Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.82□□□□□ -2.12
Trim3Q9R1R2 Gm23246-201ENSMUST00000083371 67 ntBASIC1.82□□□□□ -2.12
Trim3Q9R1R2 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.82□□□□□ -2.12
Trim3Q9R1R2 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
Trim3Q9R1R2 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
Trim3Q9R1R2 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.82□□□□□ -2.12
Trim3Q9R1R2 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Trim3Q9R1R2 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Trim3Q9R1R2 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Trim3Q9R1R2 Gm22678-201ENSMUST00000116974 101 ntBASIC1.81□□□□□ -2.12
Trim3Q9R1R2 Gm5396-201ENSMUST00000121222 532 ntBASIC1.81□□□□□ -2.12
Trim3Q9R1R2 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.81□□□□□ -2.12
Trim3Q9R1R2 Trav20-201ENSMUST00000142754 347 ntBASIC1.81□□□□□ -2.12
Trim3Q9R1R2 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC1.81□□□□□ -2.12
Trim3Q9R1R2 Gm25486-201ENSMUST00000158726 63 ntBASIC1.81□□□□□ -2.12
Trim3Q9R1R2 Gm5900-201ENSMUST00000179862 375 ntBASIC1.81□□□□□ -2.12
Trim3Q9R1R2 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC1.81□□□□□ -2.12
Trim3Q9R1R2 Gm27511-201ENSMUST00000183502 127 ntBASIC1.81□□□□□ -2.12
Trim3Q9R1R2 Mir7118-201ENSMUST00000197760 61 ntBASIC1.81□□□□□ -2.12
Trim3Q9R1R2 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.81□□□□□ -2.12
Trim3Q9R1R2 Gm44533-201ENSMUST00000207782 268 ntBASIC1.81□□□□□ -2.12
Trim3Q9R1R2 Gm23627-201ENSMUST00000082459 107 ntBASIC1.81□□□□□ -2.12
Trim3Q9R1R2 Gm22502-201ENSMUST00000082488 107 ntBASIC1.81□□□□□ -2.12
Trim3Q9R1R2 Gm22977-201ENSMUST00000082615 107 ntBASIC1.81□□□□□ -2.12
Trim3Q9R1R2 Gm24149-201ENSMUST00000082757 107 ntBASIC1.81□□□□□ -2.12
Trim3Q9R1R2 Gm26126-201ENSMUST00000083188 164 ntBASIC1.81□□□□□ -2.12
Trim3Q9R1R2 Gm3867-201ENSMUST00000086108 279 ntBASIC1.81□□□□□ -2.12
Trim3Q9R1R2 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.81□□□□□ -2.12
Trim3Q9R1R2 Gm15303-201ENSMUST00000118676 2624 ntBASIC1.8□□□□□ -2.12
Trim3Q9R1R2 Gm25090-201ENSMUST00000104000 132 ntBASIC1.8□□□□□ -2.12
Trim3Q9R1R2 Snord98-201ENSMUST00000116819 65 ntBASIC1.8□□□□□ -2.12
Trim3Q9R1R2 Gm14269-201ENSMUST00000120455 306 ntBASIC1.8□□□□□ -2.12
Trim3Q9R1R2 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Trim3Q9R1R2 Gm23169-201ENSMUST00000157157 112 ntBASIC1.8□□□□□ -2.12
Trim3Q9R1R2 Gm24837-201ENSMUST00000158683 81 ntBASIC1.8□□□□□ -2.12
Trim3Q9R1R2 Gm26180-201ENSMUST00000179942 107 ntBASIC1.8□□□□□ -2.12
Trim3Q9R1R2 Gm37054-201ENSMUST00000193481 543 ntBASIC1.8□□□□□ -2.12
Trim3Q9R1R2 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Trim3Q9R1R2 Gm25820-202ENSMUST00000197479 128 ntBASIC1.8□□□□□ -2.12
Trim3Q9R1R2 Gm44128-201ENSMUST00000204909 219 ntBASIC1.8□□□□□ -2.12
Trim3Q9R1R2 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.8□□□□□ -2.12
Trim3Q9R1R2 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Trim3Q9R1R2 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.8□□□□□ -2.12
Trim3Q9R1R2 Gm22062-201ENSMUST00000082563 107 ntBASIC1.8□□□□□ -2.12
Trim3Q9R1R2 Gm25801-201ENSMUST00000082638 106 ntBASIC1.8□□□□□ -2.12
Trim3Q9R1R2 Gm24165-201ENSMUST00000082718 128 ntBASIC1.8□□□□□ -2.12
Trim3Q9R1R2 Mir107-201ENSMUST00000083660 87 ntBASIC1.8□□□□□ -2.12
Trim3Q9R1R2 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
Trim3Q9R1R2 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Trim3Q9R1R2 Gm24338-201ENSMUST00000104205 127 ntBASIC1.79□□□□□ -2.12
Trim3Q9R1R2 Gm14624-201ENSMUST00000117746 192 ntBASIC1.79□□□□□ -2.12
Trim3Q9R1R2 Gm11512-201ENSMUST00000119669 663 ntBASIC1.79□□□□□ -2.12
Trim3Q9R1R2 Gm15365-201ENSMUST00000122392 300 ntBASIC1.79□□□□□ -2.12
Trim3Q9R1R2 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC1.79□□□□□ -2.12
Trim3Q9R1R2 Snord11-201ENSMUST00000158468 84 ntBASIC1.79□□□□□ -2.12
Trim3Q9R1R2 Gm17161-201ENSMUST00000169187 524 ntBASIC1.79□□□□□ -2.12
Trim3Q9R1R2 Gm26194-201ENSMUST00000175036 71 ntBASIC1.79□□□□□ -2.12
Trim3Q9R1R2 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC1.79□□□□□ -2.12
Trim3Q9R1R2 Gm22308-201ENSMUST00000177609 107 ntBASIC1.79□□□□□ -2.12
Trim3Q9R1R2 Gm21737-201ENSMUST00000178112 664 ntBASIC1.79□□□□□ -2.12
Trim3Q9R1R2 Gm25933-201ENSMUST00000178943 108 ntBASIC1.79□□□□□ -2.12
Trim3Q9R1R2 Gm20901-201ENSMUST00000180177 664 ntBASIC1.79□□□□□ -2.12
Trim3Q9R1R2 Mir6950-201ENSMUST00000184438 73 ntBASIC1.79□□□□□ -2.12
Trim3Q9R1R2 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Trim3Q9R1R2 Gm28090-201ENSMUST00000189458 664 ntBASIC1.79□□□□□ -2.12
Trim3Q9R1R2 Gm21647-201ENSMUST00000189755 664 ntBASIC1.79□□□□□ -2.12
Trim3Q9R1R2 Gm18291-201ENSMUST00000190791 301 ntBASIC1.79□□□□□ -2.12
Trim3Q9R1R2 Gm37128-201ENSMUST00000192599 232 ntBASIC1.79□□□□□ -2.12
Trim3Q9R1R2 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.79□□□□□ -2.12
Trim3Q9R1R2 Gm43676-201ENSMUST00000197532 540 ntBASIC1.79□□□□□ -2.12
Trim3Q9R1R2 Gm42807-201ENSMUST00000200141 329 ntBASIC1.79□□□□□ -2.12
Trim3Q9R1R2 Gm45403-201ENSMUST00000209453 276 ntBASIC1.79□□□□□ -2.12
Trim3Q9R1R2 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC1.79□□□□□ -2.12
Trim3Q9R1R2 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.79□□□□□ -2.12
Trim3Q9R1R2 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.79□□□□□ -2.12
Trim3Q9R1R2 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.79□□□□□ -2.12
Trim3Q9R1R2 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.79□□□□□ -2.12
Trim3Q9R1R2 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.79□□□□□ -2.12
Trim3Q9R1R2 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Trim3Q9R1R2 Gm22997-201ENSMUST00000082845 107 ntBASIC1.79□□□□□ -2.12
Trim3Q9R1R2 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.79□□□□□ -2.12
Trim3Q9R1R2 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Trim3Q9R1R2 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.79□□□□□ -2.12
Trim3Q9R1R2 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Trim3Q9R1R2 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Trim3Q9R1R2 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.78□□□□□ -2.12
Trim3Q9R1R2 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Trim3Q9R1R2 Gm22750-201ENSMUST00000102076 103 ntBASIC1.78□□□□□ -2.12
Trim3Q9R1R2 Gm23950-201ENSMUST00000104026 129 ntBASIC1.78□□□□□ -2.12
Trim3Q9R1R2 Gm6444-201ENSMUST00000119611 458 ntBASIC1.78□□□□□ -2.12
Trim3Q9R1R2 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.78□□□□□ -2.12
Trim3Q9R1R2 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC1.78□□□□□ -2.12
Trim3Q9R1R2 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.78□□□□□ -2.12
Trim3Q9R1R2 Gm23589-201ENSMUST00000157660 105 ntBASIC1.78□□□□□ -2.12
Trim3Q9R1R2 Gm22803-201ENSMUST00000158049 283 ntBASIC1.78□□□□□ -2.12
Trim3Q9R1R2 Gm25994-201ENSMUST00000175392 101 ntBASIC1.78□□□□□ -2.12
Trim3Q9R1R2 Gm21885-201ENSMUST00000178891 327 ntBASIC1.78□□□□□ -2.12
Trim3Q9R1R2 Gm26864-201ENSMUST00000181346 156 ntBASIC1.78□□□□□ -2.12
Trim3Q9R1R2 Mir7014-201ENSMUST00000183853 63 ntBASIC1.78□□□□□ -2.12
Trim3Q9R1R2 Gm28925-201ENSMUST00000188586 168 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 143.1 ms