Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm24803-201ENSMUST00000083693 107 ntBASIC1.49□□□□□ -2.17
Cdc40Q9DC48 Gm23103-201ENSMUST00000083725 107 ntBASIC1.49□□□□□ -2.17
Cdc40Q9DC48 Gm22580-201ENSMUST00000083727 107 ntBASIC1.49□□□□□ -2.17
Cdc40Q9DC48 Gm24260-201ENSMUST00000083741 107 ntBASIC1.49□□□□□ -2.17
Cdc40Q9DC48 Gm23732-201ENSMUST00000083751 107 ntBASIC1.49□□□□□ -2.17
Cdc40Q9DC48 Gm22682-201ENSMUST00000083854 107 ntBASIC1.49□□□□□ -2.17
Cdc40Q9DC48 Gm25869-201ENSMUST00000083855 107 ntBASIC1.49□□□□□ -2.17
Cdc40Q9DC48 Gm24693-201ENSMUST00000083885 107 ntBASIC1.49□□□□□ -2.17
Cdc40Q9DC48 Gm26317-201ENSMUST00000083894 107 ntBASIC1.49□□□□□ -2.17
Cdc40Q9DC48 Gm22352-201ENSMUST00000083917 107 ntBASIC1.49□□□□□ -2.17
Cdc40Q9DC48 Gm24448-201ENSMUST00000083979 107 ntBASIC1.49□□□□□ -2.17
Cdc40Q9DC48 Gm22798-201ENSMUST00000083992 107 ntBASIC1.49□□□□□ -2.17
Cdc40Q9DC48 Gm26427-201ENSMUST00000093648 107 ntBASIC1.49□□□□□ -2.17
Cdc40Q9DC48 Gm22886-201ENSMUST00000093714 107 ntBASIC1.49□□□□□ -2.17
Cdc40Q9DC48 Gm22170-201ENSMUST00000097247 107 ntBASIC1.49□□□□□ -2.17
Cdc40Q9DC48 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.49□□□□□ -2.17
Cdc40Q9DC48 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Cdc40Q9DC48 Gm38388-201ENSMUST00000195569 1430 ntBASIC1.49□□□□□ -2.17
Cdc40Q9DC48 Gm14882-201ENSMUST00000117216 218 ntBASIC1.48□□□□□ -2.17
Cdc40Q9DC48 Gm15365-201ENSMUST00000122392 300 ntBASIC1.48□□□□□ -2.17
Cdc40Q9DC48 Gm24262-201ENSMUST00000157431 144 ntBASIC1.48□□□□□ -2.17
Cdc40Q9DC48 Gm24191-201ENSMUST00000157977 122 ntBASIC1.48□□□□□ -2.17
Cdc40Q9DC48 Gm25333-201ENSMUST00000158035 246 ntBASIC1.48□□□□□ -2.17
Cdc40Q9DC48 Gm23714-201ENSMUST00000179259 105 ntBASIC1.48□□□□□ -2.17
Cdc40Q9DC48 Gm11392-201ENSMUST00000181419 710 ntBASIC1.48□□□□□ -2.17
Cdc40Q9DC48 Gm27624-201ENSMUST00000185047 177 ntBASIC1.48□□□□□ -2.17
Cdc40Q9DC48 Gm28740-201ENSMUST00000186142 215 ntBASIC1.48□□□□□ -2.17
Cdc40Q9DC48 Gm28151-201ENSMUST00000189404 951 ntBASIC1.48□□□□□ -2.17
Cdc40Q9DC48 Gm28648-201ENSMUST00000190092 343 ntBASIC1.48□□□□□ -2.17
Cdc40Q9DC48 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC1.48□□□□□ -2.17
Cdc40Q9DC48 Gm18433-201ENSMUST00000192747 197 ntBASIC1.48□□□□□ -2.17
Cdc40Q9DC48 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC1.48□□□□□ -2.17
Cdc40Q9DC48 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Cdc40Q9DC48 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.47□□□□□ -2.17
Cdc40Q9DC48 Gm13714-201ENSMUST00000117313 221 ntBASIC1.47□□□□□ -2.17
Cdc40Q9DC48 Gm13341-201ENSMUST00000120780 672 ntBASIC1.47□□□□□ -2.17
Cdc40Q9DC48 Gm22082-201ENSMUST00000157587 161 ntBASIC1.47□□□□□ -2.17
Cdc40Q9DC48 Gm24902-201ENSMUST00000158126 123 ntBASIC1.47□□□□□ -2.17
Cdc40Q9DC48 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.47□□□□□ -2.17
Cdc40Q9DC48 Gm23523-201ENSMUST00000180190 107 ntBASIC1.47□□□□□ -2.17
Cdc40Q9DC48 Gm27013-201ENSMUST00000182441 1024 ntBASIC1.47□□□□□ -2.17
Cdc40Q9DC48 Gm27385-201ENSMUST00000184747 104 ntBASIC1.47□□□□□ -2.17
Cdc40Q9DC48 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.47□□□□□ -2.17
Cdc40Q9DC48 Gm42570-201ENSMUST00000195937 292 ntBASIC1.47□□□□□ -2.17
Cdc40Q9DC48 Gm44482-201ENSMUST00000199232 103 ntBASIC1.47□□□□□ -2.17
Cdc40Q9DC48 Mir691-201ENSMUST00000199719 78 ntBASIC1.47□□□□□ -2.17
Cdc40Q9DC48 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.47□□□□□ -2.17
Cdc40Q9DC48 Gm2829-201ENSMUST00000213121 499 ntBASIC1.47□□□□□ -2.17
Cdc40Q9DC48 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.47□□□□□ -2.17
Cdc40Q9DC48 Gm45815-201ENSMUST00000220241 146 ntBASIC1.47□□□□□ -2.17
Cdc40Q9DC48 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC1.47□□□□□ -2.17
Cdc40Q9DC48 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.47□□□□□ -2.17
Cdc40Q9DC48 Ear14-201ENSMUST00000049559 468 ntBASIC1.47□□□□□ -2.17
Cdc40Q9DC48 Mir410-201ENSMUST00000083563 81 ntBASIC1.47□□□□□ -2.17
Cdc40Q9DC48 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Cdc40Q9DC48 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.46□□□□□ -2.18
Cdc40Q9DC48 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.46□□□□□ -2.18
Cdc40Q9DC48 Mir223-201ENSMUST00000102112 110 ntBASIC1.46□□□□□ -2.18
Cdc40Q9DC48 Gm17132-201ENSMUST00000109542 1158 ntBASIC1.46□□□□□ -2.18
Cdc40Q9DC48 Gm15115-201ENSMUST00000121145 264 ntBASIC1.46□□□□□ -2.18
Cdc40Q9DC48 Gm25269-201ENSMUST00000122601 104 ntBASIC1.46□□□□□ -2.18
Cdc40Q9DC48 Gm23718-201ENSMUST00000157350 307 ntBASIC1.46□□□□□ -2.18
Cdc40Q9DC48 Gm26181-201ENSMUST00000157687 106 ntBASIC1.46□□□□□ -2.18
Cdc40Q9DC48 Gm22731-201ENSMUST00000158086 94 ntBASIC1.46□□□□□ -2.18
Cdc40Q9DC48 Gm27510-201ENSMUST00000158214 64 ntBASIC1.46□□□□□ -2.18
Cdc40Q9DC48 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Cdc40Q9DC48 Gm23967-201ENSMUST00000175062 78 ntBASIC1.46□□□□□ -2.18
Cdc40Q9DC48 Gm21815-201ENSMUST00000178213 664 ntBASIC1.46□□□□□ -2.18
Cdc40Q9DC48 Gm20874-201ENSMUST00000178356 663 ntBASIC1.46□□□□□ -2.18
Cdc40Q9DC48 Mir6355-201ENSMUST00000183687 106 ntBASIC1.46□□□□□ -2.18
Cdc40Q9DC48 Gm28437-201ENSMUST00000190277 783 ntBASIC1.46□□□□□ -2.18
Cdc40Q9DC48 Gm19123-201ENSMUST00000190716 651 ntBASIC1.46□□□□□ -2.18
Cdc40Q9DC48 Gm38261-201ENSMUST00000192608 316 ntBASIC1.46□□□□□ -2.18
Cdc40Q9DC48 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Cdc40Q9DC48 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC1.46□□□□□ -2.18
Cdc40Q9DC48 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Cdc40Q9DC48 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.46□□□□□ -2.18
Cdc40Q9DC48 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.46□□□□□ -2.18
Cdc40Q9DC48 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Cdc40Q9DC48 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Cdc40Q9DC48 Snord38a-201ENSMUST00000083746 71 ntBASIC1.46□□□□□ -2.18
Cdc40Q9DC48 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC1.45□□□□□ -2.18
Cdc40Q9DC48 Gm11854-201ENSMUST00000117839 446 ntBASIC1.45□□□□□ -2.18
Cdc40Q9DC48 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.45□□□□□ -2.18
Cdc40Q9DC48 Gm26278-201ENSMUST00000157098 132 ntBASIC1.45□□□□□ -2.18
Cdc40Q9DC48 Gm23331-201ENSMUST00000157423 108 ntBASIC1.45□□□□□ -2.18
Cdc40Q9DC48 Gm20477-201ENSMUST00000174028 280 ntBASIC1.45□□□□□ -2.18
Cdc40Q9DC48 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.45□□□□□ -2.18
Cdc40Q9DC48 Mir6351-201ENSMUST00000183826 99 ntBASIC1.45□□□□□ -2.18
Cdc40Q9DC48 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC1.45□□□□□ -2.18
Cdc40Q9DC48 Gm44308-201ENSMUST00000197080 99 ntBASIC1.45□□□□□ -2.18
Cdc40Q9DC48 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Cdc40Q9DC48 Gm45365-201ENSMUST00000209489 256 ntBASIC1.45□□□□□ -2.18
Cdc40Q9DC48 AL772265.1-201ENSMUST00000214379 305 ntBASIC1.45□□□□□ -2.18
Cdc40Q9DC48 AC124346.1-201ENSMUST00000218539 364 ntBASIC1.45□□□□□ -2.18
Cdc40Q9DC48 AC153864.2-201ENSMUST00000220424 292 ntBASIC1.45□□□□□ -2.18
Cdc40Q9DC48 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.45□□□□□ -2.18
Cdc40Q9DC48 Gm26457-201ENSMUST00000082678 78 ntBASIC1.45□□□□□ -2.18
Cdc40Q9DC48 Gm23100-201ENSMUST00000083455 141 ntBASIC1.45□□□□□ -2.18
Cdc40Q9DC48 Mir429-201ENSMUST00000083493 83 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms