Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Gm44446-201ENSMUST00000204864 255 ntBASIC1.2□□□□□ -2.22
IsxA1A546 Snora3-201ENSMUST00000083082 132 ntBASIC1.2□□□□□ -2.22
IsxA1A546 Snora34-201ENSMUST00000083402 138 ntBASIC1.2□□□□□ -2.22
IsxA1A546 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC1.2□□□□□ -2.22
IsxA1A546 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.2□□□□□ -2.22
IsxA1A546 AC124426.1-203ENSMUST00000221814 1362 ntBASIC1.2□□□□□ -2.22
IsxA1A546 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
IsxA1A546 Gm26049-201ENSMUST00000157313 108 ntBASIC1.19□□□□□ -2.22
IsxA1A546 Gm25423-201ENSMUST00000157609 107 ntBASIC1.19□□□□□ -2.22
IsxA1A546 Gm23122-201ENSMUST00000157645 103 ntBASIC1.19□□□□□ -2.22
IsxA1A546 Gm22654-201ENSMUST00000157874 105 ntBASIC1.19□□□□□ -2.22
IsxA1A546 Gm26363-201ENSMUST00000158866 83 ntBASIC1.19□□□□□ -2.22
IsxA1A546 Gm23967-201ENSMUST00000175062 78 ntBASIC1.19□□□□□ -2.22
IsxA1A546 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC1.19□□□□□ -2.22
IsxA1A546 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
IsxA1A546 Gm27013-201ENSMUST00000182441 1024 ntBASIC1.19□□□□□ -2.22
IsxA1A546 Gm27493-201ENSMUST00000184128 78 ntBASIC1.19□□□□□ -2.22
IsxA1A546 Gm27624-201ENSMUST00000185047 177 ntBASIC1.19□□□□□ -2.22
IsxA1A546 Gm28740-201ENSMUST00000186142 215 ntBASIC1.19□□□□□ -2.22
IsxA1A546 Gm29352-201ENSMUST00000188054 544 ntBASIC1.19□□□□□ -2.22
IsxA1A546 Gm37869-201ENSMUST00000193385 595 ntBASIC1.19□□□□□ -2.22
IsxA1A546 Gm37641-201ENSMUST00000193837 239 ntBASIC1.19□□□□□ -2.22
IsxA1A546 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.19□□□□□ -2.22
IsxA1A546 Gm43556-201ENSMUST00000196186 681 ntBASIC1.19□□□□□ -2.22
IsxA1A546 Gm45366-201ENSMUST00000209828 384 ntBASIC1.19□□□□□ -2.22
IsxA1A546 Gm24338-201ENSMUST00000104205 127 ntBASIC1.18□□□□□ -2.22
IsxA1A546 Gm11857-201ENSMUST00000119817 324 ntBASIC1.18□□□□□ -2.22
IsxA1A546 Gm25109-201ENSMUST00000122474 114 ntBASIC1.18□□□□□ -2.22
IsxA1A546 Gm22559-201ENSMUST00000157329 134 ntBASIC1.18□□□□□ -2.22
IsxA1A546 Gm24962-201ENSMUST00000157917 109 ntBASIC1.18□□□□□ -2.22
IsxA1A546 Gm26004-201ENSMUST00000158804 116 ntBASIC1.18□□□□□ -2.22
IsxA1A546 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.18□□□□□ -2.22
IsxA1A546 Gm22263-201ENSMUST00000180060 104 ntBASIC1.18□□□□□ -2.22
IsxA1A546 Gm28995-201ENSMUST00000186625 261 ntBASIC1.18□□□□□ -2.22
IsxA1A546 Gm38261-201ENSMUST00000192608 316 ntBASIC1.18□□□□□ -2.22
IsxA1A546 Gm44429-201ENSMUST00000203542 186 ntBASIC1.18□□□□□ -2.22
IsxA1A546 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC1.18□□□□□ -2.22
IsxA1A546 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC1.18□□□□□ -2.22
IsxA1A546 Snord118-201ENSMUST00000082965 135 ntBASIC1.18□□□□□ -2.22
IsxA1A546 Gm24536-201ENSMUST00000083144 107 ntBASIC1.18□□□□□ -2.22
IsxA1A546 Mir340-201ENSMUST00000083483 98 ntBASIC1.18□□□□□ -2.22
IsxA1A546 Gm25651-201ENSMUST00000083782 119 ntBASIC1.18□□□□□ -2.22
IsxA1A546 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
IsxA1A546 Gm24172-201ENSMUST00000104127 117 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm23015-201ENSMUST00000104145 128 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm25495-201ENSMUST00000104431 131 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm12584-201ENSMUST00000117109 1105 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm24596-201ENSMUST00000122504 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm22027-201ENSMUST00000122737 127 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC1.17□□□□□ -2.22
IsxA1A546 Gm24584-201ENSMUST00000157972 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm26405-201ENSMUST00000158495 100 ntBASIC1.17□□□□□ -2.22
IsxA1A546 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
IsxA1A546 Gm24084-201ENSMUST00000175173 137 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm25211-201ENSMUST00000177553 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm24540-201ENSMUST00000177627 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm25256-201ENSMUST00000177746 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm22822-201ENSMUST00000177941 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Rnu6-201ENSMUST00000178023 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm23151-201ENSMUST00000178061 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm25245-201ENSMUST00000178139 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm24753-201ENSMUST00000178183 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm25829-201ENSMUST00000178275 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm22092-201ENSMUST00000178290 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm24486-201ENSMUST00000178420 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm23217-201ENSMUST00000178482 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm26245-201ENSMUST00000178491 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm23610-201ENSMUST00000178659 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm23092-201ENSMUST00000178688 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm25709-201ENSMUST00000178844 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm25547-201ENSMUST00000178877 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm25312-201ENSMUST00000178972 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm24722-201ENSMUST00000179017 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm22969-201ENSMUST00000179018 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm25101-201ENSMUST00000179057 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm26378-201ENSMUST00000179093 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
IsxA1A546 Gm24873-201ENSMUST00000179101 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm23934-201ENSMUST00000179111 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm22623-201ENSMUST00000179244 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm25737-201ENSMUST00000179274 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm22618-201ENSMUST00000179376 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm24182-201ENSMUST00000179419 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm24242-201ENSMUST00000179440 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm24863-201ENSMUST00000179499 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm25064-201ENSMUST00000179535 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm22631-201ENSMUST00000179656 94 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm26295-201ENSMUST00000179690 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm23712-201ENSMUST00000179713 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm22823-201ENSMUST00000179754 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm22360-201ENSMUST00000179775 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm24978-201ENSMUST00000179782 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm24967-201ENSMUST00000179791 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm25173-201ENSMUST00000179794 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm24870-201ENSMUST00000179897 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm22288-201ENSMUST00000179904 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm22645-201ENSMUST00000180010 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm24565-201ENSMUST00000180099 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm23805-201ENSMUST00000180129 107 ntBASIC1.17□□□□□ -2.22
IsxA1A546 Gm23512-201ENSMUST00000180237 107 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms