Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm45013-201ENSMUST00000206883 178 ntBASIC2.73□□□□□ -1.97
Trim54Q9ERP3 Gm44960-201ENSMUST00000207403 141 ntBASIC2.73□□□□□ -1.97
Trim54Q9ERP3 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.73□□□□□ -1.97
Trim54Q9ERP3 Gm24460-201ENSMUST00000082731 106 ntBASIC2.73□□□□□ -1.97
Trim54Q9ERP3 Gm23040-201ENSMUST00000083869 163 ntBASIC2.73□□□□□ -1.97
Trim54Q9ERP3 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
Trim54Q9ERP3 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Trim54Q9ERP3 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.72□□□□□ -1.97
Trim54Q9ERP3 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Trim54Q9ERP3 Gm11285-201ENSMUST00000118443 322 ntBASIC2.72□□□□□ -1.97
Trim54Q9ERP3 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.72□□□□□ -1.97
Trim54Q9ERP3 Gm23589-201ENSMUST00000157660 105 ntBASIC2.72□□□□□ -1.97
Trim54Q9ERP3 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.72□□□□□ -1.97
Trim54Q9ERP3 Gm22192-201ENSMUST00000175128 85 ntBASIC2.72□□□□□ -1.97
Trim54Q9ERP3 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Trim54Q9ERP3 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Trim54Q9ERP3 Gm2719-201ENSMUST00000191929 444 ntBASIC2.72□□□□□ -1.97
Trim54Q9ERP3 Gm44353-201ENSMUST00000200618 138 ntBASIC2.72□□□□□ -1.97
Trim54Q9ERP3 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.72□□□□□ -1.97
Trim54Q9ERP3 Gm23378-201ENSMUST00000082942 107 ntBASIC2.72□□□□□ -1.97
Trim54Q9ERP3 Gm25632-201ENSMUST00000083112 85 ntBASIC2.72□□□□□ -1.97
Trim54Q9ERP3 Gm26329-201ENSMUST00000093723 110 ntBASIC2.72□□□□□ -1.97
Trim54Q9ERP3 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Trim54Q9ERP3 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.97
Trim54Q9ERP3 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Trim54Q9ERP3 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Trim54Q9ERP3 Gm26500-201ENSMUST00000101867 106 ntBASIC2.71□□□□□ -1.98
Trim54Q9ERP3 Gm12304-201ENSMUST00000120312 385 ntBASIC2.71□□□□□ -1.98
Trim54Q9ERP3 Gm5396-201ENSMUST00000121222 532 ntBASIC2.71□□□□□ -1.98
Trim54Q9ERP3 Gm22316-201ENSMUST00000158012 216 ntBASIC2.71□□□□□ -1.98
Trim54Q9ERP3 Gm25866-201ENSMUST00000158245 112 ntBASIC2.71□□□□□ -1.98
Trim54Q9ERP3 Gm22664-201ENSMUST00000158719 105 ntBASIC2.71□□□□□ -1.98
Trim54Q9ERP3 Gm27369-201ENSMUST00000185182 71 ntBASIC2.71□□□□□ -1.98
Trim54Q9ERP3 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC2.71□□□□□ -1.98
Trim54Q9ERP3 Gm28848-201ENSMUST00000189984 168 ntBASIC2.71□□□□□ -1.98
Trim54Q9ERP3 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.71□□□□□ -1.98
Trim54Q9ERP3 AC133156.1-202ENSMUST00000227284 363 ntBASIC2.71□□□□□ -1.98
Trim54Q9ERP3 Gm23406-201ENSMUST00000082537 122 ntBASIC2.71□□□□□ -1.98
Trim54Q9ERP3 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Trim54Q9ERP3 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.71□□□□□ -1.98
Trim54Q9ERP3 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Trim54Q9ERP3 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Trim54Q9ERP3 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Trim54Q9ERP3 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Trim54Q9ERP3 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Trim54Q9ERP3 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Trim54Q9ERP3 Gm24590-201ENSMUST00000116699 119 ntBASIC2.7□□□□□ -1.98
Trim54Q9ERP3 Gm12646-201ENSMUST00000119144 238 ntBASIC2.7□□□□□ -1.98
Trim54Q9ERP3 Gm14843-201ENSMUST00000119596 212 ntBASIC2.7□□□□□ -1.98
Trim54Q9ERP3 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC2.7□□□□□ -1.98
Trim54Q9ERP3 Gm11606-201ENSMUST00000120706 617 ntBASIC2.7□□□□□ -1.98
Trim54Q9ERP3 Gm24726-201ENSMUST00000158232 121 ntBASIC2.7□□□□□ -1.98
Trim54Q9ERP3 Mir6386-201ENSMUST00000183558 104 ntBASIC2.7□□□□□ -1.98
Trim54Q9ERP3 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Trim54Q9ERP3 Gm43583-201ENSMUST00000199235 303 ntBASIC2.7□□□□□ -1.98
Trim54Q9ERP3 Gm15235-201ENSMUST00000200572 194 ntBASIC2.7□□□□□ -1.98
Trim54Q9ERP3 Gm44024-201ENSMUST00000203008 476 ntBASIC2.7□□□□□ -1.98
Trim54Q9ERP3 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.7□□□□□ -1.98
Trim54Q9ERP3 Gm25199-201ENSMUST00000083095 104 ntBASIC2.7□□□□□ -1.98
Trim54Q9ERP3 Gm25793-201ENSMUST00000083287 107 ntBASIC2.7□□□□□ -1.98
Trim54Q9ERP3 Gm24698-201ENSMUST00000083883 130 ntBASIC2.7□□□□□ -1.98
Trim54Q9ERP3 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.7□□□□□ -1.98
Trim54Q9ERP3 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Trim54Q9ERP3 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
Trim54Q9ERP3 Gm15010-201ENSMUST00000117153 407 ntBASIC2.69□□□□□ -1.98
Trim54Q9ERP3 Gm22447-201ENSMUST00000158155 92 ntBASIC2.69□□□□□ -1.98
Trim54Q9ERP3 Gm22666-201ENSMUST00000158717 164 ntBASIC2.69□□□□□ -1.98
Trim54Q9ERP3 Gm17065-201ENSMUST00000165245 239 ntBASIC2.69□□□□□ -1.98
Trim54Q9ERP3 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.69□□□□□ -1.98
Trim54Q9ERP3 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC2.69□□□□□ -1.98
Trim54Q9ERP3 Gm24799-201ENSMUST00000178431 79 ntBASIC2.69□□□□□ -1.98
Trim54Q9ERP3 Mir378a-201ENSMUST00000198300 66 ntBASIC2.69□□□□□ -1.98
Trim54Q9ERP3 Gm44478-201ENSMUST00000204875 114 ntBASIC2.69□□□□□ -1.98
Trim54Q9ERP3 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC2.69□□□□□ -1.98
Trim54Q9ERP3 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.69□□□□□ -1.98
Trim54Q9ERP3 Gm9174-201ENSMUST00000078149 255 ntBASIC2.69□□□□□ -1.98
Trim54Q9ERP3 Gm6030-201ENSMUST00000078768 402 ntBASIC2.69□□□□□ -1.98
Trim54Q9ERP3 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC2.69□□□□□ -1.98
Trim54Q9ERP3 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
Trim54Q9ERP3 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
Trim54Q9ERP3 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Trim54Q9ERP3 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Trim54Q9ERP3 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Trim54Q9ERP3 Gm13756-201ENSMUST00000117618 222 ntBASIC2.68□□□□□ -1.98
Trim54Q9ERP3 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.68□□□□□ -1.98
Trim54Q9ERP3 Gm24388-201ENSMUST00000177872 107 ntBASIC2.68□□□□□ -1.98
Trim54Q9ERP3 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC2.68□□□□□ -1.98
Trim54Q9ERP3 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.68□□□□□ -1.98
Trim54Q9ERP3 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.68□□□□□ -1.98
Trim54Q9ERP3 Gm22685-201ENSMUST00000082848 106 ntBASIC2.68□□□□□ -1.98
Trim54Q9ERP3 Gm23462-201ENSMUST00000083264 104 ntBASIC2.68□□□□□ -1.98
Trim54Q9ERP3 Gm23731-201ENSMUST00000083749 107 ntBASIC2.68□□□□□ -1.98
Trim54Q9ERP3 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Trim54Q9ERP3 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
Trim54Q9ERP3 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Trim54Q9ERP3 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Trim54Q9ERP3 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
Trim54Q9ERP3 Mir542-201ENSMUST00000102186 85 ntBASIC2.67□□□□□ -1.98
Trim54Q9ERP3 Gm12647-201ENSMUST00000118977 265 ntBASIC2.67□□□□□ -1.98
Trim54Q9ERP3 Gm12924-201ENSMUST00000121747 318 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms