Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Cpsf3Q9QXK7 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.27□□□□□ -2.05
Cpsf3Q9QXK7 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Cpsf3Q9QXK7 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.26□□□□□ -2.05
Cpsf3Q9QXK7 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Cpsf3Q9QXK7 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Cpsf3Q9QXK7 Gm24282-201ENSMUST00000104232 66 ntBASIC2.26□□□□□ -2.05
Cpsf3Q9QXK7 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Cpsf3Q9QXK7 Gm12646-201ENSMUST00000119144 238 ntBASIC2.26□□□□□ -2.05
Cpsf3Q9QXK7 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Cpsf3Q9QXK7 Gm6956-201ENSMUST00000134724 546 ntBASIC2.26□□□□□ -2.05
Cpsf3Q9QXK7 Gm25625-201ENSMUST00000157221 96 ntBASIC2.26□□□□□ -2.05
Cpsf3Q9QXK7 Gm25457-201ENSMUST00000179509 107 ntBASIC2.26□□□□□ -2.05
Cpsf3Q9QXK7 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Cpsf3Q9QXK7 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Cpsf3Q9QXK7 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.26□□□□□ -2.05
Cpsf3Q9QXK7 Gm25896-201ENSMUST00000083713 136 ntBASIC2.26□□□□□ -2.05
Cpsf3Q9QXK7 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Cpsf3Q9QXK7 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
Cpsf3Q9QXK7 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Cpsf3Q9QXK7 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.25□□□□□ -2.05
Cpsf3Q9QXK7 Gm13672-201ENSMUST00000117554 459 ntBASIC2.25□□□□□ -2.05
Cpsf3Q9QXK7 Gm13396-201ENSMUST00000120617 271 ntBASIC2.25□□□□□ -2.05
Cpsf3Q9QXK7 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.25□□□□□ -2.05
Cpsf3Q9QXK7 Gm24504-201ENSMUST00000157679 100 ntBASIC2.25□□□□□ -2.05
Cpsf3Q9QXK7 Gm25982-201ENSMUST00000157920 101 ntBASIC2.25□□□□□ -2.05
Cpsf3Q9QXK7 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC2.25□□□□□ -2.05
Cpsf3Q9QXK7 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
Cpsf3Q9QXK7 Gm24388-201ENSMUST00000177872 107 ntBASIC2.25□□□□□ -2.05
Cpsf3Q9QXK7 Mir6355-201ENSMUST00000183687 106 ntBASIC2.25□□□□□ -2.05
Cpsf3Q9QXK7 Gm29229-201ENSMUST00000188874 323 ntBASIC2.25□□□□□ -2.05
Cpsf3Q9QXK7 Mir7232-201ENSMUST00000197929 74 ntBASIC2.25□□□□□ -2.05
Cpsf3Q9QXK7 Gm44182-201ENSMUST00000204052 115 ntBASIC2.25□□□□□ -2.05
Cpsf3Q9QXK7 Gm44811-201ENSMUST00000209120 228 ntBASIC2.25□□□□□ -2.05
Cpsf3Q9QXK7 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC2.25□□□□□ -2.05
Cpsf3Q9QXK7 AC125311.1-201ENSMUST00000226950 220 ntBASIC2.25□□□□□ -2.05
Cpsf3Q9QXK7 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
Cpsf3Q9QXK7 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Cpsf3Q9QXK7 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC2.24□□□□□ -2.05
Cpsf3Q9QXK7 Gm14972-201ENSMUST00000121780 364 ntBASIC2.24□□□□□ -2.05
Cpsf3Q9QXK7 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC2.24□□□□□ -2.05
Cpsf3Q9QXK7 Gm21978-201ENSMUST00000179696 377 ntBASIC2.24□□□□□ -2.05
Cpsf3Q9QXK7 Gm27410-201ENSMUST00000183851 115 ntBASIC2.24□□□□□ -2.05
Cpsf3Q9QXK7 Mir6376-201ENSMUST00000185149 131 ntBASIC2.24□□□□□ -2.05
Cpsf3Q9QXK7 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.24□□□□□ -2.05
Cpsf3Q9QXK7 Gm18991-201ENSMUST00000209225 746 ntBASIC2.24□□□□□ -2.05
Cpsf3Q9QXK7 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.24□□□□□ -2.05
Cpsf3Q9QXK7 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.24□□□□□ -2.05
Cpsf3Q9QXK7 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.24□□□□□ -2.05
Cpsf3Q9QXK7 Gm25796-201ENSMUST00000082645 163 ntBASIC2.24□□□□□ -2.05
Cpsf3Q9QXK7 Gm23721-201ENSMUST00000083005 107 ntBASIC2.24□□□□□ -2.05
Cpsf3Q9QXK7 Gm26265-201ENSMUST00000083277 135 ntBASIC2.24□□□□□ -2.05
Cpsf3Q9QXK7 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.24□□□□□ -2.05
Cpsf3Q9QXK7 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Cpsf3Q9QXK7 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Cpsf3Q9QXK7 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Cpsf3Q9QXK7 Gm24098-201ENSMUST00000102075 109 ntBASIC2.23□□□□□ -2.05
Cpsf3Q9QXK7 Gm25381-201ENSMUST00000102078 109 ntBASIC2.23□□□□□ -2.05
Cpsf3Q9QXK7 Gm15010-201ENSMUST00000117153 407 ntBASIC2.23□□□□□ -2.05
Cpsf3Q9QXK7 Gm11798-201ENSMUST00000119150 421 ntBASIC2.23□□□□□ -2.05
Cpsf3Q9QXK7 Gm24005-201ENSMUST00000158459 296 ntBASIC2.23□□□□□ -2.05
Cpsf3Q9QXK7 Gm25488-201ENSMUST00000158728 118 ntBASIC2.23□□□□□ -2.05
Cpsf3Q9QXK7 Mir6346-201ENSMUST00000183982 81 ntBASIC2.23□□□□□ -2.05
Cpsf3Q9QXK7 Gm29397-201ENSMUST00000185205 333 ntBASIC2.23□□□□□ -2.05
Cpsf3Q9QXK7 Gm44337-201ENSMUST00000196553 114 ntBASIC2.23□□□□□ -2.05
Cpsf3Q9QXK7 Gm43505-201ENSMUST00000200579 139 ntBASIC2.23□□□□□ -2.05
Cpsf3Q9QXK7 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC2.23□□□□□ -2.05
Cpsf3Q9QXK7 AC133156.1-202ENSMUST00000227284 363 ntBASIC2.23□□□□□ -2.05
Cpsf3Q9QXK7 Gm25929-201ENSMUST00000082784 107 ntBASIC2.23□□□□□ -2.05
Cpsf3Q9QXK7 Gm26314-201ENSMUST00000083891 107 ntBASIC2.23□□□□□ -2.05
Cpsf3Q9QXK7 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
Cpsf3Q9QXK7 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.22□□□□□ -2.05
Cpsf3Q9QXK7 Gm18360-201ENSMUST00000173327 1524 ntBASIC2.22□□□□□ -2.05
Cpsf3Q9QXK7 Gm42755-201ENSMUST00000198533 1493 ntBASIC2.22□□□□□ -2.05
Cpsf3Q9QXK7 Gm22032-201ENSMUST00000116946 116 ntBASIC2.22□□□□□ -2.05
Cpsf3Q9QXK7 Gm12721-201ENSMUST00000120621 268 ntBASIC2.22□□□□□ -2.05
Cpsf3Q9QXK7 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC2.22□□□□□ -2.05
Cpsf3Q9QXK7 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC2.22□□□□□ -2.05
Cpsf3Q9QXK7 Gm22836-201ENSMUST00000158441 61 ntBASIC2.22□□□□□ -2.05
Cpsf3Q9QXK7 Gm25711-201ENSMUST00000158633 128 ntBASIC2.22□□□□□ -2.05
Cpsf3Q9QXK7 Gm22666-201ENSMUST00000158717 164 ntBASIC2.22□□□□□ -2.05
Cpsf3Q9QXK7 Mir6399-201ENSMUST00000184050 84 ntBASIC2.22□□□□□ -2.05
Cpsf3Q9QXK7 Gm27443-201ENSMUST00000184660 98 ntBASIC2.22□□□□□ -2.05
Cpsf3Q9QXK7 Gm27991-201ENSMUST00000184804 137 ntBASIC2.22□□□□□ -2.05
Cpsf3Q9QXK7 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Cpsf3Q9QXK7 Gm43578-201ENSMUST00000201250 459 ntBASIC2.22□□□□□ -2.05
Cpsf3Q9QXK7 AC102369.1-201ENSMUST00000218415 373 ntBASIC2.22□□□□□ -2.05
Cpsf3Q9QXK7 AC192333.1-201ENSMUST00000224573 376 ntBASIC2.22□□□□□ -2.05
Cpsf3Q9QXK7 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.22□□□□□ -2.05
Cpsf3Q9QXK7 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
Cpsf3Q9QXK7 Gm22978-201ENSMUST00000082607 160 ntBASIC2.22□□□□□ -2.05
Cpsf3Q9QXK7 Gm24044-201ENSMUST00000083107 156 ntBASIC2.22□□□□□ -2.05
Cpsf3Q9QXK7 Mir222-201ENSMUST00000083537 79 ntBASIC2.22□□□□□ -2.05
Cpsf3Q9QXK7 Snora69-201ENSMUST00000083708 131 ntBASIC2.22□□□□□ -2.05
Cpsf3Q9QXK7 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Cpsf3Q9QXK7 Gm22678-201ENSMUST00000116974 101 ntBASIC2.21□□□□□ -2.06
Cpsf3Q9QXK7 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.21□□□□□ -2.06
Cpsf3Q9QXK7 Gm14215-201ENSMUST00000120578 221 ntBASIC2.21□□□□□ -2.06
Cpsf3Q9QXK7 Gm25961-201ENSMUST00000157174 135 ntBASIC2.21□□□□□ -2.06
Cpsf3Q9QXK7 Gm26345-201ENSMUST00000157534 120 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 205.5 ms