Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
Trav11A0A0B4J1J9 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.04□□□□□ -2.24
Trav11A0A0B4J1J9 Gm25376-201ENSMUST00000104340 133 ntBASIC1.04□□□□□ -2.24
Trav11A0A0B4J1J9 Gm14937-201ENSMUST00000119709 208 ntBASIC1.04□□□□□ -2.24
Trav11A0A0B4J1J9 Gm11857-201ENSMUST00000119817 324 ntBASIC1.04□□□□□ -2.24
Trav11A0A0B4J1J9 Gm13153-201ENSMUST00000120969 637 ntBASIC1.04□□□□□ -2.24
Trav11A0A0B4J1J9 Gm16584-201ENSMUST00000159267 189 ntBASIC1.04□□□□□ -2.24
Trav11A0A0B4J1J9 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
Trav11A0A0B4J1J9 Gm9830-201ENSMUST00000178509 357 ntBASIC1.04□□□□□ -2.24
Trav11A0A0B4J1J9 Gm24390-201ENSMUST00000179578 62 ntBASIC1.04□□□□□ -2.24
Trav11A0A0B4J1J9 Gm27711-201ENSMUST00000183802 118 ntBASIC1.04□□□□□ -2.24
Trav11A0A0B4J1J9 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
Trav11A0A0B4J1J9 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.04□□□□□ -2.24
Trav11A0A0B4J1J9 Gm44844-201ENSMUST00000207242 336 ntBASIC1.04□□□□□ -2.24
Trav11A0A0B4J1J9 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
Trav11A0A0B4J1J9 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
Trav11A0A0B4J1J9 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
Trav11A0A0B4J1J9 Gm24623-201ENSMUST00000082616 194 ntBASIC1.04□□□□□ -2.24
Trav11A0A0B4J1J9 Gm24615-201ENSMUST00000083268 113 ntBASIC1.04□□□□□ -2.24
Trav11A0A0B4J1J9 Mir340-201ENSMUST00000083483 98 ntBASIC1.04□□□□□ -2.24
Trav11A0A0B4J1J9 Mir322-201ENSMUST00000083484 95 ntBASIC1.04□□□□□ -2.24
Trav11A0A0B4J1J9 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
Trav11A0A0B4J1J9 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
Trav11A0A0B4J1J9 Gm14355-201ENSMUST00000117352 264 ntBASIC1.03□□□□□ -2.24
Trav11A0A0B4J1J9 Gm14364-201ENSMUST00000129209 267 ntBASIC1.03□□□□□ -2.24
Trav11A0A0B4J1J9 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.03□□□□□ -2.24
Trav11A0A0B4J1J9 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Trav11A0A0B4J1J9 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.03□□□□□ -2.24
Trav11A0A0B4J1J9 Gm17113-201ENSMUST00000170118 171 ntBASIC1.03□□□□□ -2.24
Trav11A0A0B4J1J9 Gm25642-201ENSMUST00000175137 66 ntBASIC1.03□□□□□ -2.24
Trav11A0A0B4J1J9 Gm24315-201ENSMUST00000177835 127 ntBASIC1.03□□□□□ -2.24
Trav11A0A0B4J1J9 Gm22264-201ENSMUST00000178200 107 ntBASIC1.03□□□□□ -2.24
Trav11A0A0B4J1J9 Gm26501-201ENSMUST00000178307 107 ntBASIC1.03□□□□□ -2.24
Trav11A0A0B4J1J9 Gm23523-201ENSMUST00000180190 107 ntBASIC1.03□□□□□ -2.24
Trav11A0A0B4J1J9 Gm27385-201ENSMUST00000184747 104 ntBASIC1.03□□□□□ -2.24
Trav11A0A0B4J1J9 Gm29037-201ENSMUST00000189092 313 ntBASIC1.03□□□□□ -2.24
Trav11A0A0B4J1J9 Gm34073-201ENSMUST00000195736 212 ntBASIC1.03□□□□□ -2.24
Trav11A0A0B4J1J9 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC1.03□□□□□ -2.24
Trav11A0A0B4J1J9 Gm19441-201ENSMUST00000221545 330 ntBASIC1.03□□□□□ -2.24
Trav11A0A0B4J1J9 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.03□□□□□ -2.24
Trav11A0A0B4J1J9 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.03□□□□□ -2.24
Trav11A0A0B4J1J9 Gm26457-201ENSMUST00000082678 78 ntBASIC1.03□□□□□ -2.24
Trav11A0A0B4J1J9 Gm24536-201ENSMUST00000083144 107 ntBASIC1.03□□□□□ -2.24
Trav11A0A0B4J1J9 Gm22723-201ENSMUST00000083820 129 ntBASIC1.03□□□□□ -2.24
Trav11A0A0B4J1J9 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.03□□□□□ -2.25
Trav11A0A0B4J1J9 Mir669d-201ENSMUST00000104644 121 ntBASIC1.02□□□□□ -2.25
Trav11A0A0B4J1J9 Gm13457-201ENSMUST00000117885 267 ntBASIC1.02□□□□□ -2.25
Trav11A0A0B4J1J9 Gm12351-201ENSMUST00000118727 292 ntBASIC1.02□□□□□ -2.25
Trav11A0A0B4J1J9 Gm15115-201ENSMUST00000121145 264 ntBASIC1.02□□□□□ -2.25
Trav11A0A0B4J1J9 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.02□□□□□ -2.25
Trav11A0A0B4J1J9 Gm22537-201ENSMUST00000158172 199 ntBASIC1.02□□□□□ -2.25
Trav11A0A0B4J1J9 Gm23208-201ENSMUST00000158666 127 ntBASIC1.02□□□□□ -2.25
Trav11A0A0B4J1J9 Gm16038-201ENSMUST00000159317 193 ntBASIC1.02□□□□□ -2.25
Trav11A0A0B4J1J9 Traj60-201ENSMUST00000167781 54 ntBASIC1.02□□□□□ -2.25
Trav11A0A0B4J1J9 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC1.02□□□□□ -2.25
Trav11A0A0B4J1J9 Gm29613-201ENSMUST00000185846 313 ntBASIC1.02□□□□□ -2.25
Trav11A0A0B4J1J9 Gm29544-201ENSMUST00000188860 313 ntBASIC1.02□□□□□ -2.25
Trav11A0A0B4J1J9 Gm21064-202ENSMUST00000190583 278 ntBASIC1.02□□□□□ -2.25
Trav11A0A0B4J1J9 Gm28808-201ENSMUST00000190978 313 ntBASIC1.02□□□□□ -2.25
Trav11A0A0B4J1J9 Gm44483-201ENSMUST00000197203 97 ntBASIC1.02□□□□□ -2.25
Trav11A0A0B4J1J9 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.02□□□□□ -2.25
Trav11A0A0B4J1J9 Gm45315-201ENSMUST00000209283 333 ntBASIC1.02□□□□□ -2.25
Trav11A0A0B4J1J9 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Trav11A0A0B4J1J9 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Trav11A0A0B4J1J9 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Trav11A0A0B4J1J9 CT009718.4-201ENSMUST00000221881 109 ntBASIC1.02□□□□□ -2.25
Trav11A0A0B4J1J9 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Trav11A0A0B4J1J9 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.02□□□□□ -2.25
Trav11A0A0B4J1J9 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.01□□□□□ -2.25
Trav11A0A0B4J1J9 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.01□□□□□ -2.25
Trav11A0A0B4J1J9 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
Trav11A0A0B4J1J9 Gm26249-201ENSMUST00000116708 118 ntBASIC1.01□□□□□ -2.25
Trav11A0A0B4J1J9 Gm24915-201ENSMUST00000157288 78 ntBASIC1.01□□□□□ -2.25
Trav11A0A0B4J1J9 Gm23390-201ENSMUST00000157393 106 ntBASIC1.01□□□□□ -2.25
Trav11A0A0B4J1J9 Gm24191-201ENSMUST00000157977 122 ntBASIC1.01□□□□□ -2.25
Trav11A0A0B4J1J9 Gm22663-201ENSMUST00000158721 102 ntBASIC1.01□□□□□ -2.25
Trav11A0A0B4J1J9 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.01□□□□□ -2.25
Trav11A0A0B4J1J9 Gm17100-201ENSMUST00000168963 272 ntBASIC1.01□□□□□ -2.25
Trav11A0A0B4J1J9 Mir7679-201ENSMUST00000183379 63 ntBASIC1.01□□□□□ -2.25
Trav11A0A0B4J1J9 Mir6352-201ENSMUST00000184495 116 ntBASIC1.01□□□□□ -2.25
Trav11A0A0B4J1J9 Gm23370-201ENSMUST00000199545 130 ntBASIC1.01□□□□□ -2.25
Trav11A0A0B4J1J9 Gm45116-201ENSMUST00000207392 275 ntBASIC1.01□□□□□ -2.25
Trav11A0A0B4J1J9 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
Trav11A0A0B4J1J9 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.01□□□□□ -2.25
Trav11A0A0B4J1J9 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.01□□□□□ -2.25
Trav11A0A0B4J1J9 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.01□□□□□ -2.25
Trav11A0A0B4J1J9 Gm25586-201ENSMUST00000082499 112 ntBASIC1.01□□□□□ -2.25
Trav11A0A0B4J1J9 Gm23245-201ENSMUST00000083370 135 ntBASIC1.01□□□□□ -2.25
Trav11A0A0B4J1J9 Gm37602-201ENSMUST00000195187 3310 ntBASIC1□□□□□ -2.25
Trav11A0A0B4J1J9 Gm23109-201ENSMUST00000116867 126 ntBASIC1□□□□□ -2.25
Trav11A0A0B4J1J9 Gm6444-201ENSMUST00000119611 458 ntBASIC1□□□□□ -2.25
Trav11A0A0B4J1J9 Gm23557-201ENSMUST00000157820 138 ntBASIC1□□□□□ -2.25
Trav11A0A0B4J1J9 Gm24551-201ENSMUST00000158645 92 ntBASIC1□□□□□ -2.25
Trav11A0A0B4J1J9 Gm26024-201ENSMUST00000158657 322 ntBASIC1□□□□□ -2.25
Trav11A0A0B4J1J9 Gm23339-201ENSMUST00000158962 139 ntBASIC1□□□□□ -2.25
Trav11A0A0B4J1J9 Mir5118-201ENSMUST00000175551 67 ntBASIC1□□□□□ -2.25
Trav11A0A0B4J1J9 Gm22166-201ENSMUST00000178419 121 ntBASIC1□□□□□ -2.25
Trav11A0A0B4J1J9 Gm23288-201ENSMUST00000179213 121 ntBASIC1□□□□□ -2.25
Trav11A0A0B4J1J9 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC1□□□□□ -2.25
Trav11A0A0B4J1J9 Mir6997-201ENSMUST00000184313 71 ntBASIC1□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms