Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 AC116589.9-201ENSMUST00000221462 908 ntBASIC1.95□□□□□ -2.1
Scn4aQ9ER60 Gm24596-201ENSMUST00000122504 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm24584-201ENSMUST00000157972 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm25211-201ENSMUST00000177553 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm23151-201ENSMUST00000178061 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm25245-201ENSMUST00000178139 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm26245-201ENSMUST00000178491 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm23610-201ENSMUST00000178659 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm25312-201ENSMUST00000178972 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm25101-201ENSMUST00000179057 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm26378-201ENSMUST00000179093 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm23712-201ENSMUST00000179713 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm25173-201ENSMUST00000179794 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm24870-201ENSMUST00000179897 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm22645-201ENSMUST00000180010 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm24565-201ENSMUST00000180099 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm23805-201ENSMUST00000180129 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm25327-201ENSMUST00000180263 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm22418-201ENSMUST00000180326 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm27761-201ENSMUST00000184091 131 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Mir3068-202ENSMUST00000197755 79 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm43680-201ENSMUST00000199466 340 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm18991-201ENSMUST00000209225 746 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm23629-201ENSMUST00000082465 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm23924-201ENSMUST00000082474 108 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm22749-201ENSMUST00000082490 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm22747-201ENSMUST00000082495 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm22063-201ENSMUST00000082560 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm23057-201ENSMUST00000082801 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm26328-201ENSMUST00000082821 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm26324-201ENSMUST00000083073 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm24535-201ENSMUST00000083140 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm26127-201ENSMUST00000083193 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm24456-201ENSMUST00000083198 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm24018-201ENSMUST00000083232 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm26263-201ENSMUST00000083281 164 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm25794-201ENSMUST00000083286 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm25577-201ENSMUST00000083414 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm24861-201ENSMUST00000083459 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm23103-201ENSMUST00000083725 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm23732-201ENSMUST00000083751 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm22352-201ENSMUST00000083917 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm24448-201ENSMUST00000083979 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm22886-201ENSMUST00000093714 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm11835-201ENSMUST00000120635 663 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm23381-201ENSMUST00000157676 94 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm21978-201ENSMUST00000179696 377 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Mir6995-201ENSMUST00000183658 71 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Mir6376-201ENSMUST00000185149 131 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm45878-201ENSMUST00000211839 241 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm6109-201ENSMUST00000223297 348 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm22062-201ENSMUST00000082563 107 ntBASIC1.94□□□□□ -2.1
Scn4aQ9ER60 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.93□□□□□ -2.1
Scn4aQ9ER60 Gm12053-201ENSMUST00000119022 252 ntBASIC1.93□□□□□ -2.1
Scn4aQ9ER60 Gm14301-201ENSMUST00000120181 324 ntBASIC1.93□□□□□ -2.1
Scn4aQ9ER60 Gm22340-201ENSMUST00000157717 114 ntBASIC1.93□□□□□ -2.1
Scn4aQ9ER60 Gm23557-201ENSMUST00000157820 138 ntBASIC1.93□□□□□ -2.1
Scn4aQ9ER60 Gm23725-201ENSMUST00000177876 107 ntBASIC1.93□□□□□ -2.1
Scn4aQ9ER60 Gm26335-201ENSMUST00000178449 107 ntBASIC1.93□□□□□ -2.1
Scn4aQ9ER60 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Scn4aQ9ER60 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
Scn4aQ9ER60 Gm5034-201ENSMUST00000199115 634 ntBASIC1.93□□□□□ -2.1
Scn4aQ9ER60 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
Scn4aQ9ER60 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Scn4aQ9ER60 CT009718.4-201ENSMUST00000221881 109 ntBASIC1.93□□□□□ -2.1
Scn4aQ9ER60 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Scn4aQ9ER60 Defa-ps13-201ENSMUST00000120695 204 ntBASIC1.92□□□□□ -2.1
Scn4aQ9ER60 Gm27236-201ENSMUST00000184147 442 ntBASIC1.92□□□□□ -2.1
Scn4aQ9ER60 Gm28151-201ENSMUST00000189404 951 ntBASIC1.92□□□□□ -2.1
Scn4aQ9ER60 Gm28506-201ENSMUST00000189937 150 ntBASIC1.92□□□□□ -2.1
Scn4aQ9ER60 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.92□□□□□ -2.1
Scn4aQ9ER60 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
Scn4aQ9ER60 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.92□□□□□ -2.1
Scn4aQ9ER60 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.92□□□□□ -2.1
Scn4aQ9ER60 AC129208.2-201ENSMUST00000228506 320 ntBASIC1.92□□□□□ -2.1
Scn4aQ9ER60 Mir211-201ENSMUST00000083651 106 ntBASIC1.92□□□□□ -2.1
Scn4aQ9ER60 Gm14364-201ENSMUST00000129209 267 ntBASIC1.91□□□□□ -2.1
Scn4aQ9ER60 Gm25625-201ENSMUST00000157221 96 ntBASIC1.91□□□□□ -2.1
Scn4aQ9ER60 Gm23829-201ENSMUST00000157392 270 ntBASIC1.91□□□□□ -2.1
Scn4aQ9ER60 Gm24942-201ENSMUST00000158328 114 ntBASIC1.91□□□□□ -2.1
Scn4aQ9ER60 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC1.91□□□□□ -2.1
Scn4aQ9ER60 Gm18113-201ENSMUST00000220630 303 ntBASIC1.91□□□□□ -2.1
Scn4aQ9ER60 Gm37598-201ENSMUST00000194506 1301 ntBASIC1.91□□□□□ -2.1
Scn4aQ9ER60 Gm6954-201ENSMUST00000117416 225 ntBASIC1.91□□□□□ -2.1
Scn4aQ9ER60 Gm25384-201ENSMUST00000157807 105 ntBASIC1.91□□□□□ -2.1
Scn4aQ9ER60 Gm25166-201ENSMUST00000158909 111 ntBASIC1.91□□□□□ -2.1
Scn4aQ9ER60 Snora24-201ENSMUST00000174989 130 ntBASIC1.91□□□□□ -2.1
Scn4aQ9ER60 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.91□□□□□ -2.1
Scn4aQ9ER60 Gm22166-201ENSMUST00000178419 121 ntBASIC1.91□□□□□ -2.1
Scn4aQ9ER60 Gm23288-201ENSMUST00000179213 121 ntBASIC1.91□□□□□ -2.1
Scn4aQ9ER60 Mir6370-201ENSMUST00000183510 120 ntBASIC1.91□□□□□ -2.1
Scn4aQ9ER60 Mir7079-201ENSMUST00000184697 69 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms