Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.44□□□□□ -2.02
Smarce1O54941 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.44□□□□□ -2.02
Smarce1O54941 Gm5396-201ENSMUST00000121222 532 ntBASIC2.44□□□□□ -2.02
Smarce1O54941 Gm12785-201ENSMUST00000122052 172 ntBASIC2.44□□□□□ -2.02
Smarce1O54941 Gm23589-201ENSMUST00000157660 105 ntBASIC2.44□□□□□ -2.02
Smarce1O54941 Gm25284-201ENSMUST00000180345 141 ntBASIC2.44□□□□□ -2.02
Smarce1O54941 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.44□□□□□ -2.02
Smarce1O54941 Gm44468-201ENSMUST00000199516 105 ntBASIC2.44□□□□□ -2.02
Smarce1O54941 Gm43587-201ENSMUST00000199590 204 ntBASIC2.44□□□□□ -2.02
Smarce1O54941 Gm44063-201ENSMUST00000203307 376 ntBASIC2.44□□□□□ -2.02
Smarce1O54941 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC2.44□□□□□ -2.02
Smarce1O54941 Gm2829-201ENSMUST00000213121 499 ntBASIC2.44□□□□□ -2.02
Smarce1O54941 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.44□□□□□ -2.02
Smarce1O54941 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.44□□□□□ -2.02
Smarce1O54941 Gm22685-201ENSMUST00000082848 106 ntBASIC2.44□□□□□ -2.02
Smarce1O54941 Gm24044-201ENSMUST00000083107 156 ntBASIC2.44□□□□□ -2.02
Smarce1O54941 Gm23462-201ENSMUST00000083264 104 ntBASIC2.44□□□□□ -2.02
Smarce1O54941 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Smarce1O54941 Gm14215-201ENSMUST00000120578 221 ntBASIC2.43□□□□□ -2.02
Smarce1O54941 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.43□□□□□ -2.02
Smarce1O54941 Gm22159-201ENSMUST00000158412 130 ntBASIC2.43□□□□□ -2.02
Smarce1O54941 Gm25956-201ENSMUST00000175115 217 ntBASIC2.43□□□□□ -2.02
Smarce1O54941 Gm22800-201ENSMUST00000175627 94 ntBASIC2.43□□□□□ -2.02
Smarce1O54941 Gm27640-201ENSMUST00000184580 147 ntBASIC2.43□□□□□ -2.02
Smarce1O54941 Gm28627-201ENSMUST00000186141 453 ntBASIC2.43□□□□□ -2.02
Smarce1O54941 Gm37162-201ENSMUST00000191708 551 ntBASIC2.43□□□□□ -2.02
Smarce1O54941 Ighv1-28-201ENSMUST00000192987 351 ntBASIC2.43□□□□□ -2.02
Smarce1O54941 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC2.43□□□□□ -2.02
Smarce1O54941 Gm44966-201ENSMUST00000208096 157 ntBASIC2.43□□□□□ -2.02
Smarce1O54941 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Smarce1O54941 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Smarce1O54941 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Smarce1O54941 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.43□□□□□ -2.02
Smarce1O54941 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.43□□□□□ -2.02
Smarce1O54941 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Smarce1O54941 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Smarce1O54941 Gm22678-201ENSMUST00000116974 101 ntBASIC2.42□□□□□ -2.02
Smarce1O54941 Gm13581-201ENSMUST00000120675 278 ntBASIC2.42□□□□□ -2.02
Smarce1O54941 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.42□□□□□ -2.02
Smarce1O54941 Gm25488-201ENSMUST00000158728 118 ntBASIC2.42□□□□□ -2.02
Smarce1O54941 Gm22263-201ENSMUST00000180060 104 ntBASIC2.42□□□□□ -2.02
Smarce1O54941 Gm28848-201ENSMUST00000189984 168 ntBASIC2.42□□□□□ -2.02
Smarce1O54941 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.42□□□□□ -2.02
Smarce1O54941 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.42□□□□□ -2.02
Smarce1O54941 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Smarce1O54941 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Smarce1O54941 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Smarce1O54941 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Smarce1O54941 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Smarce1O54941 Gm13432-201ENSMUST00000118861 241 ntBASIC2.41□□□□□ -2.02
Smarce1O54941 Gm23381-201ENSMUST00000157676 94 ntBASIC2.41□□□□□ -2.02
Smarce1O54941 Gm22727-201ENSMUST00000158090 116 ntBASIC2.41□□□□□ -2.02
Smarce1O54941 Gm22434-201ENSMUST00000158549 122 ntBASIC2.41□□□□□ -2.02
Smarce1O54941 Gm24308-201ENSMUST00000177773 114 ntBASIC2.41□□□□□ -2.02
Smarce1O54941 Mir6993-201ENSMUST00000184912 65 ntBASIC2.41□□□□□ -2.02
Smarce1O54941 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.41□□□□□ -2.02
Smarce1O54941 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC2.41□□□□□ -2.02
Smarce1O54941 Gm44010-201ENSMUST00000204432 331 ntBASIC2.41□□□□□ -2.02
Smarce1O54941 AC122905.2-201ENSMUST00000220325 269 ntBASIC2.41□□□□□ -2.02
Smarce1O54941 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Smarce1O54941 AC130829.3-201ENSMUST00000222735 154 ntBASIC2.41□□□□□ -2.02
Smarce1O54941 Gm23412-201ENSMUST00000083017 107 ntBASIC2.41□□□□□ -2.02
Smarce1O54941 Gm23246-201ENSMUST00000083371 67 ntBASIC2.41□□□□□ -2.02
Smarce1O54941 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.41□□□□□ -2.02
Smarce1O54941 Gm24098-201ENSMUST00000102075 109 ntBASIC2.4□□□□□ -2.03
Smarce1O54941 Gm25381-201ENSMUST00000102078 109 ntBASIC2.4□□□□□ -2.03
Smarce1O54941 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Smarce1O54941 Gm24274-201ENSMUST00000116787 124 ntBASIC2.4□□□□□ -2.03
Smarce1O54941 Gm11935-201ENSMUST00000118608 399 ntBASIC2.4□□□□□ -2.03
Smarce1O54941 Gm14748-201ENSMUST00000119819 411 ntBASIC2.4□□□□□ -2.03
Smarce1O54941 Gm25863-201ENSMUST00000158249 329 ntBASIC2.4□□□□□ -2.03
Smarce1O54941 Gm23262-201ENSMUST00000158323 168 ntBASIC2.4□□□□□ -2.03
Smarce1O54941 Gm27991-201ENSMUST00000184804 137 ntBASIC2.4□□□□□ -2.03
Smarce1O54941 Gm28257-201ENSMUST00000185244 463 ntBASIC2.4□□□□□ -2.03
Smarce1O54941 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC2.4□□□□□ -2.03
Smarce1O54941 Gm19777-201ENSMUST00000191940 358 ntBASIC2.4□□□□□ -2.03
Smarce1O54941 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.4□□□□□ -2.03
Smarce1O54941 Gm44938-201ENSMUST00000208614 427 ntBASIC2.4□□□□□ -2.03
Smarce1O54941 Gm18991-201ENSMUST00000209225 746 ntBASIC2.4□□□□□ -2.03
Smarce1O54941 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.4□□□□□ -2.03
Smarce1O54941 AC132437.1-201ENSMUST00000218308 320 ntBASIC2.4□□□□□ -2.03
Smarce1O54941 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.4□□□□□ -2.03
Smarce1O54941 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Smarce1O54941 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.4□□□□□ -2.03
Smarce1O54941 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
Smarce1O54941 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC2.39□□□□□ -2.03
Smarce1O54941 Gm24049-201ENSMUST00000102409 100 ntBASIC2.39□□□□□ -2.03
Smarce1O54941 Gm26249-201ENSMUST00000116708 118 ntBASIC2.39□□□□□ -2.03
Smarce1O54941 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.39□□□□□ -2.03
Smarce1O54941 Gm15365-201ENSMUST00000122392 300 ntBASIC2.39□□□□□ -2.03
Smarce1O54941 Gm7592-201ENSMUST00000160674 627 ntBASIC2.39□□□□□ -2.03
Smarce1O54941 Gm23813-201ENSMUST00000175153 77 ntBASIC2.39□□□□□ -2.03
Smarce1O54941 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC2.39□□□□□ -2.03
Smarce1O54941 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Smarce1O54941 Gm28016-201ENSMUST00000184594 196 ntBASIC2.39□□□□□ -2.03
Smarce1O54941 Gm28995-201ENSMUST00000186625 261 ntBASIC2.39□□□□□ -2.03
Smarce1O54941 Gm29005-201ENSMUST00000186773 320 ntBASIC2.39□□□□□ -2.03
Smarce1O54941 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.39□□□□□ -2.03
Smarce1O54941 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC2.39□□□□□ -2.03
Smarce1O54941 Trav15d-3-201ENSMUST00000198604 167 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 107.3 ms