Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Neat1-201ENSMUST00000173672 20771 ntBASIC3.89□□□□□ -1.79
Nubp1Q9R060 Gm44542-201ENSMUST00000208677 4314 ntBASIC3.89□□□□□ -1.79
Nubp1Q9R060 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Nubp1Q9R060 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Nubp1Q9R060 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Nubp1Q9R060 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Nubp1Q9R060 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Nubp1Q9R060 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
Nubp1Q9R060 Gm43658-201ENSMUST00000202348 4176 ntBASIC3.88□□□□□ -1.79
Nubp1Q9R060 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Nubp1Q9R060 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC3.88□□□□□ -1.79
Nubp1Q9R060 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Nubp1Q9R060 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Nubp1Q9R060 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
Nubp1Q9R060 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Nubp1Q9R060 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.88□□□□□ -1.79
Nubp1Q9R060 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC3.88□□□□□ -1.79
Nubp1Q9R060 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC3.88□□□□□ -1.79
Nubp1Q9R060 Gm26005-201ENSMUST00000158802 134 ntBASIC3.88□□□□□ -1.79
Nubp1Q9R060 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.88□□□□□ -1.79
Nubp1Q9R060 Gm44485-201ENSMUST00000199569 137 ntBASIC3.88□□□□□ -1.79
Nubp1Q9R060 Gm44879-201ENSMUST00000207007 503 ntBASIC3.88□□□□□ -1.79
Nubp1Q9R060 Gm46998-201ENSMUST00000221444 330 ntBASIC3.88□□□□□ -1.79
Nubp1Q9R060 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.88□□□□□ -1.79
Nubp1Q9R060 AC160756.1-201ENSMUST00000227266 235 ntBASIC3.88□□□□□ -1.79
Nubp1Q9R060 Gm25140-201ENSMUST00000083254 140 ntBASIC3.88□□□□□ -1.79
Nubp1Q9R060 Gm23847-201ENSMUST00000083829 110 ntBASIC3.88□□□□□ -1.79
Nubp1Q9R060 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Nubp1Q9R060 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Nubp1Q9R060 Gm38152-201ENSMUST00000195389 3566 ntBASIC3.88□□□□□ -1.79
Nubp1Q9R060 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Nubp1Q9R060 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Nubp1Q9R060 Gm13885-201ENSMUST00000117569 187 ntBASIC3.87□□□□□ -1.79
Nubp1Q9R060 Cox20-ps-201ENSMUST00000119872 353 ntBASIC3.87□□□□□ -1.79
Nubp1Q9R060 Gm24503-201ENSMUST00000158454 135 ntBASIC3.87□□□□□ -1.79
Nubp1Q9R060 Gm24842-201ENSMUST00000158681 54 ntBASIC3.87□□□□□ -1.79
Nubp1Q9R060 Mir129b-201ENSMUST00000197461 65 ntBASIC3.87□□□□□ -1.79
Nubp1Q9R060 Mir19b-2-201ENSMUST00000083539 84 ntBASIC3.87□□□□□ -1.79
Nubp1Q9R060 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Nubp1Q9R060 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
Nubp1Q9R060 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
Nubp1Q9R060 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
Nubp1Q9R060 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Nubp1Q9R060 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Nubp1Q9R060 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
Nubp1Q9R060 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
Nubp1Q9R060 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC3.86□□□□□ -1.79
Nubp1Q9R060 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC3.86□□□□□ -1.79
Nubp1Q9R060 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Nubp1Q9R060 Gm37899-201ENSMUST00000193116 8717 ntBASIC3.86□□□□□ -1.79
Nubp1Q9R060 Gm24281-201ENSMUST00000104234 136 ntBASIC3.86□□□□□ -1.79
Nubp1Q9R060 Gm24998-201ENSMUST00000157908 89 ntBASIC3.86□□□□□ -1.79
Nubp1Q9R060 Gm20438-201ENSMUST00000174441 329 ntBASIC3.86□□□□□ -1.79
Nubp1Q9R060 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Nubp1Q9R060 Gm4248-201ENSMUST00000196905 316 ntBASIC3.86□□□□□ -1.79
Nubp1Q9R060 Gm44824-201ENSMUST00000207021 229 ntBASIC3.86□□□□□ -1.79
Nubp1Q9R060 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.86□□□□□ -1.79
Nubp1Q9R060 AC147101.2-201ENSMUST00000219756 184 ntBASIC3.86□□□□□ -1.79
Nubp1Q9R060 Gm3338-201ENSMUST00000220982 269 ntBASIC3.86□□□□□ -1.79
Nubp1Q9R060 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.86□□□□□ -1.79
Nubp1Q9R060 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Nubp1Q9R060 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Nubp1Q9R060 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Nubp1Q9R060 Gm37625-201ENSMUST00000194969 4872 ntBASIC3.86□□□□□ -1.79
Nubp1Q9R060 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Nubp1Q9R060 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Nubp1Q9R060 Mir374b-201ENSMUST00000102314 95 ntBASIC3.85□□□□□ -1.79
Nubp1Q9R060 Gm14299-201ENSMUST00000117586 397 ntBASIC3.85□□□□□ -1.79
Nubp1Q9R060 Gm12513-201ENSMUST00000118617 352 ntBASIC3.85□□□□□ -1.79
Nubp1Q9R060 Gm22490-201ENSMUST00000157188 119 ntBASIC3.85□□□□□ -1.79
Nubp1Q9R060 Gm25572-201ENSMUST00000157527 172 ntBASIC3.85□□□□□ -1.79
Nubp1Q9R060 Gm25888-201ENSMUST00000157778 302 ntBASIC3.85□□□□□ -1.79
Nubp1Q9R060 Gm17131-201ENSMUST00000164420 3846 ntBASIC3.85□□□□□ -1.79
Nubp1Q9R060 Gm24813-201ENSMUST00000175310 84 ntBASIC3.85□□□□□ -1.79
Nubp1Q9R060 Mir7062-201ENSMUST00000185038 66 ntBASIC3.85□□□□□ -1.79
Nubp1Q9R060 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.85□□□□□ -1.79
Nubp1Q9R060 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC3.85□□□□□ -1.79
Nubp1Q9R060 Gm44057-201ENSMUST00000204547 96 ntBASIC3.85□□□□□ -1.79
Nubp1Q9R060 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC3.85□□□□□ -1.79
Nubp1Q9R060 Gm44703-201ENSMUST00000205724 248 ntBASIC3.85□□□□□ -1.79
Nubp1Q9R060 Gm45392-201ENSMUST00000210441 214 ntBASIC3.85□□□□□ -1.79
Nubp1Q9R060 Gm45456-201ENSMUST00000210841 243 ntBASIC3.85□□□□□ -1.79
Nubp1Q9R060 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.85□□□□□ -1.79
Nubp1Q9R060 Gm22055-201ENSMUST00000083388 107 ntBASIC3.85□□□□□ -1.79
Nubp1Q9R060 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Nubp1Q9R060 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Nubp1Q9R060 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Nubp1Q9R060 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Nubp1Q9R060 Gm45804-201ENSMUST00000212137 3435 ntBASIC3.84□□□□□ -1.79
Nubp1Q9R060 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Nubp1Q9R060 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Nubp1Q9R060 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Nubp1Q9R060 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
Nubp1Q9R060 Gm23271-201ENSMUST00000104052 124 ntBASIC3.84□□□□□ -1.79
Nubp1Q9R060 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
Nubp1Q9R060 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Nubp1Q9R060 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Nubp1Q9R060 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Nubp1Q9R060 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Nubp1Q9R060 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms