Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm14923-201ENSMUST00000118270 155 ntBASIC1.2□□□□□ -2.22
Ccdc3Q9D6Y1 Gm12053-201ENSMUST00000119022 252 ntBASIC1.2□□□□□ -2.22
Ccdc3Q9D6Y1 Gm23331-201ENSMUST00000157423 108 ntBASIC1.2□□□□□ -2.22
Ccdc3Q9D6Y1 Gm25768-201ENSMUST00000158570 98 ntBASIC1.2□□□□□ -2.22
Ccdc3Q9D6Y1 Gm23340-201ENSMUST00000158955 123 ntBASIC1.2□□□□□ -2.22
Ccdc3Q9D6Y1 Gm3111-201ENSMUST00000167426 490 ntBASIC1.2□□□□□ -2.22
Ccdc3Q9D6Y1 Gm42834-201ENSMUST00000196845 256 ntBASIC1.2□□□□□ -2.22
Ccdc3Q9D6Y1 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Ccdc3Q9D6Y1 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC1.2□□□□□ -2.22
Ccdc3Q9D6Y1 Gm45116-201ENSMUST00000207392 275 ntBASIC1.2□□□□□ -2.22
Ccdc3Q9D6Y1 Gm29817-201ENSMUST00000210098 172 ntBASIC1.2□□□□□ -2.22
Ccdc3Q9D6Y1 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.2□□□□□ -2.22
Ccdc3Q9D6Y1 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.2□□□□□ -2.22
Ccdc3Q9D6Y1 AC170810.3-201ENSMUST00000226177 374 ntBASIC1.2□□□□□ -2.22
Ccdc3Q9D6Y1 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.2□□□□□ -2.22
Ccdc3Q9D6Y1 AC166344.2-201ENSMUST00000226747 374 ntBASIC1.2□□□□□ -2.22
Ccdc3Q9D6Y1 n-R5s37-201ENSMUST00000082533 118 ntBASIC1.2□□□□□ -2.22
Ccdc3Q9D6Y1 Gm22229-201ENSMUST00000082987 108 ntBASIC1.2□□□□□ -2.22
Ccdc3Q9D6Y1 Mir196b-201ENSMUST00000083509 85 ntBASIC1.2□□□□□ -2.22
Ccdc3Q9D6Y1 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Ccdc3Q9D6Y1 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Ccdc3Q9D6Y1 Gm24480-201ENSMUST00000157442 103 ntBASIC1.19□□□□□ -2.22
Ccdc3Q9D6Y1 Gm24962-201ENSMUST00000157917 109 ntBASIC1.19□□□□□ -2.22
Ccdc3Q9D6Y1 Gm22075-201ENSMUST00000158599 192 ntBASIC1.19□□□□□ -2.22
Ccdc3Q9D6Y1 Gm25162-201ENSMUST00000158906 159 ntBASIC1.19□□□□□ -2.22
Ccdc3Q9D6Y1 Gm23144-201ENSMUST00000180226 107 ntBASIC1.19□□□□□ -2.22
Ccdc3Q9D6Y1 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Ccdc3Q9D6Y1 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Ccdc3Q9D6Y1 CT009713.9-201ENSMUST00000223604 389 ntBASIC1.19□□□□□ -2.22
Ccdc3Q9D6Y1 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Ccdc3Q9D6Y1 Gm25495-201ENSMUST00000104431 131 ntBASIC1.18□□□□□ -2.22
Ccdc3Q9D6Y1 Gm15077-201ENSMUST00000122344 362 ntBASIC1.18□□□□□ -2.22
Ccdc3Q9D6Y1 Gm24481-201ENSMUST00000157210 102 ntBASIC1.18□□□□□ -2.22
Ccdc3Q9D6Y1 Gm23641-201ENSMUST00000157857 101 ntBASIC1.18□□□□□ -2.22
Ccdc3Q9D6Y1 Gm24677-201ENSMUST00000158755 150 ntBASIC1.18□□□□□ -2.22
Ccdc3Q9D6Y1 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Ccdc3Q9D6Y1 Gm27711-201ENSMUST00000183802 118 ntBASIC1.18□□□□□ -2.22
Ccdc3Q9D6Y1 Mir6394-201ENSMUST00000184738 99 ntBASIC1.18□□□□□ -2.22
Ccdc3Q9D6Y1 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.18□□□□□ -2.22
Ccdc3Q9D6Y1 Gm43914-201ENSMUST00000203592 594 ntBASIC1.18□□□□□ -2.22
Ccdc3Q9D6Y1 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.18□□□□□ -2.22
Ccdc3Q9D6Y1 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.18□□□□□ -2.22
Ccdc3Q9D6Y1 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Ccdc3Q9D6Y1 Gm15010-201ENSMUST00000117153 407 ntBASIC1.17□□□□□ -2.22
Ccdc3Q9D6Y1 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC1.17□□□□□ -2.22
Ccdc3Q9D6Y1 Gm23124-201ENSMUST00000157650 107 ntBASIC1.17□□□□□ -2.22
Ccdc3Q9D6Y1 Gm23589-201ENSMUST00000157660 105 ntBASIC1.17□□□□□ -2.22
Ccdc3Q9D6Y1 Gm9593-201ENSMUST00000166034 469 ntBASIC1.17□□□□□ -2.22
Ccdc3Q9D6Y1 Gm20689-201ENSMUST00000176033 279 ntBASIC1.17□□□□□ -2.22
Ccdc3Q9D6Y1 Gm37727-201ENSMUST00000191637 819 ntBASIC1.17□□□□□ -2.22
Ccdc3Q9D6Y1 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC1.17□□□□□ -2.22
Ccdc3Q9D6Y1 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC1.17□□□□□ -2.22
Ccdc3Q9D6Y1 AC156560.1-201ENSMUST00000221425 256 ntBASIC1.17□□□□□ -2.22
Ccdc3Q9D6Y1 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.17□□□□□ -2.22
Ccdc3Q9D6Y1 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.17□□□□□ -2.22
Ccdc3Q9D6Y1 Gm25409-201ENSMUST00000083764 131 ntBASIC1.17□□□□□ -2.22
Ccdc3Q9D6Y1 Gm24490-201ENSMUST00000083803 98 ntBASIC1.17□□□□□ -2.22
Ccdc3Q9D6Y1 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.16□□□□□ -2.22
Ccdc3Q9D6Y1 Gm15266-201ENSMUST00000119635 255 ntBASIC1.16□□□□□ -2.22
Ccdc3Q9D6Y1 Gm23981-201ENSMUST00000157136 106 ntBASIC1.16□□□□□ -2.22
Ccdc3Q9D6Y1 Gm22733-201ENSMUST00000158094 91 ntBASIC1.16□□□□□ -2.22
Ccdc3Q9D6Y1 Gm7925-201ENSMUST00000166690 401 ntBASIC1.16□□□□□ -2.22
Ccdc3Q9D6Y1 Mir3057-201ENSMUST00000175040 91 ntBASIC1.16□□□□□ -2.22
Ccdc3Q9D6Y1 Gm20613-201ENSMUST00000175828 345 ntBASIC1.16□□□□□ -2.22
Ccdc3Q9D6Y1 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC1.16□□□□□ -2.22
Ccdc3Q9D6Y1 Gm21754-201ENSMUST00000177550 479 ntBASIC1.16□□□□□ -2.22
Ccdc3Q9D6Y1 Gm23145-201ENSMUST00000178912 79 ntBASIC1.16□□□□□ -2.22
Ccdc3Q9D6Y1 Mir6388-201ENSMUST00000184417 75 ntBASIC1.16□□□□□ -2.22
Ccdc3Q9D6Y1 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC1.16□□□□□ -2.22
Ccdc3Q9D6Y1 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC1.16□□□□□ -2.22
Ccdc3Q9D6Y1 Gm18971-201ENSMUST00000197240 374 ntBASIC1.16□□□□□ -2.22
Ccdc3Q9D6Y1 Gm31230-201ENSMUST00000199725 785 ntBASIC1.16□□□□□ -2.22
Ccdc3Q9D6Y1 Gm45456-201ENSMUST00000210841 243 ntBASIC1.16□□□□□ -2.22
Ccdc3Q9D6Y1 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Ccdc3Q9D6Y1 AC159297.2-201ENSMUST00000219567 1075 ntBASIC1.16□□□□□ -2.22
Ccdc3Q9D6Y1 Gm24268-201ENSMUST00000082990 110 ntBASIC1.16□□□□□ -2.22
Ccdc3Q9D6Y1 Gm22577-201ENSMUST00000083731 109 ntBASIC1.16□□□□□ -2.22
Ccdc3Q9D6Y1 Rny1-201ENSMUST00000083767 112 ntBASIC1.16□□□□□ -2.22
Ccdc3Q9D6Y1 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.16□□□□□ -2.22
Ccdc3Q9D6Y1 AC163660.3-201ENSMUST00000224253 1563 ntBASIC1.16□□□□□ -2.22
Ccdc3Q9D6Y1 Gm20541-201ENSMUST00000173035 1406 ntBASIC1.15□□□□□ -2.22
Ccdc3Q9D6Y1 Mir450-2-201ENSMUST00000102444 69 ntBASIC1.15□□□□□ -2.23
Ccdc3Q9D6Y1 Mir582-201ENSMUST00000103758 81 ntBASIC1.15□□□□□ -2.23
Ccdc3Q9D6Y1 Gm23907-201ENSMUST00000104595 189 ntBASIC1.15□□□□□ -2.23
Ccdc3Q9D6Y1 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC1.15□□□□□ -2.23
Ccdc3Q9D6Y1 Gm24896-201ENSMUST00000122741 135 ntBASIC1.15□□□□□ -2.23
Ccdc3Q9D6Y1 Gm23170-201ENSMUST00000157158 106 ntBASIC1.15□□□□□ -2.23
Ccdc3Q9D6Y1 Gm25059-201ENSMUST00000157367 117 ntBASIC1.15□□□□□ -2.23
Ccdc3Q9D6Y1 Gm24851-201ENSMUST00000158028 103 ntBASIC1.15□□□□□ -2.23
Ccdc3Q9D6Y1 Gm24942-201ENSMUST00000158328 114 ntBASIC1.15□□□□□ -2.23
Ccdc3Q9D6Y1 Gm22944-201ENSMUST00000158662 133 ntBASIC1.15□□□□□ -2.23
Ccdc3Q9D6Y1 Gm22663-201ENSMUST00000158721 102 ntBASIC1.15□□□□□ -2.23
Ccdc3Q9D6Y1 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
Ccdc3Q9D6Y1 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
Ccdc3Q9D6Y1 Gm24518-201ENSMUST00000180275 94 ntBASIC1.15□□□□□ -2.23
Ccdc3Q9D6Y1 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC1.15□□□□□ -2.23
Ccdc3Q9D6Y1 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC1.15□□□□□ -2.23
Ccdc3Q9D6Y1 Ighv12-1-201ENSMUST00000195542 329 ntBASIC1.15□□□□□ -2.23
Ccdc3Q9D6Y1 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.15□□□□□ -2.23
Ccdc3Q9D6Y1 Gm42506-201ENSMUST00000202009 150 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 120.4 ms