Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm25059-201ENSMUST00000157367 117 ntBASIC0.71□□□□□ -2.3
Sdc4O35988 Gm25914-201ENSMUST00000157618 153 ntBASIC0.71□□□□□ -2.3
Sdc4O35988 Gm23854-201ENSMUST00000158378 108 ntBASIC0.71□□□□□ -2.3
Sdc4O35988 Gm24366-201ENSMUST00000175383 86 ntBASIC0.71□□□□□ -2.3
Sdc4O35988 Gm27271-201ENSMUST00000183509 170 ntBASIC0.71□□□□□ -2.3
Sdc4O35988 Gm28011-201ENSMUST00000184097 175 ntBASIC0.71□□□□□ -2.3
Sdc4O35988 Gm37923-201ENSMUST00000191624 161 ntBASIC0.71□□□□□ -2.3
Sdc4O35988 Gm36984-201ENSMUST00000192770 235 ntBASIC0.71□□□□□ -2.3
Sdc4O35988 Gm37757-201ENSMUST00000193072 210 ntBASIC0.71□□□□□ -2.3
Sdc4O35988 Trbv24-201ENSMUST00000194614 347 ntBASIC0.71□□□□□ -2.3
Sdc4O35988 Gm35736-201ENSMUST00000203681 313 ntBASIC0.71□□□□□ -2.3
Sdc4O35988 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC0.71□□□□□ -2.3
Sdc4O35988 AC126267.1-201ENSMUST00000214282 284 ntBASIC0.71□□□□□ -2.3
Sdc4O35988 AC069561.2-201ENSMUST00000217596 420 ntBASIC0.71□□□□□ -2.3
Sdc4O35988 Gm10092-201ENSMUST00000077110 180 ntBASIC0.71□□□□□ -2.3
Sdc4O35988 Gm15266-201ENSMUST00000119635 255 ntBASIC0.7□□□□□ -2.3
Sdc4O35988 Gm14937-201ENSMUST00000119709 208 ntBASIC0.7□□□□□ -2.3
Sdc4O35988 n-R5s80-201ENSMUST00000122596 111 ntBASIC0.7□□□□□ -2.3
Sdc4O35988 Gm3221-201ENSMUST00000164869 440 ntBASIC0.7□□□□□ -2.3
Sdc4O35988 Gm17164-201ENSMUST00000169013 506 ntBASIC0.7□□□□□ -2.3
Sdc4O35988 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.7□□□□□ -2.3
Sdc4O35988 Gm20438-201ENSMUST00000174441 329 ntBASIC0.7□□□□□ -2.3
Sdc4O35988 Gm20613-201ENSMUST00000175828 345 ntBASIC0.7□□□□□ -2.3
Sdc4O35988 Gm24897-201ENSMUST00000179033 107 ntBASIC0.7□□□□□ -2.3
Sdc4O35988 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC0.7□□□□□ -2.3
Sdc4O35988 Gm29037-201ENSMUST00000189092 313 ntBASIC0.7□□□□□ -2.3
Sdc4O35988 Gm43529-201ENSMUST00000199178 412 ntBASIC0.7□□□□□ -2.3
Sdc4O35988 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC0.7□□□□□ -2.3
Sdc4O35988 Gm44446-201ENSMUST00000204864 255 ntBASIC0.7□□□□□ -2.3
Sdc4O35988 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC0.7□□□□□ -2.3
Sdc4O35988 AC162931.1-201ENSMUST00000214184 267 ntBASIC0.7□□□□□ -2.3
Sdc4O35988 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
Sdc4O35988 Gm25589-201ENSMUST00000082502 166 ntBASIC0.7□□□□□ -2.3
Sdc4O35988 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
Sdc4O35988 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
Sdc4O35988 Gm43706-201ENSMUST00000198767 2652 ntBASIC0.7□□□□□ -2.3
Sdc4O35988 Mir544-201ENSMUST00000103813 78 ntBASIC0.69□□□□□ -2.3
Sdc4O35988 Gm16412-201ENSMUST00000121602 273 ntBASIC0.69□□□□□ -2.3
Sdc4O35988 Gm23656-201ENSMUST00000122626 112 ntBASIC0.69□□□□□ -2.3
Sdc4O35988 Gm23435-201ENSMUST00000157183 156 ntBASIC0.69□□□□□ -2.3
Sdc4O35988 Gm23008-201ENSMUST00000158946 80 ntBASIC0.69□□□□□ -2.3
Sdc4O35988 Gm27660-201ENSMUST00000184028 208 ntBASIC0.69□□□□□ -2.3
Sdc4O35988 Gm38113-201ENSMUST00000193704 201 ntBASIC0.69□□□□□ -2.3
Sdc4O35988 Gm37693-201ENSMUST00000194562 234 ntBASIC0.69□□□□□ -2.3
Sdc4O35988 Gm44548-201ENSMUST00000208929 192 ntBASIC0.69□□□□□ -2.3
Sdc4O35988 AC153957.1-201ENSMUST00000215235 229 ntBASIC0.69□□□□□ -2.3
Sdc4O35988 Gm23453-201ENSMUST00000083326 106 ntBASIC0.69□□□□□ -2.3
Sdc4O35988 Snord35a-201ENSMUST00000083884 90 ntBASIC0.69□□□□□ -2.3
Sdc4O35988 Gm26150-201ENSMUST00000157426 151 ntBASIC0.68□□□□□ -2.3
Sdc4O35988 Gm26271-201ENSMUST00000158349 104 ntBASIC0.68□□□□□ -2.3
Sdc4O35988 Gm16038-201ENSMUST00000159317 193 ntBASIC0.68□□□□□ -2.3
Sdc4O35988 Gm3111-201ENSMUST00000167426 490 ntBASIC0.68□□□□□ -2.3
Sdc4O35988 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.68□□□□□ -2.3
Sdc4O35988 Gm20386-201ENSMUST00000174010 132 ntBASIC0.68□□□□□ -2.3
Sdc4O35988 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC0.68□□□□□ -2.3
Sdc4O35988 Gm25451-201ENSMUST00000177832 121 ntBASIC0.68□□□□□ -2.3
Sdc4O35988 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC0.68□□□□□ -2.3
Sdc4O35988 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC0.68□□□□□ -2.3
Sdc4O35988 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC0.68□□□□□ -2.3
Sdc4O35988 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC0.68□□□□□ -2.3
Sdc4O35988 AL450317.1-201ENSMUST00000213941 291 ntBASIC0.68□□□□□ -2.3
Sdc4O35988 AC159203.2-201ENSMUST00000221326 193 ntBASIC0.68□□□□□ -2.3
Sdc4O35988 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
Sdc4O35988 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
Sdc4O35988 Gm6369-201ENSMUST00000069626 412 ntBASIC0.68□□□□□ -2.3
Sdc4O35988 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC0.68□□□□□ -2.3
Sdc4O35988 Gm24045-201ENSMUST00000083113 98 ntBASIC0.68□□□□□ -2.3
Sdc4O35988 Mir10a-201ENSMUST00000083585 110 ntBASIC0.68□□□□□ -2.3
Sdc4O35988 Mir200b-201ENSMUST00000083615 70 ntBASIC0.68□□□□□ -2.3
Sdc4O35988 Gm18795-202ENSMUST00000223373 2920 ntBASIC0.68□□□□□ -2.3
Sdc4O35988 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
Sdc4O35988 Gm26249-201ENSMUST00000116708 118 ntBASIC0.67□□□□□ -2.3
Sdc4O35988 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC0.67□□□□□ -2.3
Sdc4O35988 Gm24598-201ENSMUST00000122510 74 ntBASIC0.67□□□□□ -2.3
Sdc4O35988 Gm22027-201ENSMUST00000122737 127 ntBASIC0.67□□□□□ -2.3
Sdc4O35988 Gm26405-201ENSMUST00000158495 100 ntBASIC0.67□□□□□ -2.3
Sdc4O35988 Gm17054-201ENSMUST00000169811 259 ntBASIC0.67□□□□□ -2.3
Sdc4O35988 Gm20543-201ENSMUST00000174200 726 ntBASIC0.67□□□□□ -2.3
Sdc4O35988 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC0.67□□□□□ -2.3
Sdc4O35988 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC0.67□□□□□ -2.3
Sdc4O35988 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC0.67□□□□□ -2.3
Sdc4O35988 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC0.67□□□□□ -2.3
Sdc4O35988 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC0.67□□□□□ -2.3
Sdc4O35988 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC0.67□□□□□ -2.3
Sdc4O35988 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC0.67□□□□□ -2.3
Sdc4O35988 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC0.67□□□□□ -2.3
Sdc4O35988 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
Sdc4O35988 Gm29613-201ENSMUST00000185846 313 ntBASIC0.67□□□□□ -2.3
Sdc4O35988 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC0.67□□□□□ -2.3
Sdc4O35988 Gm29544-201ENSMUST00000188860 313 ntBASIC0.67□□□□□ -2.3
Sdc4O35988 Gm28808-201ENSMUST00000190978 313 ntBASIC0.67□□□□□ -2.3
Sdc4O35988 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
Sdc4O35988 Gm43245-201ENSMUST00000197603 468 ntBASIC0.67□□□□□ -2.3
Sdc4O35988 Gm44254-201ENSMUST00000204184 322 ntBASIC0.67□□□□□ -2.3
Sdc4O35988 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.67□□□□□ -2.3
Sdc4O35988 Gm2628-201ENSMUST00000218019 426 ntBASIC0.67□□□□□ -2.3
Sdc4O35988 Gm26437-201ENSMUST00000082595 105 ntBASIC0.67□□□□□ -2.3
Sdc4O35988 Gm24536-201ENSMUST00000083144 107 ntBASIC0.67□□□□□ -2.3
Sdc4O35988 Gm24494-201ENSMUST00000083804 81 ntBASIC0.67□□□□□ -2.3
Sdc4O35988 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms