Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Scn3aA2ASI5 Gm38388-201ENSMUST00000195569 1430 ntBASIC1.35□□□□□ -2.19
Scn3aA2ASI5 Gm44726-201ENSMUST00000203427 217 ntBASIC1.35□□□□□ -2.19
Scn3aA2ASI5 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Scn3aA2ASI5 AC116465.1-201ENSMUST00000220324 235 ntBASIC1.35□□□□□ -2.19
Scn3aA2ASI5 AC133079.1-201ENSMUST00000220943 1881 ntBASIC1.35□□□□□ -2.19
Scn3aA2ASI5 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.35□□□□□ -2.19
Scn3aA2ASI5 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.35□□□□□ -2.19
Scn3aA2ASI5 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
Scn3aA2ASI5 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC1.35□□□□□ -2.19
Scn3aA2ASI5 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Scn3aA2ASI5 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.35□□□□□ -2.19
Scn3aA2ASI5 Snord98-201ENSMUST00000116819 65 ntBASIC1.34□□□□□ -2.19
Scn3aA2ASI5 Gm18356-201ENSMUST00000185677 623 ntBASIC1.34□□□□□ -2.19
Scn3aA2ASI5 Gm10193-201ENSMUST00000188288 231 ntBASIC1.34□□□□□ -2.19
Scn3aA2ASI5 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.19
Scn3aA2ASI5 Gm17990-201ENSMUST00000211728 553 ntBASIC1.34□□□□□ -2.19
Scn3aA2ASI5 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC1.34□□□□□ -2.19
Scn3aA2ASI5 Gm46993-201ENSMUST00000220708 259 ntBASIC1.34□□□□□ -2.19
Scn3aA2ASI5 AC114916.1-201ENSMUST00000228465 494 ntBASIC1.34□□□□□ -2.19
Scn3aA2ASI5 Gm25853-201ENSMUST00000082793 132 ntBASIC1.34□□□□□ -2.19
Scn3aA2ASI5 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
Scn3aA2ASI5 Gm12393-201ENSMUST00000117084 848 ntBASIC1.34□□□□□ -2.2
Scn3aA2ASI5 Gm12053-201ENSMUST00000119022 252 ntBASIC1.34□□□□□ -2.2
Scn3aA2ASI5 Gm22555-201ENSMUST00000157801 62 ntBASIC1.34□□□□□ -2.2
Scn3aA2ASI5 Gm22731-201ENSMUST00000158086 94 ntBASIC1.34□□□□□ -2.2
Scn3aA2ASI5 Gm26401-201ENSMUST00000158502 76 ntBASIC1.34□□□□□ -2.2
Scn3aA2ASI5 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.34□□□□□ -2.2
Scn3aA2ASI5 Gm25069-201ENSMUST00000175238 86 ntBASIC1.34□□□□□ -2.2
Scn3aA2ASI5 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
Scn3aA2ASI5 Gm28506-201ENSMUST00000189937 150 ntBASIC1.34□□□□□ -2.2
Scn3aA2ASI5 Gm42834-201ENSMUST00000196845 256 ntBASIC1.34□□□□□ -2.2
Scn3aA2ASI5 Gm43406-201ENSMUST00000200356 334 ntBASIC1.34□□□□□ -2.2
Scn3aA2ASI5 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.34□□□□□ -2.2
Scn3aA2ASI5 AC108945.1-201ENSMUST00000226477 94 ntBASIC1.34□□□□□ -2.2
Scn3aA2ASI5 Mir196b-201ENSMUST00000083509 85 ntBASIC1.34□□□□□ -2.2
Scn3aA2ASI5 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Scn3aA2ASI5 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Scn3aA2ASI5 Mir701-201ENSMUST00000102208 109 ntBASIC1.33□□□□□ -2.2
Scn3aA2ASI5 Gm22771-201ENSMUST00000104449 91 ntBASIC1.33□□□□□ -2.2
Scn3aA2ASI5 Gm24895-201ENSMUST00000122742 74 ntBASIC1.33□□□□□ -2.2
Scn3aA2ASI5 Gm26278-201ENSMUST00000157098 132 ntBASIC1.33□□□□□ -2.2
Scn3aA2ASI5 Gm24409-201ENSMUST00000157881 152 ntBASIC1.33□□□□□ -2.2
Scn3aA2ASI5 Mir5101-201ENSMUST00000175181 83 ntBASIC1.33□□□□□ -2.2
Scn3aA2ASI5 Gm19932-201ENSMUST00000177033 313 ntBASIC1.33□□□□□ -2.2
Scn3aA2ASI5 Gm44910-201ENSMUST00000208451 396 ntBASIC1.33□□□□□ -2.2
Scn3aA2ASI5 Gm45365-201ENSMUST00000209489 256 ntBASIC1.33□□□□□ -2.2
Scn3aA2ASI5 AL935138.1-201ENSMUST00000215309 196 ntBASIC1.33□□□□□ -2.2
Scn3aA2ASI5 Gm18188-201ENSMUST00000219386 478 ntBASIC1.33□□□□□ -2.2
Scn3aA2ASI5 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Scn3aA2ASI5 Gm15443-201ENSMUST00000118947 820 ntBASIC1.32□□□□□ -2.2
Scn3aA2ASI5 Gm11991-201ENSMUST00000119652 1074 ntBASIC1.32□□□□□ -2.2
Scn3aA2ASI5 Gm13153-201ENSMUST00000120969 637 ntBASIC1.32□□□□□ -2.2
Scn3aA2ASI5 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Scn3aA2ASI5 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Scn3aA2ASI5 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Scn3aA2ASI5 Gm23379-201ENSMUST00000180026 107 ntBASIC1.32□□□□□ -2.2
Scn3aA2ASI5 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
Scn3aA2ASI5 Gm18775-201ENSMUST00000190763 586 ntBASIC1.32□□□□□ -2.2
Scn3aA2ASI5 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
Scn3aA2ASI5 Gm33866-201ENSMUST00000196911 289 ntBASIC1.32□□□□□ -2.2
Scn3aA2ASI5 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Scn3aA2ASI5 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.32□□□□□ -2.2
Scn3aA2ASI5 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC1.32□□□□□ -2.2
Scn3aA2ASI5 Gm26335-201ENSMUST00000178449 107 ntBASIC1.32□□□□□ -2.2
Scn3aA2ASI5 Gm25933-201ENSMUST00000178943 108 ntBASIC1.32□□□□□ -2.2
Scn3aA2ASI5 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.32□□□□□ -2.2
Scn3aA2ASI5 Gm27722-201ENSMUST00000183908 76 ntBASIC1.32□□□□□ -2.2
Scn3aA2ASI5 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
Scn3aA2ASI5 Gm38261-201ENSMUST00000192608 316 ntBASIC1.32□□□□□ -2.2
Scn3aA2ASI5 Gm42960-201ENSMUST00000202160 241 ntBASIC1.32□□□□□ -2.2
Scn3aA2ASI5 Gm29848-201ENSMUST00000203107 295 ntBASIC1.32□□□□□ -2.2
Scn3aA2ASI5 Gm44564-201ENSMUST00000207985 180 ntBASIC1.32□□□□□ -2.2
Scn3aA2ASI5 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.32□□□□□ -2.2
Scn3aA2ASI5 Gm23454-201ENSMUST00000083332 133 ntBASIC1.32□□□□□ -2.2
Scn3aA2ASI5 Gm23100-201ENSMUST00000083455 141 ntBASIC1.32□□□□□ -2.2
Scn3aA2ASI5 Gm23042-201ENSMUST00000083866 101 ntBASIC1.32□□□□□ -2.2
Scn3aA2ASI5 AC163660.3-201ENSMUST00000224253 1563 ntBASIC1.31□□□□□ -2.2
Scn3aA2ASI5 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.31□□□□□ -2.2
Scn3aA2ASI5 Gm11512-201ENSMUST00000119669 663 ntBASIC1.31□□□□□ -2.2
Scn3aA2ASI5 Gm15529-201ENSMUST00000121833 994 ntBASIC1.31□□□□□ -2.2
Scn3aA2ASI5 Gm23184-201ENSMUST00000122594 131 ntBASIC1.31□□□□□ -2.2
Scn3aA2ASI5 Gm27396-201ENSMUST00000157708 58 ntBASIC1.31□□□□□ -2.2
Scn3aA2ASI5 Gm25335-201ENSMUST00000158043 103 ntBASIC1.31□□□□□ -2.2
Scn3aA2ASI5 Gm27957-201ENSMUST00000184054 127 ntBASIC1.31□□□□□ -2.2
Scn3aA2ASI5 Gm28151-201ENSMUST00000189404 951 ntBASIC1.31□□□□□ -2.2
Scn3aA2ASI5 Gm20102-201ENSMUST00000222445 220 ntBASIC1.31□□□□□ -2.2
Scn3aA2ASI5 AC135292.1-201ENSMUST00000227665 204 ntBASIC1.31□□□□□ -2.2
Scn3aA2ASI5 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.31□□□□□ -2.2
Scn3aA2ASI5 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.31□□□□□ -2.2
Scn3aA2ASI5 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Scn3aA2ASI5 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC1.3□□□□□ -2.2
Scn3aA2ASI5 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC1.3□□□□□ -2.2
Scn3aA2ASI5 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC1.3□□□□□ -2.2
Scn3aA2ASI5 Gm24632-201ENSMUST00000122770 323 ntBASIC1.3□□□□□ -2.2
Scn3aA2ASI5 Mir1954-201ENSMUST00000175595 86 ntBASIC1.3□□□□□ -2.2
Scn3aA2ASI5 Gm27236-201ENSMUST00000184147 442 ntBASIC1.3□□□□□ -2.2
Scn3aA2ASI5 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.3□□□□□ -2.2
Scn3aA2ASI5 Gm43680-201ENSMUST00000199466 340 ntBASIC1.3□□□□□ -2.2
Scn3aA2ASI5 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 251.8 ms