Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
Upf1Q9EPU0 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Upf1Q9EPU0 Mir29b-2-201ENSMUST00000083478 81 ntBASIC3.72□□□□□ -1.81
Upf1Q9EPU0 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.72□□□□□ -1.81
Upf1Q9EPU0 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Upf1Q9EPU0 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.72□□□□□ -1.81
Upf1Q9EPU0 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Upf1Q9EPU0 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Upf1Q9EPU0 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.71□□□□□ -1.81
Upf1Q9EPU0 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.71□□□□□ -1.82
Upf1Q9EPU0 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Upf1Q9EPU0 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Upf1Q9EPU0 Gm24274-201ENSMUST00000116787 124 ntBASIC3.71□□□□□ -1.82
Upf1Q9EPU0 Gm11356-201ENSMUST00000118974 192 ntBASIC3.71□□□□□ -1.82
Upf1Q9EPU0 Gm23230-201ENSMUST00000157298 133 ntBASIC3.71□□□□□ -1.82
Upf1Q9EPU0 Gm27271-201ENSMUST00000183509 170 ntBASIC3.71□□□□□ -1.82
Upf1Q9EPU0 Mir6386-201ENSMUST00000183558 104 ntBASIC3.71□□□□□ -1.82
Upf1Q9EPU0 Gm27540-201ENSMUST00000184950 187 ntBASIC3.71□□□□□ -1.82
Upf1Q9EPU0 Gm43899-201ENSMUST00000203675 246 ntBASIC3.71□□□□□ -1.82
Upf1Q9EPU0 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC3.71□□□□□ -1.82
Upf1Q9EPU0 Gm45452-201ENSMUST00000210905 177 ntBASIC3.71□□□□□ -1.82
Upf1Q9EPU0 Gm5358-201ENSMUST00000212814 353 ntBASIC3.71□□□□□ -1.82
Upf1Q9EPU0 Gm18015-201ENSMUST00000214879 316 ntBASIC3.71□□□□□ -1.82
Upf1Q9EPU0 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.71□□□□□ -1.82
Upf1Q9EPU0 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
Upf1Q9EPU0 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Upf1Q9EPU0 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Upf1Q9EPU0 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Upf1Q9EPU0 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Upf1Q9EPU0 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Upf1Q9EPU0 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC3.7□□□□□ -1.82
Upf1Q9EPU0 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC3.7□□□□□ -1.82
Upf1Q9EPU0 Gm12797-201ENSMUST00000118645 273 ntBASIC3.7□□□□□ -1.82
Upf1Q9EPU0 Gm25615-201ENSMUST00000177836 94 ntBASIC3.7□□□□□ -1.82
Upf1Q9EPU0 Mir6402-201ENSMUST00000183406 80 ntBASIC3.7□□□□□ -1.82
Upf1Q9EPU0 Gm28900-201ENSMUST00000185232 156 ntBASIC3.7□□□□□ -1.82
Upf1Q9EPU0 Gm44322-201ENSMUST00000196830 115 ntBASIC3.7□□□□□ -1.82
Upf1Q9EPU0 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC3.7□□□□□ -1.82
Upf1Q9EPU0 AC159896.1-201ENSMUST00000215264 215 ntBASIC3.7□□□□□ -1.82
Upf1Q9EPU0 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.7□□□□□ -1.82
Upf1Q9EPU0 Gm22744-201ENSMUST00000083444 65 ntBASIC3.7□□□□□ -1.82
Upf1Q9EPU0 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Upf1Q9EPU0 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Upf1Q9EPU0 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Upf1Q9EPU0 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Upf1Q9EPU0 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.69□□□□□ -1.82
Upf1Q9EPU0 Gm22270-201ENSMUST00000104034 132 ntBASIC3.69□□□□□ -1.82
Upf1Q9EPU0 Gm8244-201ENSMUST00000121254 264 ntBASIC3.69□□□□□ -1.82
Upf1Q9EPU0 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC3.69□□□□□ -1.82
Upf1Q9EPU0 Gm23933-201ENSMUST00000178405 79 ntBASIC3.69□□□□□ -1.82
Upf1Q9EPU0 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.69□□□□□ -1.82
Upf1Q9EPU0 Gm29167-201ENSMUST00000190024 377 ntBASIC3.69□□□□□ -1.82
Upf1Q9EPU0 Gm29022-201ENSMUST00000190702 225 ntBASIC3.69□□□□□ -1.82
Upf1Q9EPU0 AC157476.1-201ENSMUST00000215555 169 ntBASIC3.69□□□□□ -1.82
Upf1Q9EPU0 Gm10092-201ENSMUST00000077110 180 ntBASIC3.69□□□□□ -1.82
Upf1Q9EPU0 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Upf1Q9EPU0 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Upf1Q9EPU0 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.69□□□□□ -1.82
Upf1Q9EPU0 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Upf1Q9EPU0 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Upf1Q9EPU0 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.68□□□□□ -1.82
Upf1Q9EPU0 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Upf1Q9EPU0 Gm26387-201ENSMUST00000104238 132 ntBASIC3.68□□□□□ -1.82
Upf1Q9EPU0 Gm14448-201ENSMUST00000116383 210 ntBASIC3.68□□□□□ -1.82
Upf1Q9EPU0 Gm14073-201ENSMUST00000117344 381 ntBASIC3.68□□□□□ -1.82
Upf1Q9EPU0 Gm15377-201ENSMUST00000119594 246 ntBASIC3.68□□□□□ -1.82
Upf1Q9EPU0 Gm6574-201ENSMUST00000120037 362 ntBASIC3.68□□□□□ -1.82
Upf1Q9EPU0 Gm5396-201ENSMUST00000121222 532 ntBASIC3.68□□□□□ -1.82
Upf1Q9EPU0 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.68□□□□□ -1.82
Upf1Q9EPU0 Gm23048-201ENSMUST00000157237 129 ntBASIC3.68□□□□□ -1.82
Upf1Q9EPU0 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.68□□□□□ -1.82
Upf1Q9EPU0 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC3.68□□□□□ -1.82
Upf1Q9EPU0 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC3.68□□□□□ -1.82
Upf1Q9EPU0 Gm35405-201ENSMUST00000218754 400 ntBASIC3.68□□□□□ -1.82
Upf1Q9EPU0 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.68□□□□□ -1.82
Upf1Q9EPU0 Gm22299-201ENSMUST00000082663 136 ntBASIC3.68□□□□□ -1.82
Upf1Q9EPU0 Gm23461-201ENSMUST00000083265 107 ntBASIC3.68□□□□□ -1.82
Upf1Q9EPU0 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.68□□□□□ -1.82
Upf1Q9EPU0 Gm12080-201ENSMUST00000119821 1883 ntBASIC3.68□□□□□ -1.82
Upf1Q9EPU0 Gm42482-201ENSMUST00000198904 1947 ntBASIC3.68□□□□□ -1.82
Upf1Q9EPU0 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Upf1Q9EPU0 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Upf1Q9EPU0 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Upf1Q9EPU0 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Upf1Q9EPU0 Gm14816-201ENSMUST00000117174 294 ntBASIC3.67□□□□□ -1.82
Upf1Q9EPU0 Gm22482-201ENSMUST00000122563 359 ntBASIC3.67□□□□□ -1.82
Upf1Q9EPU0 Gm25115-201ENSMUST00000157187 140 ntBASIC3.67□□□□□ -1.82
Upf1Q9EPU0 Gm24443-201ENSMUST00000157242 132 ntBASIC3.67□□□□□ -1.82
Upf1Q9EPU0 Gm24908-201ENSMUST00000157294 127 ntBASIC3.67□□□□□ -1.82
Upf1Q9EPU0 Gm28020-201ENSMUST00000157739 67 ntBASIC3.67□□□□□ -1.82
Upf1Q9EPU0 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC3.67□□□□□ -1.82
Upf1Q9EPU0 Gm22108-201ENSMUST00000177961 106 ntBASIC3.67□□□□□ -1.82
Upf1Q9EPU0 Gm24798-201ENSMUST00000179334 106 ntBASIC3.67□□□□□ -1.82
Upf1Q9EPU0 Gm27476-201ENSMUST00000183366 104 ntBASIC3.67□□□□□ -1.82
Upf1Q9EPU0 Gm42774-201ENSMUST00000198854 283 ntBASIC3.67□□□□□ -1.82
Upf1Q9EPU0 Gm43239-201ENSMUST00000200131 201 ntBASIC3.67□□□□□ -1.82
Upf1Q9EPU0 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.67□□□□□ -1.82
Upf1Q9EPU0 Mir125b-2-201ENSMUST00000083538 71 ntBASIC3.67□□□□□ -1.82
Upf1Q9EPU0 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Upf1Q9EPU0 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms