Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm22217-201ENSMUST00000157556 313 ntBASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm23557-201ENSMUST00000157820 138 ntBASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm22316-201ENSMUST00000158012 216 ntBASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm25836-201ENSMUST00000158918 123 ntBASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Snord87-201ENSMUST00000175437 87 ntBASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm21737-201ENSMUST00000178112 664 ntBASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm25121-201ENSMUST00000179846 79 ntBASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm21729-201ENSMUST00000180058 664 ntBASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm21853-201ENSMUST00000180071 664 ntBASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm20901-201ENSMUST00000180177 664 ntBASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Mir7683-201ENSMUST00000183842 61 ntBASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm28343-201ENSMUST00000185386 112 ntBASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm28383-201ENSMUST00000187563 139 ntBASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm18357-201ENSMUST00000188184 580 ntBASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm29495-201ENSMUST00000189319 664 ntBASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm28090-201ENSMUST00000189458 664 ntBASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm21647-201ENSMUST00000189755 664 ntBASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm29262-201ENSMUST00000190084 196 ntBASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm44726-201ENSMUST00000203427 217 ntBASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm45150-201ENSMUST00000206051 467 ntBASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm44655-201ENSMUST00000207768 423 ntBASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm45315-201ENSMUST00000209283 333 ntBASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm45654-201ENSMUST00000210980 123 ntBASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Mir340-201ENSMUST00000083483 98 ntBASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
Trbv1A0A0B4J1G7 Gm26396-201ENSMUST00000104093 132 ntBASIC1.21□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm14355-201ENSMUST00000117352 264 ntBASIC1.21□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm14392-201ENSMUST00000120332 401 ntBASIC1.21□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm14972-201ENSMUST00000121780 364 ntBASIC1.21□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm14413-201ENSMUST00000122158 408 ntBASIC1.21□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm24895-201ENSMUST00000122742 74 ntBASIC1.21□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm25559-201ENSMUST00000157182 74 ntBASIC1.21□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm22768-201ENSMUST00000158366 153 ntBASIC1.21□□□□□ -2.22
Trbv1A0A0B4J1G7 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.21□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm27313-201ENSMUST00000183500 142 ntBASIC1.21□□□□□ -2.22
Trbv1A0A0B4J1G7 Mir3961-201ENSMUST00000198795 59 ntBASIC1.21□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm5034-201ENSMUST00000199115 634 ntBASIC1.21□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm44429-201ENSMUST00000203542 186 ntBASIC1.21□□□□□ -2.22
Trbv1A0A0B4J1G7 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.21□□□□□ -2.22
Trbv1A0A0B4J1G7 AC120394.1-201ENSMUST00000217153 351 ntBASIC1.21□□□□□ -2.22
Trbv1A0A0B4J1G7 AC129208.2-201ENSMUST00000228506 320 ntBASIC1.21□□□□□ -2.22
Trbv1A0A0B4J1G7 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm24805-201ENSMUST00000082931 104 ntBASIC1.21□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm24977-201ENSMUST00000083106 163 ntBASIC1.21□□□□□ -2.22
Trbv1A0A0B4J1G7 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Trbv1A0A0B4J1G7 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm24079-201ENSMUST00000104352 132 ntBASIC1.2□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm14678-201ENSMUST00000121396 482 ntBASIC1.2□□□□□ -2.22
Trbv1A0A0B4J1G7 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.2□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm24577-201ENSMUST00000158580 63 ntBASIC1.2□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm24348-201ENSMUST00000158710 130 ntBASIC1.2□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm20613-201ENSMUST00000175828 345 ntBASIC1.2□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC1.2□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm29657-201ENSMUST00000189807 342 ntBASIC1.2□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm43245-201ENSMUST00000197603 468 ntBASIC1.2□□□□□ -2.22
Trbv1A0A0B4J1G7 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.2□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC1.2□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm26066-201ENSMUST00000083385 109 ntBASIC1.2□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.2□□□□□ -2.22
Trbv1A0A0B4J1G7 Mir701-201ENSMUST00000102208 109 ntBASIC1.19□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm13588-201ENSMUST00000120026 135 ntBASIC1.19□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm11891-201ENSMUST00000121241 619 ntBASIC1.19□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm24598-201ENSMUST00000122510 74 ntBASIC1.19□□□□□ -2.22
Trbv1A0A0B4J1G7 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.19□□□□□ -2.22
Trbv1A0A0B4J1G7 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC1.19□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC1.19□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm24262-201ENSMUST00000157431 144 ntBASIC1.19□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm23221-201ENSMUST00000158118 93 ntBASIC1.19□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm24726-201ENSMUST00000158232 121 ntBASIC1.19□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm22136-201ENSMUST00000158751 268 ntBASIC1.19□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm17113-201ENSMUST00000170118 171 ntBASIC1.19□□□□□ -2.22
Trbv1A0A0B4J1G7 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC1.19□□□□□ -2.22
Trbv1A0A0B4J1G7 Mir7017-201ENSMUST00000184894 62 ntBASIC1.19□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.19□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC1.19□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm37579-201ENSMUST00000194291 142 ntBASIC1.19□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm44337-201ENSMUST00000196553 114 ntBASIC1.19□□□□□ -2.22
Trbv1A0A0B4J1G7 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC1.19□□□□□ -2.22
Trbv1A0A0B4J1G7 AC147101.1-201ENSMUST00000217964 312 ntBASIC1.19□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm45815-201ENSMUST00000220241 146 ntBASIC1.19□□□□□ -2.22
Trbv1A0A0B4J1G7 AC167192.2-201ENSMUST00000224794 198 ntBASIC1.19□□□□□ -2.22
Trbv1A0A0B4J1G7 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.19□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm22972-201ENSMUST00000083297 131 ntBASIC1.19□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm23100-201ENSMUST00000083455 141 ntBASIC1.19□□□□□ -2.22
Trbv1A0A0B4J1G7 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm25207-201ENSMUST00000093745 107 ntBASIC1.19□□□□□ -2.22
Trbv1A0A0B4J1G7 Gm13439-201ENSMUST00000117541 409 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms