Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC0.57□□□□□ -2.32
Hmgb3O54879 Gm24076-201ENSMUST00000158179 94 ntBASIC0.57□□□□□ -2.32
Hmgb3O54879 Gm24942-201ENSMUST00000158328 114 ntBASIC0.57□□□□□ -2.32
Hmgb3O54879 Gm7925-201ENSMUST00000166690 401 ntBASIC0.57□□□□□ -2.32
Hmgb3O54879 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
Hmgb3O54879 Gm37399-201ENSMUST00000195224 416 ntBASIC0.57□□□□□ -2.32
Hmgb3O54879 Gm43739-201ENSMUST00000198294 307 ntBASIC0.57□□□□□ -2.32
Hmgb3O54879 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
Hmgb3O54879 Gm7495-201ENSMUST00000215099 426 ntBASIC0.57□□□□□ -2.32
Hmgb3O54879 Gm9795-201ENSMUST00000062156 693 ntBASIC0.57□□□□□ -2.32
Hmgb3O54879 Mir465-201ENSMUST00000093563 74 ntBASIC0.57□□□□□ -2.32
Hmgb3O54879 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.57□□□□□ -2.32
Hmgb3O54879 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC0.57□□□□□ -2.32
Hmgb3O54879 Gm12106-201ENSMUST00000116006 1200 ntBASIC0.56□□□□□ -2.32
Hmgb3O54879 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.56□□□□□ -2.32
Hmgb3O54879 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.56□□□□□ -2.32
Hmgb3O54879 Gm37946-201ENSMUST00000192064 347 ntBASIC0.56□□□□□ -2.32
Hmgb3O54879 Gm43114-201ENSMUST00000198298 343 ntBASIC0.56□□□□□ -2.32
Hmgb3O54879 Gm5010-201ENSMUST00000213131 260 ntBASIC0.56□□□□□ -2.32
Hmgb3O54879 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC0.56□□□□□ -2.32
Hmgb3O54879 CT010506.2-201ENSMUST00000225618 183 ntBASIC0.56□□□□□ -2.32
Hmgb3O54879 Gm25851-201ENSMUST00000082794 107 ntBASIC0.56□□□□□ -2.32
Hmgb3O54879 Gm12080-201ENSMUST00000119821 1883 ntBASIC0.56□□□□□ -2.32
Hmgb3O54879 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.55□□□□□ -2.32
Hmgb3O54879 Gm26249-201ENSMUST00000116708 118 ntBASIC0.55□□□□□ -2.32
Hmgb3O54879 Gm12806-201ENSMUST00000119384 268 ntBASIC0.55□□□□□ -2.32
Hmgb3O54879 Gm11358-201ENSMUST00000122310 373 ntBASIC0.55□□□□□ -2.32
Hmgb3O54879 Gm25663-201ENSMUST00000157698 135 ntBASIC0.55□□□□□ -2.32
Hmgb3O54879 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.55□□□□□ -2.32
Hmgb3O54879 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC0.55□□□□□ -2.32
Hmgb3O54879 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC0.55□□□□□ -2.32
Hmgb3O54879 Gm27420-201ENSMUST00000183823 79 ntBASIC0.55□□□□□ -2.32
Hmgb3O54879 Gm29661-201ENSMUST00000186781 315 ntBASIC0.55□□□□□ -2.32
Hmgb3O54879 Gm29308-201ENSMUST00000188863 315 ntBASIC0.55□□□□□ -2.32
Hmgb3O54879 Gm34073-201ENSMUST00000195736 212 ntBASIC0.55□□□□□ -2.32
Hmgb3O54879 Gm42834-201ENSMUST00000196845 256 ntBASIC0.55□□□□□ -2.32
Hmgb3O54879 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
Hmgb3O54879 AC162931.1-201ENSMUST00000214184 267 ntBASIC0.55□□□□□ -2.32
Hmgb3O54879 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC0.55□□□□□ -2.32
Hmgb3O54879 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC0.55□□□□□ -2.32
Hmgb3O54879 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
Hmgb3O54879 Gm23503-201ENSMUST00000083903 107 ntBASIC0.55□□□□□ -2.32
Hmgb3O54879 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
Hmgb3O54879 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
Hmgb3O54879 Gm22759-201ENSMUST00000102276 96 ntBASIC0.54□□□□□ -2.32
Hmgb3O54879 Gm24579-201ENSMUST00000103964 144 ntBASIC0.54□□□□□ -2.32
Hmgb3O54879 n-R5s202-201ENSMUST00000104517 114 ntBASIC0.54□□□□□ -2.32
Hmgb3O54879 Gm7916-201ENSMUST00000120325 456 ntBASIC0.54□□□□□ -2.32
Hmgb3O54879 Gm2962-201ENSMUST00000159266 336 ntBASIC0.54□□□□□ -2.32
Hmgb3O54879 Gm17054-201ENSMUST00000169811 259 ntBASIC0.54□□□□□ -2.32
Hmgb3O54879 Gm23289-201ENSMUST00000175615 108 ntBASIC0.54□□□□□ -2.32
Hmgb3O54879 Gm25451-201ENSMUST00000177832 121 ntBASIC0.54□□□□□ -2.32
Hmgb3O54879 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.54□□□□□ -2.32
Hmgb3O54879 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC0.54□□□□□ -2.32
Hmgb3O54879 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC0.54□□□□□ -2.32
Hmgb3O54879 Mir6962-201ENSMUST00000199512 63 ntBASIC0.54□□□□□ -2.32
Hmgb3O54879 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC0.54□□□□□ -2.32
Hmgb3O54879 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.54□□□□□ -2.32
Hmgb3O54879 Gm18703-201ENSMUST00000215318 333 ntBASIC0.54□□□□□ -2.32
Hmgb3O54879 Gm18242-201ENSMUST00000218455 542 ntBASIC0.54□□□□□ -2.32
Hmgb3O54879 AC123709.1-201ENSMUST00000224848 345 ntBASIC0.54□□□□□ -2.32
Hmgb3O54879 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
Hmgb3O54879 Gm26338-201ENSMUST00000102372 110 ntBASIC0.53□□□□□ -2.32
Hmgb3O54879 Gm22817-201ENSMUST00000157448 356 ntBASIC0.53□□□□□ -2.32
Hmgb3O54879 Gm22597-201ENSMUST00000157602 80 ntBASIC0.53□□□□□ -2.32
Hmgb3O54879 Gm10177-202ENSMUST00000161698 207 ntBASIC0.53□□□□□ -2.32
Hmgb3O54879 Mir5104-201ENSMUST00000175319 94 ntBASIC0.53□□□□□ -2.32
Hmgb3O54879 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC0.53□□□□□ -2.32
Hmgb3O54879 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
Hmgb3O54879 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC0.53□□□□□ -2.32
Hmgb3O54879 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC0.53□□□□□ -2.32
Hmgb3O54879 Gm44320-201ENSMUST00000199276 86 ntBASIC0.53□□□□□ -2.32
Hmgb3O54879 Gm45375-201ENSMUST00000210338 280 ntBASIC0.53□□□□□ -2.32
Hmgb3O54879 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC0.53□□□□□ -2.32
Hmgb3O54879 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC0.53□□□□□ -2.32
Hmgb3O54879 AC164304.1-201ENSMUST00000226920 272 ntBASIC0.53□□□□□ -2.32
Hmgb3O54879 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC0.53□□□□□ -2.32
Hmgb3O54879 Mir695-201ENSMUST00000102261 109 ntBASIC0.52□□□□□ -2.33
Hmgb3O54879 Gm15061-201ENSMUST00000121076 1046 ntBASIC0.52□□□□□ -2.33
Hmgb3O54879 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
Hmgb3O54879 Gm24747-201ENSMUST00000157835 87 ntBASIC0.52□□□□□ -2.33
Hmgb3O54879 Gm23777-201ENSMUST00000158994 259 ntBASIC0.52□□□□□ -2.33
Hmgb3O54879 Gm22403-201ENSMUST00000174919 84 ntBASIC0.52□□□□□ -2.33
Hmgb3O54879 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC0.52□□□□□ -2.33
Hmgb3O54879 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
Hmgb3O54879 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC0.52□□□□□ -2.33
Hmgb3O54879 Gm44326-201ENSMUST00000198226 101 ntBASIC0.52□□□□□ -2.33
Hmgb3O54879 Gm42164-201ENSMUST00000198881 379 ntBASIC0.52□□□□□ -2.33
Hmgb3O54879 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC0.52□□□□□ -2.33
Hmgb3O54879 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC0.52□□□□□ -2.33
Hmgb3O54879 Gm46997-201ENSMUST00000222108 217 ntBASIC0.52□□□□□ -2.33
Hmgb3O54879 AC173482.4-201ENSMUST00000225096 348 ntBASIC0.52□□□□□ -2.33
Hmgb3O54879 AC163646.2-201ENSMUST00000227962 141 ntBASIC0.52□□□□□ -2.33
Hmgb3O54879 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
Hmgb3O54879 Gm25578-201ENSMUST00000083406 104 ntBASIC0.52□□□□□ -2.33
Hmgb3O54879 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
Hmgb3O54879 Gm12102-201ENSMUST00000118251 604 ntBASIC0.51□□□□□ -2.33
Hmgb3O54879 Gm14989-201ENSMUST00000120497 207 ntBASIC0.51□□□□□ -2.33
Hmgb3O54879 Gm22477-201ENSMUST00000122569 316 ntBASIC0.51□□□□□ -2.33
Hmgb3O54879 Gm23230-201ENSMUST00000157298 133 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 104.8 ms