ntBASIC1.26□□□□□ -2.21
SgceO70258 Gm22886-201ENSMUST00000093714 107 ntBASIC1.26□□□□□ -2.21
SgceO70258 Gm22170-201ENSMUST00000097247 107 ntBASIC1.26□□□□□ -2.21
SgceO70258 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
SgceO70258 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
SgceO70258 Gm14882-201ENSMUST00000117216 218 ntBASIC1.25□□□□□ -2.21
SgceO70258 Gm11835-201ENSMUST00000120635 663 ntBASIC1.25□□□□□ -2.21
SgceO70258 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC1.25□□□□□ -2.21
SgceO70258 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC1.25□□□□□ -2.21
SgceO70258 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC1.25□□□□□ -2.21
SgceO70258 Gm26149-201ENSMUST00000157432 108 ntBASIC1.25□□□□□ -2.21
SgceO70258 Gm24191-201ENSMUST00000157977 122 ntBASIC1.25□□□□□ -2.21
SgceO70258 Gm22768-201ENSMUST00000158366 153 ntBASIC1.25□□□□□ -2.21
SgceO70258 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.25□□□□□ -2.21
SgceO70258 Gm26335-201ENSMUST00000178449 107 ntBASIC1.25□□□□□ -2.21
SgceO70258 Gm27313-201ENSMUST00000183500 142 ntBASIC1.25□□□□□ -2.21
SgceO70258 Gm44483-201ENSMUST00000197203 97 ntBASIC1.25□□□□□ -2.21
SgceO70258 Gm43427-201ENSMUST00000198188 331 ntBASIC1.25□□□□□ -2.21
SgceO70258 Mir1291-201ENSMUST00000199842 117 ntBASIC1.25□□□□□ -2.21
SgceO70258 Gm44726-201ENSMUST00000203427 217 ntBASIC1.25□□□□□ -2.21
SgceO70258 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.25□□□□□ -2.21
SgceO70258 Gm18696-201ENSMUST00000220103 274 ntBASIC1.25□□□□□ -2.21
SgceO70258 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.25□□□□□ -2.21
SgceO70258 Gm23462-201ENSMUST00000083264 104 ntBASIC1.25□□□□□ -2.21
SgceO70258 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.25□□□□□ -2.21
SgceO70258 Gm37642-201ENSMUST00000193166 1735 ntBASIC1.24□□□□□ -2.21
SgceO70258 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
SgceO70258 Gm13457-201ENSMUST00000117885 267 ntBASIC1.24□□□□□ -2.21
SgceO70258 Gm12433-201ENSMUST00000119659 255 ntBASIC1.24□□□□□ -2.21
SgceO70258 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC1.24□□□□□ -2.21
SgceO70258 Gm24481-201ENSMUST00000157210 102 ntBASIC1.24□□□□□ -2.21
SgceO70258 Gm26401-201ENSMUST00000158502 76 ntBASIC1.24□□□□□ -2.21
SgceO70258 Gm26501-201ENSMUST00000178307 107 ntBASIC1.24□□□□□ -2.21
SgceO70258 Gm26652-202ENSMUST00000181672 475 ntBASIC1.24□□□□□ -2.21
SgceO70258 Gm27711-201ENSMUST00000183802 118 ntBASIC1.24□□□□□ -2.21
SgceO70258 Gm28740-201ENSMUST00000186142 215 ntBASIC1.24□□□□□ -2.21
SgceO70258 Gm28506-201ENSMUST00000189937 150 ntBASIC1.24□□□□□ -2.21
SgceO70258 Gm21064-202ENSMUST00000190583 278 ntBASIC1.24□□□□□ -2.21
SgceO70258 Gm37162-201ENSMUST00000191708 551 ntBASIC1.24□□□□□ -2.21
SgceO70258 Gm42570-201ENSMUST00000195937 292 ntBASIC1.24□□□□□ -2.21
SgceO70258 Gm42960-201ENSMUST00000202160 241 ntBASIC1.24□□□□□ -2.21
SgceO70258 Gm44564-201ENSMUST00000207985 180 ntBASIC1.24□□□□□ -2.21
SgceO70258 Gm8125-201ENSMUST00000216602 738 ntBASIC1.24□□□□□ -2.21
SgceO70258 AC108945.1-201ENSMUST00000226477 94 ntBASIC1.24□□□□□ -2.21
SgceO70258 Ear14-201ENSMUST00000049559 468 ntBASIC1.24□□□□□ -2.21
SgceO70258 Gm22062-201ENSMUST00000082563 107 ntBASIC1.24□□□□□ -2.21
SgceO70258 Gm26175-201ENSMUST00000083794 131 ntBASIC1.24□□□□□ -2.21
SgceO70258 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.24□□□□□ -2.21
SgceO70258 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.24□□□□□ -2.21
SgceO70258 AC163660.3-201ENSMUST00000224253 1563 ntBASIC1.24□□□□□ -2.21
SgceO70258 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.24□□□□□ -2.21
SgceO70258 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.23□□□□□ -2.21
SgceO70258 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
SgceO70258 Gm25759-201ENSMUST00000103988 129 ntBASIC1.23□□□□□ -2.21
SgceO70258 Gm25269-201ENSMUST00000122601 104 ntBASIC1.23□□□□□ -2.21
SgceO70258 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.23□□□□□ -2.21
SgceO70258 Gm22555-201ENSMUST00000157801 62 ntBASIC1.23□□□□□ -2.21
SgceO70258 Gm22663-201ENSMUST00000158721 102 ntBASIC1.23□□□□□ -2.21
SgceO70258 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
SgceO70258 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC1.23□□□□□ -2.21
SgceO70258 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
SgceO70258 Mir7225-201ENSMUST00000184178 54 ntBASIC1.23□□□□□ -2.21
SgceO70258 Gm29397-201ENSMUST00000185205 333 ntBASIC1.23□□□□□ -2.21
SgceO70258 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC1.23□□□□□ -2.21
SgceO70258 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.23□□□□□ -2.21
SgceO70258 AL935138.1-201ENSMUST00000215309 196 ntBASIC1.23□□□□□ -2.21
SgceO70258 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.23□□□□□ -2.21
SgceO70258 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.23□□□□□ -2.21
SgceO70258 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC1.22□□□□□ -2.21
SgceO70258 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
SgceO70258 Gm15365-201ENSMUST00000122392 300 ntBASIC1.22□□□□□ -2.21
SgceO70258 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.22□□□□□ -2.21
SgceO70258 Gm22199-201ENSMUST00000122660 126 ntBASIC1.22□□□□□ -2.21
SgceO70258 Gm23670-201ENSMUST00000157469 119 ntBASIC1.22□□□□□ -2.21
SgceO70258 Gm23122-201ENSMUST00000157645 103 ntBASIC1.22□□□□□ -2.21
SgceO70258 Gm24409-201ENSMUST00000157881 152 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 193.8 ms