Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC2.09□□□□□ -2.07
H2afb1S4R1E0 Gm28995-201ENSMUST00000186625 261 ntBASIC2.09□□□□□ -2.07
H2afb1S4R1E0 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC2.09□□□□□ -2.07
H2afb1S4R1E0 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC2.09□□□□□ -2.07
H2afb1S4R1E0 Gm45207-201ENSMUST00000207469 145 ntBASIC2.09□□□□□ -2.07
H2afb1S4R1E0 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC2.09□□□□□ -2.07
H2afb1S4R1E0 AC138290.2-201ENSMUST00000218822 369 ntBASIC2.09□□□□□ -2.07
H2afb1S4R1E0 AC122905.2-201ENSMUST00000220325 269 ntBASIC2.09□□□□□ -2.07
H2afb1S4R1E0 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC2.09□□□□□ -2.07
H2afb1S4R1E0 AC130829.3-201ENSMUST00000222735 154 ntBASIC2.09□□□□□ -2.07
H2afb1S4R1E0 AC133156.1-202ENSMUST00000227284 363 ntBASIC2.09□□□□□ -2.07
H2afb1S4R1E0 Gm23378-201ENSMUST00000082942 107 ntBASIC2.09□□□□□ -2.07
H2afb1S4R1E0 CT030170.3-201ENSMUST00000221205 1815 ntBASIC2.09□□□□□ -2.08
H2afb1S4R1E0 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC2.09□□□□□ -2.08
H2afb1S4R1E0 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.08□□□□□ -2.08
H2afb1S4R1E0 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.08□□□□□ -2.08
H2afb1S4R1E0 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.08□□□□□ -2.08
H2afb1S4R1E0 Gm24338-201ENSMUST00000104205 127 ntBASIC2.08□□□□□ -2.08
H2afb1S4R1E0 Gm11606-201ENSMUST00000120706 617 ntBASIC2.08□□□□□ -2.08
H2afb1S4R1E0 Gm23469-201ENSMUST00000157131 104 ntBASIC2.08□□□□□ -2.08
H2afb1S4R1E0 Gm22538-201ENSMUST00000158169 299 ntBASIC2.08□□□□□ -2.08
H2afb1S4R1E0 Gm25866-201ENSMUST00000158245 112 ntBASIC2.08□□□□□ -2.08
H2afb1S4R1E0 Mir6355-201ENSMUST00000183687 106 ntBASIC2.08□□□□□ -2.08
H2afb1S4R1E0 Gm29604-201ENSMUST00000187176 163 ntBASIC2.08□□□□□ -2.08
H2afb1S4R1E0 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.08□□□□□ -2.08
H2afb1S4R1E0 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
H2afb1S4R1E0 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.08□□□□□ -2.08
H2afb1S4R1E0 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.08□□□□□ -2.08
H2afb1S4R1E0 Gm23970-201ENSMUST00000083319 107 ntBASIC2.08□□□□□ -2.08
H2afb1S4R1E0 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
H2afb1S4R1E0 Gm22270-201ENSMUST00000104034 132 ntBASIC2.07□□□□□ -2.08
H2afb1S4R1E0 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.07□□□□□ -2.08
H2afb1S4R1E0 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC2.07□□□□□ -2.08
H2afb1S4R1E0 Gm22216-201ENSMUST00000157557 114 ntBASIC2.07□□□□□ -2.08
H2afb1S4R1E0 Gm24005-201ENSMUST00000158459 296 ntBASIC2.07□□□□□ -2.08
H2afb1S4R1E0 Gm25653-201ENSMUST00000158473 138 ntBASIC2.07□□□□□ -2.08
H2afb1S4R1E0 Gm24769-201ENSMUST00000158506 129 ntBASIC2.07□□□□□ -2.08
H2afb1S4R1E0 Gm22114-201ENSMUST00000177756 107 ntBASIC2.07□□□□□ -2.08
H2afb1S4R1E0 Gm43583-201ENSMUST00000199235 303 ntBASIC2.07□□□□□ -2.08
H2afb1S4R1E0 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.07□□□□□ -2.08
H2afb1S4R1E0 AC166341.3-201ENSMUST00000221861 114 ntBASIC2.07□□□□□ -2.08
H2afb1S4R1E0 Gm23406-201ENSMUST00000082537 122 ntBASIC2.07□□□□□ -2.08
H2afb1S4R1E0 Gm24764-201ENSMUST00000083686 199 ntBASIC2.07□□□□□ -2.08
H2afb1S4R1E0 Gm25651-201ENSMUST00000083782 119 ntBASIC2.07□□□□□ -2.08
H2afb1S4R1E0 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
H2afb1S4R1E0 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.07□□□□□ -2.08
H2afb1S4R1E0 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
H2afb1S4R1E0 Gm14774-201ENSMUST00000117857 536 ntBASIC2.06□□□□□ -2.08
H2afb1S4R1E0 Gm11935-201ENSMUST00000118608 399 ntBASIC2.06□□□□□ -2.08
H2afb1S4R1E0 Gm24892-201ENSMUST00000122747 104 ntBASIC2.06□□□□□ -2.08
H2afb1S4R1E0 Gm24900-201ENSMUST00000158128 134 ntBASIC2.06□□□□□ -2.08
H2afb1S4R1E0 Gm23262-201ENSMUST00000158323 168 ntBASIC2.06□□□□□ -2.08
H2afb1S4R1E0 Gm22113-201ENSMUST00000158343 104 ntBASIC2.06□□□□□ -2.08
H2afb1S4R1E0 Gm16561-201ENSMUST00000163001 192 ntBASIC2.06□□□□□ -2.08
H2afb1S4R1E0 Gm23003-201ENSMUST00000179948 107 ntBASIC2.06□□□□□ -2.08
H2afb1S4R1E0 Mir6399-201ENSMUST00000184050 84 ntBASIC2.06□□□□□ -2.08
H2afb1S4R1E0 Gm29005-201ENSMUST00000186773 320 ntBASIC2.06□□□□□ -2.08
H2afb1S4R1E0 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.06□□□□□ -2.08
H2afb1S4R1E0 Mir7661-201ENSMUST00000197023 61 ntBASIC2.06□□□□□ -2.08
H2afb1S4R1E0 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.06□□□□□ -2.08
H2afb1S4R1E0 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.06□□□□□ -2.08
H2afb1S4R1E0 Gm44858-201ENSMUST00000207360 154 ntBASIC2.06□□□□□ -2.08
H2afb1S4R1E0 Gm44960-201ENSMUST00000207403 141 ntBASIC2.06□□□□□ -2.08
H2afb1S4R1E0 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
H2afb1S4R1E0 Gm23731-201ENSMUST00000083749 107 ntBASIC2.06□□□□□ -2.08
H2afb1S4R1E0 Gm26107-201ENSMUST00000083972 107 ntBASIC2.06□□□□□ -2.08
H2afb1S4R1E0 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
H2afb1S4R1E0 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
H2afb1S4R1E0 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
H2afb1S4R1E0 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
H2afb1S4R1E0 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.05□□□□□ -2.08
H2afb1S4R1E0 Mdga2-203ENSMUST00000113942 423 ntBASIC2.05□□□□□ -2.08
H2afb1S4R1E0 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC2.05□□□□□ -2.08
H2afb1S4R1E0 Gm26105-201ENSMUST00000157253 190 ntBASIC2.05□□□□□ -2.08
H2afb1S4R1E0 Gm24691-201ENSMUST00000157762 140 ntBASIC2.05□□□□□ -2.08
H2afb1S4R1E0 Gm25012-201ENSMUST00000158396 164 ntBASIC2.05□□□□□ -2.08
H2afb1S4R1E0 Gm20660-201ENSMUST00000177515 289 ntBASIC2.05□□□□□ -2.08
H2afb1S4R1E0 Gm24388-201ENSMUST00000177872 107 ntBASIC2.05□□□□□ -2.08
H2afb1S4R1E0 Mir7k-201ENSMUST00000184115 110 ntBASIC2.05□□□□□ -2.08
H2afb1S4R1E0 Gm28282-201ENSMUST00000186072 186 ntBASIC2.05□□□□□ -2.08
H2afb1S4R1E0 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC2.05□□□□□ -2.08
H2afb1S4R1E0 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.05□□□□□ -2.08
H2afb1S4R1E0 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
H2afb1S4R1E0 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC2.05□□□□□ -2.08
H2afb1S4R1E0 Gm7065-201ENSMUST00000222150 474 ntBASIC2.05□□□□□ -2.08
H2afb1S4R1E0 Gm24460-201ENSMUST00000082731 106 ntBASIC2.05□□□□□ -2.08
H2afb1S4R1E0 Gm24316-201ENSMUST00000083041 107 ntBASIC2.05□□□□□ -2.08
H2afb1S4R1E0 Gm24661-201ENSMUST00000083205 104 ntBASIC2.05□□□□□ -2.08
H2afb1S4R1E0 Gm23041-201ENSMUST00000083868 106 ntBASIC2.05□□□□□ -2.08
H2afb1S4R1E0 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
H2afb1S4R1E0 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.05□□□□□ -2.08
H2afb1S4R1E0 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
H2afb1S4R1E0 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.05□□□□□ -2.08
H2afb1S4R1E0 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
H2afb1S4R1E0 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
H2afb1S4R1E0 Gm12304-201ENSMUST00000120312 385 ntBASIC2.04□□□□□ -2.08
H2afb1S4R1E0 Gm24726-201ENSMUST00000158232 121 ntBASIC2.04□□□□□ -2.08
H2afb1S4R1E0 Gm16326-201ENSMUST00000162843 414 ntBASIC2.04□□□□□ -2.08
H2afb1S4R1E0 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC2.04□□□□□ -2.08
H2afb1S4R1E0 Gm25457-201ENSMUST00000179509 107 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms