Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
Copb1Q9JIF7 Mir133a-1-201ENSMUST00000083465 68 ntBASIC2.83□□□□□ -1.96
Copb1Q9JIF7 Mir103-2-201ENSMUST00000083629 86 ntBASIC2.83□□□□□ -1.96
Copb1Q9JIF7 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Copb1Q9JIF7 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.82□□□□□ -1.96
Copb1Q9JIF7 Gm13714-201ENSMUST00000117313 221 ntBASIC2.82□□□□□ -1.96
Copb1Q9JIF7 Gm15282-201ENSMUST00000117707 300 ntBASIC2.82□□□□□ -1.96
Copb1Q9JIF7 Gm14020-201ENSMUST00000118165 662 ntBASIC2.82□□□□□ -1.96
Copb1Q9JIF7 Gm12646-201ENSMUST00000119144 238 ntBASIC2.82□□□□□ -1.96
Copb1Q9JIF7 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC2.82□□□□□ -1.96
Copb1Q9JIF7 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.82□□□□□ -1.96
Copb1Q9JIF7 Gm26406-201ENSMUST00000158503 124 ntBASIC2.82□□□□□ -1.96
Copb1Q9JIF7 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.82□□□□□ -1.96
Copb1Q9JIF7 Gm29140-201ENSMUST00000190187 476 ntBASIC2.82□□□□□ -1.96
Copb1Q9JIF7 Gm38060-201ENSMUST00000194822 464 ntBASIC2.82□□□□□ -1.96
Copb1Q9JIF7 Gm18341-201ENSMUST00000197538 622 ntBASIC2.82□□□□□ -1.96
Copb1Q9JIF7 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC2.82□□□□□ -1.96
Copb1Q9JIF7 Gm25078-201ENSMUST00000082530 107 ntBASIC2.82□□□□□ -1.96
Copb1Q9JIF7 Mir32-201ENSMUST00000083610 70 ntBASIC2.82□□□□□ -1.96
Copb1Q9JIF7 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Copb1Q9JIF7 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Copb1Q9JIF7 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC2.82□□□□□ -1.96
Copb1Q9JIF7 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Copb1Q9JIF7 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.81□□□□□ -1.96
Copb1Q9JIF7 Gm14894-201ENSMUST00000117170 270 ntBASIC2.81□□□□□ -1.96
Copb1Q9JIF7 Gm13729-201ENSMUST00000120328 406 ntBASIC2.81□□□□□ -1.96
Copb1Q9JIF7 Gm14402-201ENSMUST00000122217 508 ntBASIC2.81□□□□□ -1.96
Copb1Q9JIF7 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.81□□□□□ -1.96
Copb1Q9JIF7 Gm23559-201ENSMUST00000157824 103 ntBASIC2.81□□□□□ -1.96
Copb1Q9JIF7 Gm27579-201ENSMUST00000158113 63 ntBASIC2.81□□□□□ -1.96
Copb1Q9JIF7 Gm22447-201ENSMUST00000158155 92 ntBASIC2.81□□□□□ -1.96
Copb1Q9JIF7 Gm20718-201ENSMUST00000176058 259 ntBASIC2.81□□□□□ -1.96
Copb1Q9JIF7 Gm27698-201ENSMUST00000184060 249 ntBASIC2.81□□□□□ -1.96
Copb1Q9JIF7 Gm37449-201ENSMUST00000193016 270 ntBASIC2.81□□□□□ -1.96
Copb1Q9JIF7 Gm18658-201ENSMUST00000195558 270 ntBASIC2.81□□□□□ -1.96
Copb1Q9JIF7 Gm42570-201ENSMUST00000195937 292 ntBASIC2.81□□□□□ -1.96
Copb1Q9JIF7 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.81□□□□□ -1.96
Copb1Q9JIF7 Gm43978-201ENSMUST00000203491 451 ntBASIC2.81□□□□□ -1.96
Copb1Q9JIF7 Gm40810-201ENSMUST00000219149 253 ntBASIC2.81□□□□□ -1.96
Copb1Q9JIF7 AC155712.1-201ENSMUST00000219704 160 ntBASIC2.81□□□□□ -1.96
Copb1Q9JIF7 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.81□□□□□ -1.96
Copb1Q9JIF7 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.81□□□□□ -1.96
Copb1Q9JIF7 Gm10298-201ENSMUST00000074801 265 ntBASIC2.81□□□□□ -1.96
Copb1Q9JIF7 Gm22062-201ENSMUST00000082563 107 ntBASIC2.81□□□□□ -1.96
Copb1Q9JIF7 Gm25410-201ENSMUST00000083758 137 ntBASIC2.81□□□□□ -1.96
Copb1Q9JIF7 Gm26327-201ENSMUST00000093724 111 ntBASIC2.81□□□□□ -1.96
Copb1Q9JIF7 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Copb1Q9JIF7 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Copb1Q9JIF7 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
Copb1Q9JIF7 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Copb1Q9JIF7 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Copb1Q9JIF7 Gm10033-201ENSMUST00000072427 1813 ntBASIC2.8□□□□□ -1.96
Copb1Q9JIF7 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
Copb1Q9JIF7 Gm25565-201ENSMUST00000104605 105 ntBASIC2.8□□□□□ -1.96
Copb1Q9JIF7 Gm25316-201ENSMUST00000116826 118 ntBASIC2.8□□□□□ -1.96
Copb1Q9JIF7 Gm14774-201ENSMUST00000117857 536 ntBASIC2.8□□□□□ -1.96
Copb1Q9JIF7 Gm15002-201ENSMUST00000118406 452 ntBASIC2.8□□□□□ -1.96
Copb1Q9JIF7 Gm26256-201ENSMUST00000122499 186 ntBASIC2.8□□□□□ -1.96
Copb1Q9JIF7 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC2.8□□□□□ -1.96
Copb1Q9JIF7 Gm24729-201ENSMUST00000158225 137 ntBASIC2.8□□□□□ -1.96
Copb1Q9JIF7 Gm24726-201ENSMUST00000158232 121 ntBASIC2.8□□□□□ -1.96
Copb1Q9JIF7 Gm8292-201ENSMUST00000162574 396 ntBASIC2.8□□□□□ -1.96
Copb1Q9JIF7 Mir3103-201ENSMUST00000175474 67 ntBASIC2.8□□□□□ -1.96
Copb1Q9JIF7 Snora15-201ENSMUST00000177461 131 ntBASIC2.8□□□□□ -1.96
Copb1Q9JIF7 Gm25528-201ENSMUST00000180264 132 ntBASIC2.8□□□□□ -1.96
Copb1Q9JIF7 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.8□□□□□ -1.96
Copb1Q9JIF7 Mir3535-201ENSMUST00000197651 147 ntBASIC2.8□□□□□ -1.96
Copb1Q9JIF7 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Copb1Q9JIF7 Gm44524-201ENSMUST00000203899 271 ntBASIC2.8□□□□□ -1.96
Copb1Q9JIF7 AC125374.2-201ENSMUST00000214278 162 ntBASIC2.8□□□□□ -1.96
Copb1Q9JIF7 AC165157.3-201ENSMUST00000220815 103 ntBASIC2.8□□□□□ -1.96
Copb1Q9JIF7 AC165284.1-201ENSMUST00000228614 458 ntBASIC2.8□□□□□ -1.96
Copb1Q9JIF7 mt-Ti-201ENSMUST00000082393 69 ntBASIC2.8□□□□□ -1.96
Copb1Q9JIF7 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Copb1Q9JIF7 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.8□□□□□ -1.96
Copb1Q9JIF7 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.8□□□□□ -1.96
Copb1Q9JIF7 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Copb1Q9JIF7 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC2.8□□□□□ -1.96
Copb1Q9JIF7 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Copb1Q9JIF7 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.8□□□□□ -1.96
Copb1Q9JIF7 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Copb1Q9JIF7 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Copb1Q9JIF7 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Copb1Q9JIF7 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Copb1Q9JIF7 Mir465b-1-201ENSMUST00000103940 79 ntBASIC2.79□□□□□ -1.96
Copb1Q9JIF7 Gm23128-201ENSMUST00000104257 132 ntBASIC2.79□□□□□ -1.96
Copb1Q9JIF7 Mir465b-2-201ENSMUST00000104662 79 ntBASIC2.79□□□□□ -1.96
Copb1Q9JIF7 Gm12934-201ENSMUST00000119221 343 ntBASIC2.79□□□□□ -1.96
Copb1Q9JIF7 Gm25270-201ENSMUST00000122606 138 ntBASIC2.79□□□□□ -1.96
Copb1Q9JIF7 Gm23331-201ENSMUST00000157423 108 ntBASIC2.79□□□□□ -1.96
Copb1Q9JIF7 Gm24308-201ENSMUST00000177773 114 ntBASIC2.79□□□□□ -1.96
Copb1Q9JIF7 Mir6370-201ENSMUST00000183510 120 ntBASIC2.79□□□□□ -1.96
Copb1Q9JIF7 Gm27379-201ENSMUST00000183730 123 ntBASIC2.79□□□□□ -1.96
Copb1Q9JIF7 Gm23128-202ENSMUST00000196578 133 ntBASIC2.79□□□□□ -1.96
Copb1Q9JIF7 Gm43680-201ENSMUST00000199466 340 ntBASIC2.79□□□□□ -1.96
Copb1Q9JIF7 Gm34314-201ENSMUST00000203622 367 ntBASIC2.79□□□□□ -1.96
Copb1Q9JIF7 Gm45879-201ENSMUST00000212521 392 ntBASIC2.79□□□□□ -1.96
Copb1Q9JIF7 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.79□□□□□ -1.96
Copb1Q9JIF7 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC2.79□□□□□ -1.96
Copb1Q9JIF7 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 112.6 ms