Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Gm43245-201ENSMUST00000197603 468 ntBASIC0.63□□□□□ -2.31
Trem3Q9JKE1 Gm44910-201ENSMUST00000208451 396 ntBASIC0.63□□□□□ -2.31
Trem3Q9JKE1 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC0.63□□□□□ -2.31
Trem3Q9JKE1 Mir340-201ENSMUST00000083483 98 ntBASIC0.63□□□□□ -2.31
Trem3Q9JKE1 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
Trem3Q9JKE1 Gm25938-201ENSMUST00000104139 166 ntBASIC0.62□□□□□ -2.31
Trem3Q9JKE1 Gm24481-201ENSMUST00000157210 102 ntBASIC0.62□□□□□ -2.31
Trem3Q9JKE1 Gm20630-201ENSMUST00000177387 551 ntBASIC0.62□□□□□ -2.31
Trem3Q9JKE1 Gm22633-201ENSMUST00000179834 107 ntBASIC0.62□□□□□ -2.31
Trem3Q9JKE1 Gm9251-201ENSMUST00000197202 628 ntBASIC0.62□□□□□ -2.31
Trem3Q9JKE1 Gm45590-201ENSMUST00000209715 262 ntBASIC0.62□□□□□ -2.31
Trem3Q9JKE1 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
Trem3Q9JKE1 Gm25357-201ENSMUST00000082745 72 ntBASIC0.62□□□□□ -2.31
Trem3Q9JKE1 Gm22972-201ENSMUST00000083297 131 ntBASIC0.62□□□□□ -2.31
Trem3Q9JKE1 Mir27b-201ENSMUST00000083541 73 ntBASIC0.62□□□□□ -2.31
Trem3Q9JKE1 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
Trem3Q9JKE1 Gm43706-201ENSMUST00000198767 2652 ntBASIC0.61□□□□□ -2.31
Trem3Q9JKE1 Gm26002-201ENSMUST00000101915 107 ntBASIC0.61□□□□□ -2.31
Trem3Q9JKE1 Mir374b-201ENSMUST00000102314 95 ntBASIC0.61□□□□□ -2.31
Trem3Q9JKE1 Gm23015-201ENSMUST00000104145 128 ntBASIC0.61□□□□□ -2.31
Trem3Q9JKE1 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC0.61□□□□□ -2.31
Trem3Q9JKE1 Gm23120-201ENSMUST00000157654 287 ntBASIC0.61□□□□□ -2.31
Trem3Q9JKE1 Gm22551-201ENSMUST00000157795 103 ntBASIC0.61□□□□□ -2.31
Trem3Q9JKE1 Gm22186-201ENSMUST00000157822 122 ntBASIC0.61□□□□□ -2.31
Trem3Q9JKE1 Gm25162-201ENSMUST00000158906 159 ntBASIC0.61□□□□□ -2.31
Trem3Q9JKE1 Gm3221-201ENSMUST00000164869 440 ntBASIC0.61□□□□□ -2.31
Trem3Q9JKE1 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC0.61□□□□□ -2.31
Trem3Q9JKE1 Gm22584-201ENSMUST00000177935 92 ntBASIC0.61□□□□□ -2.31
Trem3Q9JKE1 Gm24390-201ENSMUST00000179578 62 ntBASIC0.61□□□□□ -2.31
Trem3Q9JKE1 Gm23862-201ENSMUST00000180342 94 ntBASIC0.61□□□□□ -2.31
Trem3Q9JKE1 Gm28560-201ENSMUST00000186091 315 ntBASIC0.61□□□□□ -2.31
Trem3Q9JKE1 Gm28334-201ENSMUST00000186653 315 ntBASIC0.61□□□□□ -2.31
Trem3Q9JKE1 Gm28495-201ENSMUST00000188452 315 ntBASIC0.61□□□□□ -2.31
Trem3Q9JKE1 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
Trem3Q9JKE1 Gm28232-201ENSMUST00000188683 315 ntBASIC0.61□□□□□ -2.31
Trem3Q9JKE1 Gm28481-201ENSMUST00000189231 315 ntBASIC0.61□□□□□ -2.31
Trem3Q9JKE1 Gm29059-201ENSMUST00000191534 315 ntBASIC0.61□□□□□ -2.31
Trem3Q9JKE1 Gm37765-201ENSMUST00000192395 315 ntBASIC0.61□□□□□ -2.31
Trem3Q9JKE1 Gm37237-201ENSMUST00000192893 315 ntBASIC0.61□□□□□ -2.31
Trem3Q9JKE1 Gm36968-201ENSMUST00000193737 315 ntBASIC0.61□□□□□ -2.31
Trem3Q9JKE1 Gm38290-201ENSMUST00000195238 315 ntBASIC0.61□□□□□ -2.31
Trem3Q9JKE1 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
Trem3Q9JKE1 AC168056.1-201ENSMUST00000225270 180 ntBASIC0.61□□□□□ -2.31
Trem3Q9JKE1 AC163646.2-201ENSMUST00000227962 141 ntBASIC0.61□□□□□ -2.31
Trem3Q9JKE1 AC124426.1-203ENSMUST00000221814 1362 ntBASIC0.6□□□□□ -2.31
Trem3Q9JKE1 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
Trem3Q9JKE1 Gm12106-201ENSMUST00000116006 1200 ntBASIC0.6□□□□□ -2.31
Trem3Q9JKE1 Gm14355-201ENSMUST00000117352 264 ntBASIC0.6□□□□□ -2.31
Trem3Q9JKE1 Gm14362-201ENSMUST00000121679 273 ntBASIC0.6□□□□□ -2.31
Trem3Q9JKE1 Gm14364-201ENSMUST00000129209 267 ntBASIC0.6□□□□□ -2.31
Trem3Q9JKE1 Gm15254-201ENSMUST00000149567 273 ntBASIC0.6□□□□□ -2.31
Trem3Q9JKE1 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC0.6□□□□□ -2.31
Trem3Q9JKE1 Gm17052-201ENSMUST00000165496 289 ntBASIC0.6□□□□□ -2.31
Trem3Q9JKE1 Gm25956-201ENSMUST00000175115 217 ntBASIC0.6□□□□□ -2.31
Trem3Q9JKE1 Gm22929-201ENSMUST00000175517 107 ntBASIC0.6□□□□□ -2.31
Trem3Q9JKE1 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC0.6□□□□□ -2.31
Trem3Q9JKE1 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
Trem3Q9JKE1 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
Trem3Q9JKE1 Mir7665-201ENSMUST00000184907 63 ntBASIC0.6□□□□□ -2.31
Trem3Q9JKE1 Gm29005-201ENSMUST00000186773 320 ntBASIC0.6□□□□□ -2.31
Trem3Q9JKE1 Gm44320-201ENSMUST00000199276 86 ntBASIC0.6□□□□□ -2.31
Trem3Q9JKE1 Gm44429-201ENSMUST00000203542 186 ntBASIC0.6□□□□□ -2.31
Trem3Q9JKE1 Gm35736-201ENSMUST00000203681 313 ntBASIC0.6□□□□□ -2.31
Trem3Q9JKE1 AC162931.1-201ENSMUST00000214184 267 ntBASIC0.6□□□□□ -2.31
Trem3Q9JKE1 Gm23735-201ENSMUST00000082551 134 ntBASIC0.6□□□□□ -2.31
Trem3Q9JKE1 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
Trem3Q9JKE1 Gm14765-201ENSMUST00000121954 326 ntBASIC0.59□□□□□ -2.31
Trem3Q9JKE1 Gm25269-201ENSMUST00000122601 104 ntBASIC0.59□□□□□ -2.31
Trem3Q9JKE1 Gm7925-201ENSMUST00000166690 401 ntBASIC0.59□□□□□ -2.31
Trem3Q9JKE1 Gm17054-201ENSMUST00000169811 259 ntBASIC0.59□□□□□ -2.31
Trem3Q9JKE1 Gm2878-201ENSMUST00000170173 486 ntBASIC0.59□□□□□ -2.31
Trem3Q9JKE1 Gm23419-201ENSMUST00000175523 84 ntBASIC0.59□□□□□ -2.31
Trem3Q9JKE1 Gm21815-201ENSMUST00000178213 664 ntBASIC0.59□□□□□ -2.31
Trem3Q9JKE1 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC0.59□□□□□ -2.31
Trem3Q9JKE1 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC0.59□□□□□ -2.31
Trem3Q9JKE1 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC0.59□□□□□ -2.31
Trem3Q9JKE1 Gm18696-201ENSMUST00000220103 274 ntBASIC0.59□□□□□ -2.31
Trem3Q9JKE1 AC156560.1-201ENSMUST00000221425 256 ntBASIC0.59□□□□□ -2.31
Trem3Q9JKE1 Gm24045-201ENSMUST00000083113 98 ntBASIC0.59□□□□□ -2.31
Trem3Q9JKE1 Gm22577-201ENSMUST00000083731 109 ntBASIC0.59□□□□□ -2.31
Trem3Q9JKE1 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
Trem3Q9JKE1 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC0.59□□□□□ -2.32
Trem3Q9JKE1 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.32
Trem3Q9JKE1 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC0.58□□□□□ -2.32
Trem3Q9JKE1 Gm22193-201ENSMUST00000116868 76 ntBASIC0.58□□□□□ -2.32
Trem3Q9JKE1 Gm15659-201ENSMUST00000118881 341 ntBASIC0.58□□□□□ -2.32
Trem3Q9JKE1 Gm25544-201ENSMUST00000122676 120 ntBASIC0.58□□□□□ -2.32
Trem3Q9JKE1 Gm25663-201ENSMUST00000157698 135 ntBASIC0.58□□□□□ -2.32
Trem3Q9JKE1 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC0.58□□□□□ -2.32
Trem3Q9JKE1 Gm22263-201ENSMUST00000180060 104 ntBASIC0.58□□□□□ -2.32
Trem3Q9JKE1 Gm26652-202ENSMUST00000181672 475 ntBASIC0.58□□□□□ -2.32
Trem3Q9JKE1 Gm27974-201ENSMUST00000183415 105 ntBASIC0.58□□□□□ -2.32
Trem3Q9JKE1 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
Trem3Q9JKE1 Mir3087-201ENSMUST00000199405 56 ntBASIC0.58□□□□□ -2.32
Trem3Q9JKE1 Gm44254-201ENSMUST00000204184 322 ntBASIC0.58□□□□□ -2.32
Trem3Q9JKE1 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC0.58□□□□□ -2.32
Trem3Q9JKE1 Gm7495-201ENSMUST00000215099 426 ntBASIC0.58□□□□□ -2.32
Trem3Q9JKE1 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC0.58□□□□□ -2.32
Trem3Q9JKE1 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC0.58□□□□□ -2.32
Trem3Q9JKE1 AC133156.1-202ENSMUST00000227284 363 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms