Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm27399-201ENSMUST00000184250 78 ntBASIC2.35□□□□□ -2.03
Vps28Q9D1C8 Gm29397-201ENSMUST00000185205 333 ntBASIC2.35□□□□□ -2.03
Vps28Q9D1C8 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Vps28Q9D1C8 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Vps28Q9D1C8 Gm28848-201ENSMUST00000189984 168 ntBASIC2.35□□□□□ -2.03
Vps28Q9D1C8 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Vps28Q9D1C8 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.35□□□□□ -2.03
Vps28Q9D1C8 AC102369.1-201ENSMUST00000218415 373 ntBASIC2.35□□□□□ -2.03
Vps28Q9D1C8 AC164117.2-201ENSMUST00000222090 327 ntBASIC2.35□□□□□ -2.03
Vps28Q9D1C8 CT009713.9-201ENSMUST00000223604 389 ntBASIC2.35□□□□□ -2.03
Vps28Q9D1C8 Snord68-201ENSMUST00000082516 86 ntBASIC2.35□□□□□ -2.03
Vps28Q9D1C8 Gm25124-201ENSMUST00000083345 164 ntBASIC2.35□□□□□ -2.03
Vps28Q9D1C8 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC2.35□□□□□ -2.03
Vps28Q9D1C8 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
Vps28Q9D1C8 Gm23472-201ENSMUST00000101806 191 ntBASIC2.34□□□□□ -2.03
Vps28Q9D1C8 Gm6956-201ENSMUST00000134724 546 ntBASIC2.34□□□□□ -2.03
Vps28Q9D1C8 Gm25059-201ENSMUST00000157367 117 ntBASIC2.34□□□□□ -2.03
Vps28Q9D1C8 Gm22554-201ENSMUST00000157798 147 ntBASIC2.34□□□□□ -2.03
Vps28Q9D1C8 Gm22113-201ENSMUST00000158343 104 ntBASIC2.34□□□□□ -2.03
Vps28Q9D1C8 Gm24499-201ENSMUST00000158446 104 ntBASIC2.34□□□□□ -2.03
Vps28Q9D1C8 Gm24497-201ENSMUST00000177868 191 ntBASIC2.34□□□□□ -2.03
Vps28Q9D1C8 Gm25939-201ENSMUST00000179876 191 ntBASIC2.34□□□□□ -2.03
Vps28Q9D1C8 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC2.34□□□□□ -2.03
Vps28Q9D1C8 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.34□□□□□ -2.03
Vps28Q9D1C8 Gm37557-201ENSMUST00000191640 139 ntBASIC2.34□□□□□ -2.03
Vps28Q9D1C8 Gm42672-201ENSMUST00000197821 352 ntBASIC2.34□□□□□ -2.03
Vps28Q9D1C8 Gm44564-201ENSMUST00000207985 180 ntBASIC2.34□□□□□ -2.03
Vps28Q9D1C8 Gm46389-201ENSMUST00000223199 392 ntBASIC2.34□□□□□ -2.03
Vps28Q9D1C8 AC167669.4-201ENSMUST00000225967 140 ntBASIC2.34□□□□□ -2.03
Vps28Q9D1C8 Gm23444-201ENSMUST00000082922 191 ntBASIC2.34□□□□□ -2.03
Vps28Q9D1C8 Gm25578-201ENSMUST00000083406 104 ntBASIC2.34□□□□□ -2.03
Vps28Q9D1C8 Mir423-201ENSMUST00000083584 109 ntBASIC2.34□□□□□ -2.03
Vps28Q9D1C8 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Vps28Q9D1C8 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.33□□□□□ -2.04
Vps28Q9D1C8 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
Vps28Q9D1C8 Gm42536-201ENSMUST00000197562 1613 ntBASIC2.33□□□□□ -2.04
Vps28Q9D1C8 Gm26342-201ENSMUST00000104557 129 ntBASIC2.33□□□□□ -2.04
Vps28Q9D1C8 Gm22713-201ENSMUST00000116895 130 ntBASIC2.33□□□□□ -2.04
Vps28Q9D1C8 Gm25543-201ENSMUST00000122678 312 ntBASIC2.33□□□□□ -2.04
Vps28Q9D1C8 Gm22037-201ENSMUST00000157280 296 ntBASIC2.33□□□□□ -2.04
Vps28Q9D1C8 Gm17100-201ENSMUST00000168963 272 ntBASIC2.33□□□□□ -2.04
Vps28Q9D1C8 Ighv1-46-201ENSMUST00000193988 351 ntBASIC2.33□□□□□ -2.04
Vps28Q9D1C8 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
Vps28Q9D1C8 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Vps28Q9D1C8 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Vps28Q9D1C8 Gm11798-201ENSMUST00000119150 421 ntBASIC2.32□□□□□ -2.04
Vps28Q9D1C8 Gm14588-201ENSMUST00000119895 172 ntBASIC2.32□□□□□ -2.04
Vps28Q9D1C8 Gm13729-201ENSMUST00000120328 406 ntBASIC2.32□□□□□ -2.04
Vps28Q9D1C8 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.32□□□□□ -2.04
Vps28Q9D1C8 Gm14775-201ENSMUST00000122089 310 ntBASIC2.32□□□□□ -2.04
Vps28Q9D1C8 Gm27410-201ENSMUST00000183851 115 ntBASIC2.32□□□□□ -2.04
Vps28Q9D1C8 Gm44477-201ENSMUST00000199661 110 ntBASIC2.32□□□□□ -2.04
Vps28Q9D1C8 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC2.32□□□□□ -2.04
Vps28Q9D1C8 Gm45386-201ENSMUST00000210194 218 ntBASIC2.32□□□□□ -2.04
Vps28Q9D1C8 AC154296.2-201ENSMUST00000214696 545 ntBASIC2.32□□□□□ -2.04
Vps28Q9D1C8 Mir181a-1-201ENSMUST00000083631 87 ntBASIC2.32□□□□□ -2.04
Vps28Q9D1C8 Gm26175-201ENSMUST00000083794 131 ntBASIC2.32□□□□□ -2.04
Vps28Q9D1C8 Gm24698-201ENSMUST00000083883 130 ntBASIC2.32□□□□□ -2.04
Vps28Q9D1C8 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.32□□□□□ -2.04
Vps28Q9D1C8 Gm42755-201ENSMUST00000198533 1493 ntBASIC2.32□□□□□ -2.04
Vps28Q9D1C8 Gm15844-201ENSMUST00000118016 576 ntBASIC2.31□□□□□ -2.04
Vps28Q9D1C8 Gm14972-201ENSMUST00000121780 364 ntBASIC2.31□□□□□ -2.04
Vps28Q9D1C8 Gm24937-201ENSMUST00000122597 134 ntBASIC2.31□□□□□ -2.04
Vps28Q9D1C8 Gm26280-201ENSMUST00000157096 101 ntBASIC2.31□□□□□ -2.04
Vps28Q9D1C8 Gm22083-201ENSMUST00000157586 102 ntBASIC2.31□□□□□ -2.04
Vps28Q9D1C8 Gm16561-201ENSMUST00000163001 192 ntBASIC2.31□□□□□ -2.04
Vps28Q9D1C8 Gm25707-201ENSMUST00000175120 96 ntBASIC2.31□□□□□ -2.04
Vps28Q9D1C8 Gm27878-201ENSMUST00000184000 106 ntBASIC2.31□□□□□ -2.04
Vps28Q9D1C8 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.31□□□□□ -2.04
Vps28Q9D1C8 Gm3724-201ENSMUST00000197957 349 ntBASIC2.31□□□□□ -2.04
Vps28Q9D1C8 Gm44482-201ENSMUST00000199232 103 ntBASIC2.31□□□□□ -2.04
Vps28Q9D1C8 Gm43583-201ENSMUST00000199235 303 ntBASIC2.31□□□□□ -2.04
Vps28Q9D1C8 Mir497-201ENSMUST00000200557 84 ntBASIC2.31□□□□□ -2.04
Vps28Q9D1C8 Gm24313-201ENSMUST00000082561 133 ntBASIC2.31□□□□□ -2.04
Vps28Q9D1C8 Gm22978-201ENSMUST00000082607 160 ntBASIC2.31□□□□□ -2.04
Vps28Q9D1C8 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Vps28Q9D1C8 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.3□□□□□ -2.04
Vps28Q9D1C8 Gm3788-201ENSMUST00000119949 136 ntBASIC2.3□□□□□ -2.04
Vps28Q9D1C8 Gm14574-201ENSMUST00000120644 279 ntBASIC2.3□□□□□ -2.04
Vps28Q9D1C8 Gm25982-201ENSMUST00000157920 101 ntBASIC2.3□□□□□ -2.04
Vps28Q9D1C8 Gm24192-201ENSMUST00000157978 145 ntBASIC2.3□□□□□ -2.04
Vps28Q9D1C8 Gm25642-201ENSMUST00000175137 66 ntBASIC2.3□□□□□ -2.04
Vps28Q9D1C8 Mir5118-201ENSMUST00000175551 67 ntBASIC2.3□□□□□ -2.04
Vps28Q9D1C8 Gm37377-201ENSMUST00000191733 304 ntBASIC2.3□□□□□ -2.04
Vps28Q9D1C8 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC2.3□□□□□ -2.04
Vps28Q9D1C8 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Vps28Q9D1C8 AC122905.2-201ENSMUST00000220325 269 ntBASIC2.3□□□□□ -2.04
Vps28Q9D1C8 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC2.3□□□□□ -2.04
Vps28Q9D1C8 Gm23731-201ENSMUST00000083749 107 ntBASIC2.3□□□□□ -2.04
Vps28Q9D1C8 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Vps28Q9D1C8 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
Vps28Q9D1C8 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Vps28Q9D1C8 Gm13432-201ENSMUST00000118861 241 ntBASIC2.29□□□□□ -2.04
Vps28Q9D1C8 Gm12956-201ENSMUST00000122184 414 ntBASIC2.29□□□□□ -2.04
Vps28Q9D1C8 Gm24896-201ENSMUST00000122741 135 ntBASIC2.29□□□□□ -2.04
Vps28Q9D1C8 Gm25434-201ENSMUST00000158278 167 ntBASIC2.29□□□□□ -2.04
Vps28Q9D1C8 Gm24769-201ENSMUST00000158506 129 ntBASIC2.29□□□□□ -2.04
Vps28Q9D1C8 Gm25368-201ENSMUST00000158847 131 ntBASIC2.29□□□□□ -2.04
Vps28Q9D1C8 Gm28995-201ENSMUST00000186625 261 ntBASIC2.29□□□□□ -2.04
Vps28Q9D1C8 AC125311.1-201ENSMUST00000226950 220 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 136.9 ms