Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Gm44960-201ENSMUST00000207403 141 ntBASIC1.85□□□□□ -2.11
Trav1A0A075B5Z4 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC1.85□□□□□ -2.11
Trav1A0A075B5Z4 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC1.85□□□□□ -2.11
Trav1A0A075B5Z4 AC166341.3-201ENSMUST00000221861 114 ntBASIC1.85□□□□□ -2.11
Trav1A0A075B5Z4 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.85□□□□□ -2.11
Trav1A0A075B5Z4 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.85□□□□□ -2.11
Trav1A0A075B5Z4 Gm22685-201ENSMUST00000082848 106 ntBASIC1.85□□□□□ -2.11
Trav1A0A075B5Z4 Gm23731-201ENSMUST00000083749 107 ntBASIC1.85□□□□□ -2.11
Trav1A0A075B5Z4 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Trav1A0A075B5Z4 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Trav1A0A075B5Z4 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Trav1A0A075B5Z4 Gm9059-201ENSMUST00000118319 183 ntBASIC1.84□□□□□ -2.11
Trav1A0A075B5Z4 Gm12793-201ENSMUST00000119268 292 ntBASIC1.84□□□□□ -2.11
Trav1A0A075B5Z4 Gm16328-201ENSMUST00000126985 196 ntBASIC1.84□□□□□ -2.11
Trav1A0A075B5Z4 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC1.84□□□□□ -2.11
Trav1A0A075B5Z4 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC1.84□□□□□ -2.11
Trav1A0A075B5Z4 Gm26186-201ENSMUST00000157689 125 ntBASIC1.84□□□□□ -2.11
Trav1A0A075B5Z4 Gm22316-201ENSMUST00000158012 216 ntBASIC1.84□□□□□ -2.11
Trav1A0A075B5Z4 Gm23262-201ENSMUST00000158323 168 ntBASIC1.84□□□□□ -2.11
Trav1A0A075B5Z4 Gm25012-201ENSMUST00000158396 164 ntBASIC1.84□□□□□ -2.11
Trav1A0A075B5Z4 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Trav1A0A075B5Z4 Gm17100-201ENSMUST00000168963 272 ntBASIC1.84□□□□□ -2.11
Trav1A0A075B5Z4 Gm25956-201ENSMUST00000175115 217 ntBASIC1.84□□□□□ -2.11
Trav1A0A075B5Z4 Gm44010-201ENSMUST00000204432 331 ntBASIC1.84□□□□□ -2.11
Trav1A0A075B5Z4 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC1.84□□□□□ -2.11
Trav1A0A075B5Z4 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.84□□□□□ -2.11
Trav1A0A075B5Z4 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.84□□□□□ -2.11
Trav1A0A075B5Z4 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.84□□□□□ -2.11
Trav1A0A075B5Z4 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
Trav1A0A075B5Z4 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.84□□□□□ -2.11
Trav1A0A075B5Z4 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Trav1A0A075B5Z4 Gm37331-201ENSMUST00000192367 3375 ntBASIC1.84□□□□□ -2.12
Trav1A0A075B5Z4 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Trav1A0A075B5Z4 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.83□□□□□ -2.12
Trav1A0A075B5Z4 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Trav1A0A075B5Z4 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Trav1A0A075B5Z4 Gm22674-201ENSMUST00000104413 131 ntBASIC1.83□□□□□ -2.12
Trav1A0A075B5Z4 Gm11935-201ENSMUST00000118608 399 ntBASIC1.83□□□□□ -2.12
Trav1A0A075B5Z4 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.83□□□□□ -2.12
Trav1A0A075B5Z4 Gm23867-201ENSMUST00000122649 274 ntBASIC1.83□□□□□ -2.12
Trav1A0A075B5Z4 Gm23589-201ENSMUST00000157660 105 ntBASIC1.83□□□□□ -2.12
Trav1A0A075B5Z4 Gm26402-201ENSMUST00000158499 113 ntBASIC1.83□□□□□ -2.12
Trav1A0A075B5Z4 Gm23813-201ENSMUST00000175153 77 ntBASIC1.83□□□□□ -2.12
Trav1A0A075B5Z4 Gm22242-201ENSMUST00000175224 118 ntBASIC1.83□□□□□ -2.12
Trav1A0A075B5Z4 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Trav1A0A075B5Z4 Gm27905-201ENSMUST00000184005 207 ntBASIC1.83□□□□□ -2.12
Trav1A0A075B5Z4 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC1.83□□□□□ -2.12
Trav1A0A075B5Z4 Gm28995-201ENSMUST00000186625 261 ntBASIC1.83□□□□□ -2.12
Trav1A0A075B5Z4 Gm15235-201ENSMUST00000200572 194 ntBASIC1.83□□□□□ -2.12
Trav1A0A075B5Z4 Gm45207-201ENSMUST00000207469 145 ntBASIC1.83□□□□□ -2.12
Trav1A0A075B5Z4 Gm2829-201ENSMUST00000213121 499 ntBASIC1.83□□□□□ -2.12
Trav1A0A075B5Z4 AC155715.1-201ENSMUST00000213575 463 ntBASIC1.83□□□□□ -2.12
Trav1A0A075B5Z4 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC1.83□□□□□ -2.12
Trav1A0A075B5Z4 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.83□□□□□ -2.12
Trav1A0A075B5Z4 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC1.83□□□□□ -2.12
Trav1A0A075B5Z4 Gm25130-201ENSMUST00000082650 156 ntBASIC1.83□□□□□ -2.12
Trav1A0A075B5Z4 Gm25124-201ENSMUST00000083345 164 ntBASIC1.83□□□□□ -2.12
Trav1A0A075B5Z4 Mir181a-2-201ENSMUST00000083489 76 ntBASIC1.83□□□□□ -2.12
Trav1A0A075B5Z4 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Trav1A0A075B5Z4 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
Trav1A0A075B5Z4 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Trav1A0A075B5Z4 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Trav1A0A075B5Z4 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Trav1A0A075B5Z4 Gm15010-201ENSMUST00000117153 407 ntBASIC1.82□□□□□ -2.12
Trav1A0A075B5Z4 Gm12924-201ENSMUST00000121747 318 ntBASIC1.82□□□□□ -2.12
Trav1A0A075B5Z4 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.82□□□□□ -2.12
Trav1A0A075B5Z4 Gm25543-201ENSMUST00000122678 312 ntBASIC1.82□□□□□ -2.12
Trav1A0A075B5Z4 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC1.82□□□□□ -2.12
Trav1A0A075B5Z4 Gm24304-201ENSMUST00000177635 107 ntBASIC1.82□□□□□ -2.12
Trav1A0A075B5Z4 Mir6901-201ENSMUST00000185062 62 ntBASIC1.82□□□□□ -2.12
Trav1A0A075B5Z4 Gm27979-201ENSMUST00000185126 56 ntBASIC1.82□□□□□ -2.12
Trav1A0A075B5Z4 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.82□□□□□ -2.12
Trav1A0A075B5Z4 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC1.82□□□□□ -2.12
Trav1A0A075B5Z4 Gm28288-201ENSMUST00000191019 214 ntBASIC1.82□□□□□ -2.12
Trav1A0A075B5Z4 Gm37338-201ENSMUST00000191986 127 ntBASIC1.82□□□□□ -2.12
Trav1A0A075B5Z4 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC1.82□□□□□ -2.12
Trav1A0A075B5Z4 Gm19118-201ENSMUST00000222554 98 ntBASIC1.82□□□□□ -2.12
Trav1A0A075B5Z4 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.82□□□□□ -2.12
Trav1A0A075B5Z4 AC117588.2-201ENSMUST00000228340 311 ntBASIC1.82□□□□□ -2.12
Trav1A0A075B5Z4 Gm26329-201ENSMUST00000093723 110 ntBASIC1.82□□□□□ -2.12
Trav1A0A075B5Z4 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Trav1A0A075B5Z4 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Trav1A0A075B5Z4 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Trav1A0A075B5Z4 Mir344e-201ENSMUST00000104677 66 ntBASIC1.81□□□□□ -2.12
Trav1A0A075B5Z4 Gm14894-201ENSMUST00000117170 270 ntBASIC1.81□□□□□ -2.12
Trav1A0A075B5Z4 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC1.81□□□□□ -2.12
Trav1A0A075B5Z4 Gm13729-201ENSMUST00000120328 406 ntBASIC1.81□□□□□ -2.12
Trav1A0A075B5Z4 Gm14761-201ENSMUST00000121363 262 ntBASIC1.81□□□□□ -2.12
Trav1A0A075B5Z4 Gm24813-201ENSMUST00000175310 84 ntBASIC1.81□□□□□ -2.12
Trav1A0A075B5Z4 Gm24618-201ENSMUST00000177718 94 ntBASIC1.81□□□□□ -2.12
Trav1A0A075B5Z4 Gm24308-201ENSMUST00000177773 114 ntBASIC1.81□□□□□ -2.12
Trav1A0A075B5Z4 Gm23953-201ENSMUST00000178214 94 ntBASIC1.81□□□□□ -2.12
Trav1A0A075B5Z4 Hmga1b-202ENSMUST00000178955 120 ntBASIC1.81□□□□□ -2.12
Trav1A0A075B5Z4 Gm26332-201ENSMUST00000179813 94 ntBASIC1.81□□□□□ -2.12
Trav1A0A075B5Z4 Gm22863-201ENSMUST00000180265 94 ntBASIC1.81□□□□□ -2.12
Trav1A0A075B5Z4 Gm28257-201ENSMUST00000185244 463 ntBASIC1.81□□□□□ -2.12
Trav1A0A075B5Z4 Gm29005-201ENSMUST00000186773 320 ntBASIC1.81□□□□□ -2.12
Trav1A0A075B5Z4 Gm28848-201ENSMUST00000189984 168 ntBASIC1.81□□□□□ -2.12
Trav1A0A075B5Z4 Gm28408-201ENSMUST00000191557 463 ntBASIC1.81□□□□□ -2.12
Trav1A0A075B5Z4 Gm37449-201ENSMUST00000193016 270 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms