Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Gm13343-201ENSMUST00000116474 105 ntBASIC2.68□□□□□ -1.98
Shroom3Q9QXN0 Gm15714-201ENSMUST00000117168 250 ntBASIC2.68□□□□□ -1.98
Shroom3Q9QXN0 Gm22315-201ENSMUST00000158010 143 ntBASIC2.68□□□□□ -1.98
Shroom3Q9QXN0 Gm25162-201ENSMUST00000158906 159 ntBASIC2.68□□□□□ -1.98
Shroom3Q9QXN0 Gm25834-201ENSMUST00000158916 101 ntBASIC2.68□□□□□ -1.98
Shroom3Q9QXN0 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Shroom3Q9QXN0 Gm43402-201ENSMUST00000197159 159 ntBASIC2.68□□□□□ -1.98
Shroom3Q9QXN0 AC160984.2-201ENSMUST00000224927 791 ntBASIC2.68□□□□□ -1.98
Shroom3Q9QXN0 Gm24948-201ENSMUST00000082866 207 ntBASIC2.68□□□□□ -1.98
Shroom3Q9QXN0 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Shroom3Q9QXN0 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.68□□□□□ -1.98
Shroom3Q9QXN0 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.68□□□□□ -1.98
Shroom3Q9QXN0 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.67□□□□□ -1.98
Shroom3Q9QXN0 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Shroom3Q9QXN0 Gm25220-201ENSMUST00000157546 95 ntBASIC2.67□□□□□ -1.98
Shroom3Q9QXN0 Gm24552-201ENSMUST00000158646 103 ntBASIC2.67□□□□□ -1.98
Shroom3Q9QXN0 Gm27786-201ENSMUST00000184337 70 ntBASIC2.67□□□□□ -1.98
Shroom3Q9QXN0 Mir6540-201ENSMUST00000184886 108 ntBASIC2.67□□□□□ -1.98
Shroom3Q9QXN0 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC2.67□□□□□ -1.98
Shroom3Q9QXN0 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.67□□□□□ -1.98
Shroom3Q9QXN0 Gm37089-201ENSMUST00000195616 129 ntBASIC2.67□□□□□ -1.98
Shroom3Q9QXN0 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.67□□□□□ -1.98
Shroom3Q9QXN0 AC166830.2-201ENSMUST00000225821 196 ntBASIC2.67□□□□□ -1.98
Shroom3Q9QXN0 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Shroom3Q9QXN0 Gm10212-201ENSMUST00000087884 324 ntBASIC2.67□□□□□ -1.98
Shroom3Q9QXN0 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.67□□□□□ -1.98
Shroom3Q9QXN0 AC122850.1-201ENSMUST00000220380 5690 ntBASIC2.67□□□□□ -1.98
Shroom3Q9QXN0 Gm24586-201ENSMUST00000116695 89 ntBASIC2.67□□□□□ -1.98
Shroom3Q9QXN0 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC2.67□□□□□ -1.98
Shroom3Q9QXN0 Gm22215-201ENSMUST00000157558 96 ntBASIC2.67□□□□□ -1.98
Shroom3Q9QXN0 Gm24392-201ENSMUST00000158136 103 ntBASIC2.67□□□□□ -1.98
Shroom3Q9QXN0 Gm22113-201ENSMUST00000158343 104 ntBASIC2.67□□□□□ -1.98
Shroom3Q9QXN0 Gm24922-201ENSMUST00000158511 102 ntBASIC2.67□□□□□ -1.98
Shroom3Q9QXN0 Gm23196-201ENSMUST00000158806 107 ntBASIC2.67□□□□□ -1.98
Shroom3Q9QXN0 Gm24667-201ENSMUST00000158938 103 ntBASIC2.67□□□□□ -1.98
Shroom3Q9QXN0 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Shroom3Q9QXN0 Gm16326-201ENSMUST00000162843 414 ntBASIC2.67□□□□□ -1.98
Shroom3Q9QXN0 Snord93-201ENSMUST00000175580 71 ntBASIC2.67□□□□□ -1.98
Shroom3Q9QXN0 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.67□□□□□ -1.98
Shroom3Q9QXN0 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.67□□□□□ -1.98
Shroom3Q9QXN0 Gm5002-201ENSMUST00000207145 223 ntBASIC2.67□□□□□ -1.98
Shroom3Q9QXN0 Gm22294-201ENSMUST00000083308 104 ntBASIC2.67□□□□□ -1.98
Shroom3Q9QXN0 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Shroom3Q9QXN0 Gm10033-201ENSMUST00000072427 1813 ntBASIC2.67□□□□□ -1.98
Shroom3Q9QXN0 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC2.66□□□□□ -1.98
Shroom3Q9QXN0 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Shroom3Q9QXN0 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Shroom3Q9QXN0 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Shroom3Q9QXN0 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.66□□□□□ -1.98
Shroom3Q9QXN0 Gm25863-201ENSMUST00000158249 329 ntBASIC2.66□□□□□ -1.98
Shroom3Q9QXN0 Gm23209-201ENSMUST00000158667 110 ntBASIC2.66□□□□□ -1.98
Shroom3Q9QXN0 Gm5967-201ENSMUST00000172723 494 ntBASIC2.66□□□□□ -1.98
Shroom3Q9QXN0 Gm20718-201ENSMUST00000176058 259 ntBASIC2.66□□□□□ -1.98
Shroom3Q9QXN0 Gm22308-201ENSMUST00000177609 107 ntBASIC2.66□□□□□ -1.98
Shroom3Q9QXN0 Gm25615-201ENSMUST00000177836 94 ntBASIC2.66□□□□□ -1.98
Shroom3Q9QXN0 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC2.66□□□□□ -1.98
Shroom3Q9QXN0 Gm44903-201ENSMUST00000206840 130 ntBASIC2.66□□□□□ -1.98
Shroom3Q9QXN0 Gm18188-201ENSMUST00000219386 478 ntBASIC2.66□□□□□ -1.98
Shroom3Q9QXN0 Snord82-201ENSMUST00000082889 70 ntBASIC2.66□□□□□ -1.98
Shroom3Q9QXN0 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Shroom3Q9QXN0 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
Shroom3Q9QXN0 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Shroom3Q9QXN0 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.65□□□□□ -1.98
Shroom3Q9QXN0 Gm5937-201ENSMUST00000119715 643 ntBASIC2.65□□□□□ -1.98
Shroom3Q9QXN0 Gm24839-201ENSMUST00000122602 107 ntBASIC2.65□□□□□ -1.98
Shroom3Q9QXN0 Gm22416-201ENSMUST00000158590 88 ntBASIC2.65□□□□□ -1.98
Shroom3Q9QXN0 Gm25119-201ENSMUST00000158815 88 ntBASIC2.65□□□□□ -1.98
Shroom3Q9QXN0 Gm7258-201ENSMUST00000179317 300 ntBASIC2.65□□□□□ -1.98
Shroom3Q9QXN0 Gm19123-201ENSMUST00000190716 651 ntBASIC2.65□□□□□ -1.98
Shroom3Q9QXN0 Gm37807-201ENSMUST00000194310 190 ntBASIC2.65□□□□□ -1.98
Shroom3Q9QXN0 Gm37417-201ENSMUST00000195257 454 ntBASIC2.65□□□□□ -1.98
Shroom3Q9QXN0 Gm43193-201ENSMUST00000197732 441 ntBASIC2.65□□□□□ -1.98
Shroom3Q9QXN0 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC2.65□□□□□ -1.98
Shroom3Q9QXN0 Gm8274-201ENSMUST00000219820 463 ntBASIC2.65□□□□□ -1.98
Shroom3Q9QXN0 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.65□□□□□ -1.98
Shroom3Q9QXN0 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
Shroom3Q9QXN0 Mir32-201ENSMUST00000083610 70 ntBASIC2.65□□□□□ -1.98
Shroom3Q9QXN0 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Shroom3Q9QXN0 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Shroom3Q9QXN0 Gm22321-201ENSMUST00000157152 104 ntBASIC2.65□□□□□ -1.99
Shroom3Q9QXN0 Gm24676-201ENSMUST00000158758 75 ntBASIC2.65□□□□□ -1.99
Shroom3Q9QXN0 Gm22118-201ENSMUST00000175593 171 ntBASIC2.65□□□□□ -1.99
Shroom3Q9QXN0 Gm27465-201ENSMUST00000184290 91 ntBASIC2.65□□□□□ -1.99
Shroom3Q9QXN0 Gm43704-201ENSMUST00000196164 496 ntBASIC2.65□□□□□ -1.99
Shroom3Q9QXN0 Gm42623-201ENSMUST00000197225 379 ntBASIC2.65□□□□□ -1.99
Shroom3Q9QXN0 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.65□□□□□ -1.99
Shroom3Q9QXN0 AC115735.2-201ENSMUST00000227135 351 ntBASIC2.65□□□□□ -1.99
Shroom3Q9QXN0 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Shroom3Q9QXN0 Gm9818-201ENSMUST00000050900 255 ntBASIC2.65□□□□□ -1.99
Shroom3Q9QXN0 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Shroom3Q9QXN0 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Shroom3Q9QXN0 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
Shroom3Q9QXN0 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Shroom3Q9QXN0 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Shroom3Q9QXN0 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Shroom3Q9QXN0 Gm13273-201ENSMUST00000119737 159 ntBASIC2.64□□□□□ -1.99
Shroom3Q9QXN0 Gm22447-201ENSMUST00000158155 92 ntBASIC2.64□□□□□ -1.99
Shroom3Q9QXN0 Gm25716-201ENSMUST00000158628 104 ntBASIC2.64□□□□□ -1.99
Shroom3Q9QXN0 Gm24308-201ENSMUST00000177773 114 ntBASIC2.64□□□□□ -1.99
Shroom3Q9QXN0 Gm27379-201ENSMUST00000183730 123 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms