Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 Mir370-201ENSMUST00000083499 79 ntBASIC3.41□□□□□ -1.86
Ccdc9bA3KGF9 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.41□□□□□ -1.86
Ccdc9bA3KGF9 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC3.41□□□□□ -1.86
Ccdc9bA3KGF9 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Ccdc9bA3KGF9 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
Ccdc9bA3KGF9 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
Ccdc9bA3KGF9 Gm22270-201ENSMUST00000104034 132 ntBASIC3.4□□□□□ -1.87
Ccdc9bA3KGF9 Gm8244-201ENSMUST00000121254 264 ntBASIC3.4□□□□□ -1.87
Ccdc9bA3KGF9 Gm13852-201ENSMUST00000122350 242 ntBASIC3.4□□□□□ -1.87
Ccdc9bA3KGF9 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC3.4□□□□□ -1.87
Ccdc9bA3KGF9 Gm25059-201ENSMUST00000157367 117 ntBASIC3.4□□□□□ -1.87
Ccdc9bA3KGF9 Gm24008-201ENSMUST00000157733 138 ntBASIC3.4□□□□□ -1.87
Ccdc9bA3KGF9 Gm24811-201ENSMUST00000175313 100 ntBASIC3.4□□□□□ -1.87
Ccdc9bA3KGF9 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.4□□□□□ -1.87
Ccdc9bA3KGF9 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Ccdc9bA3KGF9 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.4□□□□□ -1.87
Ccdc9bA3KGF9 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.4□□□□□ -1.87
Ccdc9bA3KGF9 Gm43676-201ENSMUST00000197532 540 ntBASIC3.4□□□□□ -1.87
Ccdc9bA3KGF9 Gm44338-201ENSMUST00000198614 110 ntBASIC3.4□□□□□ -1.87
Ccdc9bA3KGF9 Gm44099-201ENSMUST00000203299 112 ntBASIC3.4□□□□□ -1.87
Ccdc9bA3KGF9 Gm44600-201ENSMUST00000208540 111 ntBASIC3.4□□□□□ -1.87
Ccdc9bA3KGF9 Gm45162-201ENSMUST00000209013 618 ntBASIC3.4□□□□□ -1.87
Ccdc9bA3KGF9 CT030687.1-201ENSMUST00000221854 162 ntBASIC3.4□□□□□ -1.87
Ccdc9bA3KGF9 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.4□□□□□ -1.87
Ccdc9bA3KGF9 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
Ccdc9bA3KGF9 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
Ccdc9bA3KGF9 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Ccdc9bA3KGF9 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Ccdc9bA3KGF9 Gm11566-201ENSMUST00000118550 203 ntBASIC3.39□□□□□ -1.87
Ccdc9bA3KGF9 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC3.39□□□□□ -1.87
Ccdc9bA3KGF9 Gm26405-201ENSMUST00000158495 100 ntBASIC3.39□□□□□ -1.87
Ccdc9bA3KGF9 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.39□□□□□ -1.87
Ccdc9bA3KGF9 Gm43155-201ENSMUST00000202661 494 ntBASIC3.39□□□□□ -1.87
Ccdc9bA3KGF9 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.39□□□□□ -1.87
Ccdc9bA3KGF9 Gm24148-201ENSMUST00000082762 80 ntBASIC3.39□□□□□ -1.87
Ccdc9bA3KGF9 Gm25200-201ENSMUST00000083094 130 ntBASIC3.39□□□□□ -1.87
Ccdc9bA3KGF9 Gm25481-201ENSMUST00000083221 158 ntBASIC3.39□□□□□ -1.87
Ccdc9bA3KGF9 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
Ccdc9bA3KGF9 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Ccdc9bA3KGF9 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Ccdc9bA3KGF9 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Ccdc9bA3KGF9 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.38□□□□□ -1.87
Ccdc9bA3KGF9 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.38□□□□□ -1.87
Ccdc9bA3KGF9 Mir673-201ENSMUST00000102361 91 ntBASIC3.38□□□□□ -1.87
Ccdc9bA3KGF9 Gm13761-201ENSMUST00000117238 807 ntBASIC3.38□□□□□ -1.87
Ccdc9bA3KGF9 Gm16327-201ENSMUST00000137146 228 ntBASIC3.38□□□□□ -1.87
Ccdc9bA3KGF9 Mir1951-201ENSMUST00000157981 89 ntBASIC3.38□□□□□ -1.87
Ccdc9bA3KGF9 Gm23337-201ENSMUST00000158959 118 ntBASIC3.38□□□□□ -1.87
Ccdc9bA3KGF9 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC3.38□□□□□ -1.87
Ccdc9bA3KGF9 Gm27828-201ENSMUST00000184108 119 ntBASIC3.38□□□□□ -1.87
Ccdc9bA3KGF9 Mir6914-201ENSMUST00000184999 69 ntBASIC3.38□□□□□ -1.87
Ccdc9bA3KGF9 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC3.38□□□□□ -1.87
Ccdc9bA3KGF9 Gm42988-201ENSMUST00000198116 225 ntBASIC3.38□□□□□ -1.87
Ccdc9bA3KGF9 Gm43901-201ENSMUST00000203247 453 ntBASIC3.38□□□□□ -1.87
Ccdc9bA3KGF9 Gm45080-201ENSMUST00000206648 283 ntBASIC3.38□□□□□ -1.87
Ccdc9bA3KGF9 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.38□□□□□ -1.87
Ccdc9bA3KGF9 Gm23297-201ENSMUST00000083184 127 ntBASIC3.38□□□□□ -1.87
Ccdc9bA3KGF9 Gm24929-201ENSMUST00000083403 139 ntBASIC3.38□□□□□ -1.87
Ccdc9bA3KGF9 Gm10242-201ENSMUST00000090064 330 ntBASIC3.38□□□□□ -1.87
Ccdc9bA3KGF9 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Ccdc9bA3KGF9 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
Ccdc9bA3KGF9 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC3.38□□□□□ -1.87
Ccdc9bA3KGF9 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Ccdc9bA3KGF9 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Ccdc9bA3KGF9 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.37□□□□□ -1.87
Ccdc9bA3KGF9 Gm38255-201ENSMUST00000194910 2996 ntBASIC3.37□□□□□ -1.87
Ccdc9bA3KGF9 Gm6952-201ENSMUST00000118629 159 ntBASIC3.37□□□□□ -1.87
Ccdc9bA3KGF9 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC3.37□□□□□ -1.87
Ccdc9bA3KGF9 Gm23183-201ENSMUST00000122595 323 ntBASIC3.37□□□□□ -1.87
Ccdc9bA3KGF9 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.37□□□□□ -1.87
Ccdc9bA3KGF9 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.37□□□□□ -1.87
Ccdc9bA3KGF9 Gm23230-201ENSMUST00000157298 133 ntBASIC3.37□□□□□ -1.87
Ccdc9bA3KGF9 Gm22349-201ENSMUST00000157864 107 ntBASIC3.37□□□□□ -1.87
Ccdc9bA3KGF9 Gm22967-201ENSMUST00000157956 239 ntBASIC3.37□□□□□ -1.87
Ccdc9bA3KGF9 Gm26022-201ENSMUST00000158663 108 ntBASIC3.37□□□□□ -1.87
Ccdc9bA3KGF9 Gm22800-201ENSMUST00000175627 94 ntBASIC3.37□□□□□ -1.87
Ccdc9bA3KGF9 Gm29308-201ENSMUST00000188863 315 ntBASIC3.37□□□□□ -1.87
Ccdc9bA3KGF9 Gm28537-201ENSMUST00000189026 315 ntBASIC3.37□□□□□ -1.87
Ccdc9bA3KGF9 Gm29631-201ENSMUST00000191065 315 ntBASIC3.37□□□□□ -1.87
Ccdc9bA3KGF9 Gm38311-201ENSMUST00000192945 165 ntBASIC3.37□□□□□ -1.87
Ccdc9bA3KGF9 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.37□□□□□ -1.87
Ccdc9bA3KGF9 Gm44824-201ENSMUST00000207021 229 ntBASIC3.37□□□□□ -1.87
Ccdc9bA3KGF9 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.37□□□□□ -1.87
Ccdc9bA3KGF9 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.37□□□□□ -1.87
Ccdc9bA3KGF9 AC122194.1-201ENSMUST00000220549 293 ntBASIC3.37□□□□□ -1.87
Ccdc9bA3KGF9 Gm11351-202ENSMUST00000225724 478 ntBASIC3.37□□□□□ -1.87
Ccdc9bA3KGF9 Gm6030-201ENSMUST00000078768 402 ntBASIC3.37□□□□□ -1.87
Ccdc9bA3KGF9 Gm22304-201ENSMUST00000082688 129 ntBASIC3.37□□□□□ -1.87
Ccdc9bA3KGF9 Mir30e-201ENSMUST00000083475 92 ntBASIC3.37□□□□□ -1.87
Ccdc9bA3KGF9 Gm10212-201ENSMUST00000087884 324 ntBASIC3.37□□□□□ -1.87
Ccdc9bA3KGF9 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC3.37□□□□□ -1.87
Ccdc9bA3KGF9 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.37□□□□□ -1.87
Ccdc9bA3KGF9 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.37□□□□□ -1.87
Ccdc9bA3KGF9 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
Ccdc9bA3KGF9 Gm38071-201ENSMUST00000195792 3378 ntBASIC3.37□□□□□ -1.87
Ccdc9bA3KGF9 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Ccdc9bA3KGF9 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Ccdc9bA3KGF9 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Ccdc9bA3KGF9 Gm6025-201ENSMUST00000121517 201 ntBASIC3.36□□□□□ -1.87
Ccdc9bA3KGF9 Gm26476-201ENSMUST00000122618 313 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms