Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.55□□□□□ -2.16
CtcflA2APF3 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.55□□□□□ -2.16
CtcflA2APF3 Gm25625-201ENSMUST00000157221 96 ntBASIC1.55□□□□□ -2.16
CtcflA2APF3 Gm23381-201ENSMUST00000157676 94 ntBASIC1.55□□□□□ -2.16
CtcflA2APF3 Gm24388-201ENSMUST00000177872 107 ntBASIC1.55□□□□□ -2.16
CtcflA2APF3 Mir6399-201ENSMUST00000184050 84 ntBASIC1.55□□□□□ -2.16
CtcflA2APF3 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CtcflA2APF3 AC130821.1-201ENSMUST00000221997 293 ntBASIC1.55□□□□□ -2.16
CtcflA2APF3 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.55□□□□□ -2.16
CtcflA2APF3 AC117202.2-201ENSMUST00000226491 1101 ntBASIC1.55□□□□□ -2.16
CtcflA2APF3 Gm26457-201ENSMUST00000082678 78 ntBASIC1.55□□□□□ -2.16
CtcflA2APF3 Gm25813-201ENSMUST00000082748 191 ntBASIC1.55□□□□□ -2.16
CtcflA2APF3 Gm24406-201ENSMUST00000083026 128 ntBASIC1.55□□□□□ -2.16
CtcflA2APF3 Gm23453-201ENSMUST00000083326 106 ntBASIC1.55□□□□□ -2.16
CtcflA2APF3 Gm25579-201ENSMUST00000083407 106 ntBASIC1.55□□□□□ -2.16
CtcflA2APF3 Mir701-201ENSMUST00000102208 109 ntBASIC1.54□□□□□ -2.16
CtcflA2APF3 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
CtcflA2APF3 Snord98-201ENSMUST00000116819 65 ntBASIC1.54□□□□□ -2.16
CtcflA2APF3 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CtcflA2APF3 Gm24858-201ENSMUST00000158058 323 ntBASIC1.54□□□□□ -2.16
CtcflA2APF3 Gm25012-201ENSMUST00000158396 164 ntBASIC1.54□□□□□ -2.16
CtcflA2APF3 Gm16162-201ENSMUST00000162296 297 ntBASIC1.54□□□□□ -2.16
CtcflA2APF3 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CtcflA2APF3 Gm26194-201ENSMUST00000175036 71 ntBASIC1.54□□□□□ -2.16
CtcflA2APF3 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC1.54□□□□□ -2.16
CtcflA2APF3 Mir6351-201ENSMUST00000183826 99 ntBASIC1.54□□□□□ -2.16
CtcflA2APF3 Mir7678-201ENSMUST00000185076 71 ntBASIC1.54□□□□□ -2.16
CtcflA2APF3 Gm27588-201ENSMUST00000185096 263 ntBASIC1.54□□□□□ -2.16
CtcflA2APF3 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CtcflA2APF3 Gm37054-201ENSMUST00000193481 543 ntBASIC1.54□□□□□ -2.16
CtcflA2APF3 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CtcflA2APF3 Gm25820-202ENSMUST00000197479 128 ntBASIC1.54□□□□□ -2.16
CtcflA2APF3 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.54□□□□□ -2.16
CtcflA2APF3 AC126554.1-201ENSMUST00000222161 271 ntBASIC1.54□□□□□ -2.16
CtcflA2APF3 AC104832.1-201ENSMUST00000222938 550 ntBASIC1.54□□□□□ -2.16
CtcflA2APF3 Gm23627-201ENSMUST00000082459 107 ntBASIC1.54□□□□□ -2.16
CtcflA2APF3 Gm22502-201ENSMUST00000082488 107 ntBASIC1.54□□□□□ -2.16
CtcflA2APF3 Gm22977-201ENSMUST00000082615 107 ntBASIC1.54□□□□□ -2.16
CtcflA2APF3 Gm24149-201ENSMUST00000082757 107 ntBASIC1.54□□□□□ -2.16
CtcflA2APF3 Gm24805-201ENSMUST00000082931 104 ntBASIC1.54□□□□□ -2.16
CtcflA2APF3 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
CtcflA2APF3 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CtcflA2APF3 Gm38388-201ENSMUST00000195569 1430 ntBASIC1.54□□□□□ -2.16
CtcflA2APF3 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.54□□□□□ -2.16
CtcflA2APF3 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CtcflA2APF3 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CtcflA2APF3 Gm25392-201ENSMUST00000157335 297 ntBASIC1.53□□□□□ -2.16
CtcflA2APF3 Snord13-201ENSMUST00000157627 104 ntBASIC1.53□□□□□ -2.16
CtcflA2APF3 Gm22803-201ENSMUST00000158049 283 ntBASIC1.53□□□□□ -2.16
CtcflA2APF3 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.53□□□□□ -2.16
CtcflA2APF3 Gm21815-201ENSMUST00000178213 664 ntBASIC1.53□□□□□ -2.16
CtcflA2APF3 Gm23191-201ENSMUST00000179147 107 ntBASIC1.53□□□□□ -2.16
CtcflA2APF3 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.53□□□□□ -2.16
CtcflA2APF3 Gm28414-201ENSMUST00000190111 294 ntBASIC1.53□□□□□ -2.16
CtcflA2APF3 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.53□□□□□ -2.16
CtcflA2APF3 Gm36953-201ENSMUST00000195295 268 ntBASIC1.53□□□□□ -2.16
CtcflA2APF3 Gm42570-201ENSMUST00000195937 292 ntBASIC1.53□□□□□ -2.16
CtcflA2APF3 Gm45815-201ENSMUST00000220241 146 ntBASIC1.53□□□□□ -2.16
CtcflA2APF3 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.53□□□□□ -2.16
CtcflA2APF3 AC164297.3-201ENSMUST00000224238 94 ntBASIC1.53□□□□□ -2.16
CtcflA2APF3 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CtcflA2APF3 Gm23462-201ENSMUST00000083264 104 ntBASIC1.53□□□□□ -2.16
CtcflA2APF3 Gm25651-201ENSMUST00000083782 119 ntBASIC1.53□□□□□ -2.16
CtcflA2APF3 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.53□□□□□ -2.16
CtcflA2APF3 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
CtcflA2APF3 Gm22678-201ENSMUST00000116974 101 ntBASIC1.52□□□□□ -2.17
CtcflA2APF3 Gm15010-201ENSMUST00000117153 407 ntBASIC1.52□□□□□ -2.17
CtcflA2APF3 Gm13885-201ENSMUST00000117569 187 ntBASIC1.52□□□□□ -2.17
CtcflA2APF3 Gm13432-201ENSMUST00000118861 241 ntBASIC1.52□□□□□ -2.17
CtcflA2APF3 Gm6444-201ENSMUST00000119611 458 ntBASIC1.52□□□□□ -2.17
CtcflA2APF3 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC1.52□□□□□ -2.17
CtcflA2APF3 Gm25269-201ENSMUST00000122601 104 ntBASIC1.52□□□□□ -2.17
CtcflA2APF3 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC1.52□□□□□ -2.17
CtcflA2APF3 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC1.52□□□□□ -2.17
CtcflA2APF3 Gm23589-201ENSMUST00000157660 105 ntBASIC1.52□□□□□ -2.17
CtcflA2APF3 Gm22800-201ENSMUST00000175627 94 ntBASIC1.52□□□□□ -2.17
CtcflA2APF3 Gm22308-201ENSMUST00000177609 107 ntBASIC1.52□□□□□ -2.17
CtcflA2APF3 Gm20874-201ENSMUST00000178356 663 ntBASIC1.52□□□□□ -2.17
CtcflA2APF3 Gm37128-201ENSMUST00000192599 232 ntBASIC1.52□□□□□ -2.17
CtcflA2APF3 Gm42807-201ENSMUST00000200141 329 ntBASIC1.52□□□□□ -2.17
CtcflA2APF3 Gm22062-201ENSMUST00000082563 107 ntBASIC1.52□□□□□ -2.17
CtcflA2APF3 Gm22997-201ENSMUST00000082845 107 ntBASIC1.52□□□□□ -2.17
CtcflA2APF3 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
CtcflA2APF3 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CtcflA2APF3 Gm14624-201ENSMUST00000117746 192 ntBASIC1.51□□□□□ -2.17
CtcflA2APF3 Gm5396-201ENSMUST00000121222 532 ntBASIC1.51□□□□□ -2.17
CtcflA2APF3 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CtcflA2APF3 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC1.51□□□□□ -2.17
CtcflA2APF3 Gm24262-201ENSMUST00000157431 144 ntBASIC1.51□□□□□ -2.17
CtcflA2APF3 Gm25888-201ENSMUST00000157778 302 ntBASIC1.51□□□□□ -2.17
CtcflA2APF3 Gm24053-201ENSMUST00000158620 105 ntBASIC1.51□□□□□ -2.17
CtcflA2APF3 Gm23181-201ENSMUST00000158685 110 ntBASIC1.51□□□□□ -2.17
CtcflA2APF3 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CtcflA2APF3 Gm3027-201ENSMUST00000167579 451 ntBASIC1.51□□□□□ -2.17
CtcflA2APF3 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC1.51□□□□□ -2.17
CtcflA2APF3 Gm25956-201ENSMUST00000175115 217 ntBASIC1.51□□□□□ -2.17
CtcflA2APF3 Gm24810-201ENSMUST00000175317 70 ntBASIC1.51□□□□□ -2.17
CtcflA2APF3 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC1.51□□□□□ -2.17
CtcflA2APF3 Mir6406-201ENSMUST00000183592 120 ntBASIC1.51□□□□□ -2.17
CtcflA2APF3 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC1.51□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 134.5 ms