Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm40810-201ENSMUST00000219149 253 ntBASIC1.25□□□□□ -2.21
Chmp2aQ9DB34 AC159297.2-201ENSMUST00000219567 1075 ntBASIC1.25□□□□□ -2.21
Chmp2aQ9DB34 AC156560.1-201ENSMUST00000221425 256 ntBASIC1.25□□□□□ -2.21
Chmp2aQ9DB34 Gm21937-201ENSMUST00000222825 218 ntBASIC1.25□□□□□ -2.21
Chmp2aQ9DB34 CT025538.2-201ENSMUST00000226083 772 ntBASIC1.25□□□□□ -2.21
Chmp2aQ9DB34 Snord14a-201ENSMUST00000082807 87 ntBASIC1.25□□□□□ -2.21
Chmp2aQ9DB34 Mir340-201ENSMUST00000083483 98 ntBASIC1.25□□□□□ -2.21
Chmp2aQ9DB34 Gm23656-201ENSMUST00000122626 112 ntBASIC1.24□□□□□ -2.21
Chmp2aQ9DB34 Gm25371-201ENSMUST00000158162 101 ntBASIC1.24□□□□□ -2.21
Chmp2aQ9DB34 Gm22074-201ENSMUST00000158595 113 ntBASIC1.24□□□□□ -2.21
Chmp2aQ9DB34 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.24□□□□□ -2.21
Chmp2aQ9DB34 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.24□□□□□ -2.21
Chmp2aQ9DB34 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.24□□□□□ -2.21
Chmp2aQ9DB34 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.24□□□□□ -2.21
Chmp2aQ9DB34 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.24□□□□□ -2.21
Chmp2aQ9DB34 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.24□□□□□ -2.21
Chmp2aQ9DB34 Gm23714-201ENSMUST00000179259 105 ntBASIC1.24□□□□□ -2.21
Chmp2aQ9DB34 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.24□□□□□ -2.21
Chmp2aQ9DB34 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.24□□□□□ -2.21
Chmp2aQ9DB34 Snord116l12-201ENSMUST00000179816 94 ntBASIC1.24□□□□□ -2.21
Chmp2aQ9DB34 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.24□□□□□ -2.21
Chmp2aQ9DB34 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Chmp2aQ9DB34 Gm27711-201ENSMUST00000183802 118 ntBASIC1.24□□□□□ -2.21
Chmp2aQ9DB34 Mir7665-201ENSMUST00000184907 63 ntBASIC1.24□□□□□ -2.21
Chmp2aQ9DB34 Gm28995-201ENSMUST00000186625 261 ntBASIC1.24□□□□□ -2.21
Chmp2aQ9DB34 Gm28912-201ENSMUST00000189001 234 ntBASIC1.24□□□□□ -2.21
Chmp2aQ9DB34 Gm37438-201ENSMUST00000192813 393 ntBASIC1.24□□□□□ -2.21
Chmp2aQ9DB34 Gm44483-201ENSMUST00000197203 97 ntBASIC1.24□□□□□ -2.21
Chmp2aQ9DB34 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC1.24□□□□□ -2.21
Chmp2aQ9DB34 Snora34-201ENSMUST00000083402 138 ntBASIC1.24□□□□□ -2.21
Chmp2aQ9DB34 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.23□□□□□ -2.21
Chmp2aQ9DB34 Gm22591-201ENSMUST00000104243 106 ntBASIC1.23□□□□□ -2.21
Chmp2aQ9DB34 Gm25423-201ENSMUST00000157609 107 ntBASIC1.23□□□□□ -2.21
Chmp2aQ9DB34 Gm23317-201ENSMUST00000157999 129 ntBASIC1.23□□□□□ -2.21
Chmp2aQ9DB34 Gm22537-201ENSMUST00000158172 199 ntBASIC1.23□□□□□ -2.21
Chmp2aQ9DB34 Gm26405-201ENSMUST00000158495 100 ntBASIC1.23□□□□□ -2.21
Chmp2aQ9DB34 Gm24551-201ENSMUST00000158645 92 ntBASIC1.23□□□□□ -2.21
Chmp2aQ9DB34 Gm23208-201ENSMUST00000158666 127 ntBASIC1.23□□□□□ -2.21
Chmp2aQ9DB34 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.23□□□□□ -2.21
Chmp2aQ9DB34 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
Chmp2aQ9DB34 Gm25956-201ENSMUST00000175115 217 ntBASIC1.23□□□□□ -2.21
Chmp2aQ9DB34 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Chmp2aQ9DB34 Gm24862-201ENSMUST00000179103 79 ntBASIC1.23□□□□□ -2.21
Chmp2aQ9DB34 Gm23310-201ENSMUST00000179105 79 ntBASIC1.23□□□□□ -2.21
Chmp2aQ9DB34 Gm25461-201ENSMUST00000179293 79 ntBASIC1.23□□□□□ -2.21
Chmp2aQ9DB34 Gm27490-201ENSMUST00000184754 128 ntBASIC1.23□□□□□ -2.21
Chmp2aQ9DB34 Gm29037-201ENSMUST00000189092 313 ntBASIC1.23□□□□□ -2.21
Chmp2aQ9DB34 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.23□□□□□ -2.21
Chmp2aQ9DB34 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC1.23□□□□□ -2.21
Chmp2aQ9DB34 Mir6962-201ENSMUST00000199512 63 ntBASIC1.23□□□□□ -2.21
Chmp2aQ9DB34 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.23□□□□□ -2.21
Chmp2aQ9DB34 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.23□□□□□ -2.21
Chmp2aQ9DB34 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.23□□□□□ -2.21
Chmp2aQ9DB34 Mir343-201ENSMUST00000102360 75 ntBASIC1.22□□□□□ -2.21
Chmp2aQ9DB34 Gm22780-201ENSMUST00000104084 132 ntBASIC1.22□□□□□ -2.21
Chmp2aQ9DB34 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Chmp2aQ9DB34 Gm14937-201ENSMUST00000119709 208 ntBASIC1.22□□□□□ -2.21
Chmp2aQ9DB34 Gm22027-201ENSMUST00000122737 127 ntBASIC1.22□□□□□ -2.21
Chmp2aQ9DB34 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC1.22□□□□□ -2.21
Chmp2aQ9DB34 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.22□□□□□ -2.21
Chmp2aQ9DB34 Gm22510-201ENSMUST00000179304 79 ntBASIC1.22□□□□□ -2.21
Chmp2aQ9DB34 Gm26336-201ENSMUST00000179449 79 ntBASIC1.22□□□□□ -2.21
Chmp2aQ9DB34 Gm26390-201ENSMUST00000179628 79 ntBASIC1.22□□□□□ -2.21
Chmp2aQ9DB34 Gm28740-201ENSMUST00000186142 215 ntBASIC1.22□□□□□ -2.21
Chmp2aQ9DB34 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC1.22□□□□□ -2.21
Chmp2aQ9DB34 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.22□□□□□ -2.21
Chmp2aQ9DB34 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.22□□□□□ -2.21
Chmp2aQ9DB34 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC1.22□□□□□ -2.21
Chmp2aQ9DB34 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.22□□□□□ -2.21
Chmp2aQ9DB34 Gm10092-201ENSMUST00000077110 180 ntBASIC1.22□□□□□ -2.21
Chmp2aQ9DB34 Mir463-201ENSMUST00000093570 75 ntBASIC1.22□□□□□ -2.21
Chmp2aQ9DB34 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.22□□□□□ -2.21
Chmp2aQ9DB34 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.22□□□□□ -2.21
Chmp2aQ9DB34 Gm12512-201ENSMUST00000119620 217 ntBASIC1.21□□□□□ -2.22
Chmp2aQ9DB34 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC1.21□□□□□ -2.22
Chmp2aQ9DB34 Gm22485-201ENSMUST00000157990 109 ntBASIC1.21□□□□□ -2.22
Chmp2aQ9DB34 Gm22733-201ENSMUST00000158094 91 ntBASIC1.21□□□□□ -2.22
Chmp2aQ9DB34 Gm3111-201ENSMUST00000167426 490 ntBASIC1.21□□□□□ -2.22
Chmp2aQ9DB34 Gm23145-201ENSMUST00000178912 79 ntBASIC1.21□□□□□ -2.22
Chmp2aQ9DB34 Gm29005-201ENSMUST00000186773 320 ntBASIC1.21□□□□□ -2.22
Chmp2aQ9DB34 Gm9156-201ENSMUST00000189660 463 ntBASIC1.21□□□□□ -2.22
Chmp2aQ9DB34 CT025689.4-201ENSMUST00000225926 601 ntBASIC1.21□□□□□ -2.22
Chmp2aQ9DB34 Gm22572-201ENSMUST00000082985 105 ntBASIC1.21□□□□□ -2.22
Chmp2aQ9DB34 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Chmp2aQ9DB34 Mir450-2-201ENSMUST00000102444 69 ntBASIC1.2□□□□□ -2.22
Chmp2aQ9DB34 Gm22193-201ENSMUST00000116868 76 ntBASIC1.2□□□□□ -2.22
Chmp2aQ9DB34 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Chmp2aQ9DB34 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.2□□□□□ -2.22
Chmp2aQ9DB34 Gm24366-201ENSMUST00000175383 86 ntBASIC1.2□□□□□ -2.22
Chmp2aQ9DB34 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC1.2□□□□□ -2.22
Chmp2aQ9DB34 Gm22851-201ENSMUST00000178741 94 ntBASIC1.2□□□□□ -2.22
Chmp2aQ9DB34 Gm25074-201ENSMUST00000178782 94 ntBASIC1.2□□□□□ -2.22
Chmp2aQ9DB34 Gm18854-201ENSMUST00000211196 329 ntBASIC1.2□□□□□ -2.22
Chmp2aQ9DB34 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.2□□□□□ -2.22
Chmp2aQ9DB34 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Chmp2aQ9DB34 Gm23245-201ENSMUST00000083370 135 ntBASIC1.2□□□□□ -2.22
Chmp2aQ9DB34 Gm14355-201ENSMUST00000117352 264 ntBASIC1.19□□□□□ -2.22
Chmp2aQ9DB34 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.19□□□□□ -2.22
Chmp2aQ9DB34 Gm14362-201ENSMUST00000121679 273 ntBASIC1.19□□□□□ -2.22
Chmp2aQ9DB34 Gm14364-201ENSMUST00000129209 267 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 131.4 ms