Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC0.68□□□□□ -2.3
Scn8aQ9WTU3 Gm37578-201ENSMUST00000192256 1177 ntBASIC0.68□□□□□ -2.3
Scn8aQ9WTU3 Gm42509-201ENSMUST00000197390 781 ntBASIC0.68□□□□□ -2.3
Scn8aQ9WTU3 Gm17990-201ENSMUST00000211728 553 ntBASIC0.68□□□□□ -2.3
Scn8aQ9WTU3 CT025689.3-201ENSMUST00000223817 301 ntBASIC0.68□□□□□ -2.3
Scn8aQ9WTU3 Gm25088-201ENSMUST00000101803 79 ntBASIC0.68□□□□□ -2.3
Scn8aQ9WTU3 Gm12304-201ENSMUST00000120312 385 ntBASIC0.68□□□□□ -2.3
Scn8aQ9WTU3 Defa-ps13-201ENSMUST00000120695 204 ntBASIC0.68□□□□□ -2.3
Scn8aQ9WTU3 Rnu7-201ENSMUST00000158458 62 ntBASIC0.68□□□□□ -2.3
Scn8aQ9WTU3 Gm23208-201ENSMUST00000158666 127 ntBASIC0.68□□□□□ -2.3
Scn8aQ9WTU3 Gm24168-201ENSMUST00000178825 107 ntBASIC0.68□□□□□ -2.3
Scn8aQ9WTU3 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC0.68□□□□□ -2.3
Scn8aQ9WTU3 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC0.68□□□□□ -2.3
Scn8aQ9WTU3 Gm37709-201ENSMUST00000195074 600 ntBASIC0.68□□□□□ -2.3
Scn8aQ9WTU3 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
Scn8aQ9WTU3 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.68□□□□□ -2.3
Scn8aQ9WTU3 Snord118-201ENSMUST00000082965 135 ntBASIC0.68□□□□□ -2.3
Scn8aQ9WTU3 Mir19a-201ENSMUST00000083482 82 ntBASIC0.68□□□□□ -2.3
Scn8aQ9WTU3 Gm23708-201ENSMUST00000104367 123 ntBASIC0.67□□□□□ -2.3
Scn8aQ9WTU3 Mir467h-201ENSMUST00000116759 121 ntBASIC0.67□□□□□ -2.3
Scn8aQ9WTU3 Gm14359-201ENSMUST00000118883 424 ntBASIC0.67□□□□□ -2.3
Scn8aQ9WTU3 Gm9498-201ENSMUST00000140849 291 ntBASIC0.67□□□□□ -2.3
Scn8aQ9WTU3 Gm14368-201ENSMUST00000145305 415 ntBASIC0.67□□□□□ -2.3
Scn8aQ9WTU3 Gm22221-201ENSMUST00000157362 103 ntBASIC0.67□□□□□ -2.3
Scn8aQ9WTU3 Gm23277-201ENSMUST00000157914 136 ntBASIC0.67□□□□□ -2.3
Scn8aQ9WTU3 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
Scn8aQ9WTU3 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC0.67□□□□□ -2.3
Scn8aQ9WTU3 Gm5116-201ENSMUST00000187732 463 ntBASIC0.67□□□□□ -2.3
Scn8aQ9WTU3 Gm29627-201ENSMUST00000187984 463 ntBASIC0.67□□□□□ -2.3
Scn8aQ9WTU3 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC0.67□□□□□ -2.3
Scn8aQ9WTU3 CT485612.4-201ENSMUST00000223405 250 ntBASIC0.67□□□□□ -2.3
Scn8aQ9WTU3 Gm22005-201ENSMUST00000082795 141 ntBASIC0.67□□□□□ -2.3
Scn8aQ9WTU3 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
Scn8aQ9WTU3 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.67□□□□□ -2.3
Scn8aQ9WTU3 Gm24079-201ENSMUST00000104352 132 ntBASIC0.66□□□□□ -2.3
Scn8aQ9WTU3 Gm15214-201ENSMUST00000122155 470 ntBASIC0.66□□□□□ -2.3
Scn8aQ9WTU3 Gm23120-201ENSMUST00000157654 287 ntBASIC0.66□□□□□ -2.3
Scn8aQ9WTU3 Gm22163-201ENSMUST00000158408 135 ntBASIC0.66□□□□□ -2.3
Scn8aQ9WTU3 Gm24713-201ENSMUST00000178850 107 ntBASIC0.66□□□□□ -2.3
Scn8aQ9WTU3 Gm25448-201ENSMUST00000180065 107 ntBASIC0.66□□□□□ -2.3
Scn8aQ9WTU3 Gm43004-201ENSMUST00000201872 703 ntBASIC0.66□□□□□ -2.3
Scn8aQ9WTU3 Gm44655-201ENSMUST00000207768 423 ntBASIC0.66□□□□□ -2.3
Scn8aQ9WTU3 AC091260.1-201ENSMUST00000216112 229 ntBASIC0.66□□□□□ -2.3
Scn8aQ9WTU3 Gm22575-201ENSMUST00000082981 110 ntBASIC0.66□□□□□ -2.3
Scn8aQ9WTU3 Gm24784-201ENSMUST00000157640 62 ntBASIC0.66□□□□□ -2.3
Scn8aQ9WTU3 Gm22339-201ENSMUST00000157718 62 ntBASIC0.66□□□□□ -2.3
Scn8aQ9WTU3 Gm24851-201ENSMUST00000158028 103 ntBASIC0.66□□□□□ -2.3
Scn8aQ9WTU3 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC0.66□□□□□ -2.3
Scn8aQ9WTU3 Gm15914-201ENSMUST00000161922 309 ntBASIC0.66□□□□□ -2.3
Scn8aQ9WTU3 Gm38388-201ENSMUST00000195569 1430 ntBASIC0.66□□□□□ -2.3
Scn8aQ9WTU3 Gm42805-201ENSMUST00000196158 276 ntBASIC0.66□□□□□ -2.3
Scn8aQ9WTU3 Gm26328-201ENSMUST00000082821 107 ntBASIC0.66□□□□□ -2.3
Scn8aQ9WTU3 Gm24615-201ENSMUST00000083268 113 ntBASIC0.66□□□□□ -2.3
Scn8aQ9WTU3 Gm25794-201ENSMUST00000083286 107 ntBASIC0.66□□□□□ -2.3
Scn8aQ9WTU3 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.66□□□□□ -2.3
Scn8aQ9WTU3 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.65□□□□□ -2.3
Scn8aQ9WTU3 Gm15175-201ENSMUST00000117629 132 ntBASIC0.65□□□□□ -2.31
Scn8aQ9WTU3 Gm14624-201ENSMUST00000117746 192 ntBASIC0.65□□□□□ -2.31
Scn8aQ9WTU3 Gm13356-201ENSMUST00000121678 335 ntBASIC0.65□□□□□ -2.31
Scn8aQ9WTU3 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC0.65□□□□□ -2.31
Scn8aQ9WTU3 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC0.65□□□□□ -2.31
Scn8aQ9WTU3 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
Scn8aQ9WTU3 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC0.65□□□□□ -2.31
Scn8aQ9WTU3 Gm37599-201ENSMUST00000193067 489 ntBASIC0.65□□□□□ -2.31
Scn8aQ9WTU3 AC069561.2-201ENSMUST00000217596 420 ntBASIC0.65□□□□□ -2.31
Scn8aQ9WTU3 AC112935.1-201ENSMUST00000227603 250 ntBASIC0.65□□□□□ -2.31
Scn8aQ9WTU3 Gm10092-201ENSMUST00000077110 180 ntBASIC0.65□□□□□ -2.31
Scn8aQ9WTU3 Snord1a-201ENSMUST00000083160 74 ntBASIC0.65□□□□□ -2.31
Scn8aQ9WTU3 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
Scn8aQ9WTU3 Gm14551-201ENSMUST00000120802 256 ntBASIC0.65□□□□□ -2.31
Scn8aQ9WTU3 Gm14980-201ENSMUST00000121247 736 ntBASIC0.65□□□□□ -2.31
Scn8aQ9WTU3 Gm23078-201ENSMUST00000157848 148 ntBASIC0.65□□□□□ -2.31
Scn8aQ9WTU3 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.65□□□□□ -2.31
Scn8aQ9WTU3 Gm29661-201ENSMUST00000186781 315 ntBASIC0.65□□□□□ -2.31
Scn8aQ9WTU3 Gm29216-201ENSMUST00000187117 492 ntBASIC0.65□□□□□ -2.31
Scn8aQ9WTU3 Gm29308-201ENSMUST00000188863 315 ntBASIC0.65□□□□□ -2.31
Scn8aQ9WTU3 Gm37727-201ENSMUST00000191637 819 ntBASIC0.65□□□□□ -2.31
Scn8aQ9WTU3 Gm38113-201ENSMUST00000193704 201 ntBASIC0.65□□□□□ -2.31
Scn8aQ9WTU3 Gm46136-201ENSMUST00000214730 565 ntBASIC0.65□□□□□ -2.31
Scn8aQ9WTU3 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
Scn8aQ9WTU3 Gm23102-201ENSMUST00000083724 116 ntBASIC0.65□□□□□ -2.31
Scn8aQ9WTU3 Gm8858-201ENSMUST00000118259 342 ntBASIC0.64□□□□□ -2.31
Scn8aQ9WTU3 Gm23829-201ENSMUST00000157392 270 ntBASIC0.64□□□□□ -2.31
Scn8aQ9WTU3 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
Scn8aQ9WTU3 Gm18696-201ENSMUST00000220103 274 ntBASIC0.64□□□□□ -2.31
Scn8aQ9WTU3 Gm21937-201ENSMUST00000222825 218 ntBASIC0.64□□□□□ -2.31
Scn8aQ9WTU3 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
Scn8aQ9WTU3 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC0.64□□□□□ -2.31
Scn8aQ9WTU3 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Scn8aQ9WTU3 Gm23854-201ENSMUST00000158378 108 ntBASIC0.63□□□□□ -2.31
Scn8aQ9WTU3 Gm20630-201ENSMUST00000177387 551 ntBASIC0.63□□□□□ -2.31
Scn8aQ9WTU3 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC0.63□□□□□ -2.31
Scn8aQ9WTU3 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC0.63□□□□□ -2.31
Scn8aQ9WTU3 Gm24445-201ENSMUST00000083981 107 ntBASIC0.63□□□□□ -2.31
Scn8aQ9WTU3 Gm11358-201ENSMUST00000122310 373 ntBASIC0.63□□□□□ -2.31
Scn8aQ9WTU3 Gm24896-201ENSMUST00000122741 135 ntBASIC0.63□□□□□ -2.31
Scn8aQ9WTU3 n-R5s187-201ENSMUST00000122769 111 ntBASIC0.63□□□□□ -2.31
Scn8aQ9WTU3 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC0.63□□□□□ -2.31
Scn8aQ9WTU3 Gm24464-201ENSMUST00000179697 107 ntBASIC0.63□□□□□ -2.31
Scn8aQ9WTU3 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 104.6 ms