Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm23867-201ENSMUST00000122649 274 ntBASIC2.99□□□□□ -1.93
Ddx56Q9D0R4 Gm23474-201ENSMUST00000158884 75 ntBASIC2.99□□□□□ -1.93
Ddx56Q9D0R4 Gm24573-201ENSMUST00000175499 112 ntBASIC2.99□□□□□ -1.93
Ddx56Q9D0R4 Snord93-201ENSMUST00000175580 71 ntBASIC2.99□□□□□ -1.93
Ddx56Q9D0R4 Gm25253-201ENSMUST00000179958 107 ntBASIC2.99□□□□□ -1.93
Ddx56Q9D0R4 Mir6405-201ENSMUST00000184584 124 ntBASIC2.99□□□□□ -1.93
Ddx56Q9D0R4 Gm43676-201ENSMUST00000197532 540 ntBASIC2.99□□□□□ -1.93
Ddx56Q9D0R4 Gm43035-201ENSMUST00000197626 517 ntBASIC2.99□□□□□ -1.93
Ddx56Q9D0R4 Gm44555-201ENSMUST00000209008 148 ntBASIC2.99□□□□□ -1.93
Ddx56Q9D0R4 Gm25078-201ENSMUST00000082530 107 ntBASIC2.99□□□□□ -1.93
Ddx56Q9D0R4 Gm23297-201ENSMUST00000083184 127 ntBASIC2.99□□□□□ -1.93
Ddx56Q9D0R4 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC2.99□□□□□ -1.93
Ddx56Q9D0R4 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Ddx56Q9D0R4 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Ddx56Q9D0R4 Gm24127-201ENSMUST00000104110 130 ntBASIC2.98□□□□□ -1.93
Ddx56Q9D0R4 Gm23911-201ENSMUST00000104596 134 ntBASIC2.98□□□□□ -1.93
Ddx56Q9D0R4 Gm13725-201ENSMUST00000122139 207 ntBASIC2.98□□□□□ -1.93
Ddx56Q9D0R4 Gm25945-201ENSMUST00000122484 135 ntBASIC2.98□□□□□ -1.93
Ddx56Q9D0R4 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC2.98□□□□□ -1.93
Ddx56Q9D0R4 Gm24138-201ENSMUST00000157572 114 ntBASIC2.98□□□□□ -1.93
Ddx56Q9D0R4 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC2.98□□□□□ -1.93
Ddx56Q9D0R4 Gm24818-201ENSMUST00000175093 161 ntBASIC2.98□□□□□ -1.93
Ddx56Q9D0R4 Mir6386-201ENSMUST00000183558 104 ntBASIC2.98□□□□□ -1.93
Ddx56Q9D0R4 Gm27527-201ENSMUST00000183903 99 ntBASIC2.98□□□□□ -1.93
Ddx56Q9D0R4 Mir7658-201ENSMUST00000184043 57 ntBASIC2.98□□□□□ -1.93
Ddx56Q9D0R4 Gm27760-201ENSMUST00000185048 114 ntBASIC2.98□□□□□ -1.93
Ddx56Q9D0R4 Mir6376-201ENSMUST00000185149 131 ntBASIC2.98□□□□□ -1.93
Ddx56Q9D0R4 Gm20923-201ENSMUST00000190009 319 ntBASIC2.98□□□□□ -1.93
Ddx56Q9D0R4 Gm21088-201ENSMUST00000190875 316 ntBASIC2.98□□□□□ -1.93
Ddx56Q9D0R4 Gm37104-201ENSMUST00000193278 196 ntBASIC2.98□□□□□ -1.93
Ddx56Q9D0R4 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.98□□□□□ -1.93
Ddx56Q9D0R4 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Ddx56Q9D0R4 Gm23055-201ENSMUST00000082805 94 ntBASIC2.98□□□□□ -1.93
Ddx56Q9D0R4 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.98□□□□□ -1.93
Ddx56Q9D0R4 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Ddx56Q9D0R4 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Ddx56Q9D0R4 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.97□□□□□ -1.93
Ddx56Q9D0R4 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.97□□□□□ -1.93
Ddx56Q9D0R4 Gm23013-201ENSMUST00000104146 106 ntBASIC2.97□□□□□ -1.93
Ddx56Q9D0R4 Gm22023-201ENSMUST00000104354 130 ntBASIC2.97□□□□□ -1.93
Ddx56Q9D0R4 Gm6829-201ENSMUST00000119858 360 ntBASIC2.97□□□□□ -1.93
Ddx56Q9D0R4 Gm14782-201ENSMUST00000120151 195 ntBASIC2.97□□□□□ -1.93
Ddx56Q9D0R4 Gm24896-201ENSMUST00000122741 135 ntBASIC2.97□□□□□ -1.93
Ddx56Q9D0R4 Gm24443-201ENSMUST00000157242 132 ntBASIC2.97□□□□□ -1.93
Ddx56Q9D0R4 Gm25653-201ENSMUST00000158473 138 ntBASIC2.97□□□□□ -1.93
Ddx56Q9D0R4 Gm24225-201ENSMUST00000158825 98 ntBASIC2.97□□□□□ -1.93
Ddx56Q9D0R4 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC2.97□□□□□ -1.93
Ddx56Q9D0R4 Gm22858-201ENSMUST00000174972 76 ntBASIC2.97□□□□□ -1.93
Ddx56Q9D0R4 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.97□□□□□ -1.93
Ddx56Q9D0R4 Gm29452-201ENSMUST00000187996 313 ntBASIC2.97□□□□□ -1.93
Ddx56Q9D0R4 Gm28849-201ENSMUST00000188127 174 ntBASIC2.97□□□□□ -1.93
Ddx56Q9D0R4 Gm28330-201ENSMUST00000190353 171 ntBASIC2.97□□□□□ -1.93
Ddx56Q9D0R4 Gm42807-201ENSMUST00000200141 329 ntBASIC2.97□□□□□ -1.93
Ddx56Q9D0R4 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.97□□□□□ -1.93
Ddx56Q9D0R4 Gm45791-201ENSMUST00000212908 352 ntBASIC2.97□□□□□ -1.93
Ddx56Q9D0R4 AC144783.2-201ENSMUST00000219089 195 ntBASIC2.97□□□□□ -1.93
Ddx56Q9D0R4 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.97□□□□□ -1.93
Ddx56Q9D0R4 Mir29c-201ENSMUST00000083614 88 ntBASIC2.97□□□□□ -1.93
Ddx56Q9D0R4 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.97□□□□□ -1.93
Ddx56Q9D0R4 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.96□□□□□ -1.93
Ddx56Q9D0R4 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Ddx56Q9D0R4 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Ddx56Q9D0R4 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.96□□□□□ -1.94
Ddx56Q9D0R4 Gm25961-201ENSMUST00000157174 135 ntBASIC2.96□□□□□ -1.94
Ddx56Q9D0R4 Gm23579-201ENSMUST00000158528 103 ntBASIC2.96□□□□□ -1.94
Ddx56Q9D0R4 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Ddx56Q9D0R4 Mir8103-201ENSMUST00000183945 107 ntBASIC2.96□□□□□ -1.94
Ddx56Q9D0R4 Gm26265-202ENSMUST00000196326 133 ntBASIC2.96□□□□□ -1.94
Ddx56Q9D0R4 Mir1291-201ENSMUST00000199842 117 ntBASIC2.96□□□□□ -1.94
Ddx56Q9D0R4 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC2.96□□□□□ -1.94
Ddx56Q9D0R4 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.96□□□□□ -1.94
Ddx56Q9D0R4 Gm6109-201ENSMUST00000223297 348 ntBASIC2.96□□□□□ -1.94
Ddx56Q9D0R4 Gm22294-201ENSMUST00000083308 104 ntBASIC2.96□□□□□ -1.94
Ddx56Q9D0R4 Gm23249-201ENSMUST00000083369 161 ntBASIC2.96□□□□□ -1.94
Ddx56Q9D0R4 Snora34-201ENSMUST00000083402 138 ntBASIC2.96□□□□□ -1.94
Ddx56Q9D0R4 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Ddx56Q9D0R4 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Ddx56Q9D0R4 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.95□□□□□ -1.94
Ddx56Q9D0R4 Gm24049-201ENSMUST00000102409 100 ntBASIC2.95□□□□□ -1.94
Ddx56Q9D0R4 Gm26249-201ENSMUST00000116708 118 ntBASIC2.95□□□□□ -1.94
Ddx56Q9D0R4 Gm13967-201ENSMUST00000120404 380 ntBASIC2.95□□□□□ -1.94
Ddx56Q9D0R4 Gm14845-201ENSMUST00000121259 306 ntBASIC2.95□□□□□ -1.94
Ddx56Q9D0R4 Gm25748-201ENSMUST00000175487 70 ntBASIC2.95□□□□□ -1.94
Ddx56Q9D0R4 Gm20613-201ENSMUST00000175828 345 ntBASIC2.95□□□□□ -1.94
Ddx56Q9D0R4 Gm17067-202ENSMUST00000180131 123 ntBASIC2.95□□□□□ -1.94
Ddx56Q9D0R4 Gm27991-201ENSMUST00000184804 137 ntBASIC2.95□□□□□ -1.94
Ddx56Q9D0R4 Gm19901-201ENSMUST00000192191 495 ntBASIC2.95□□□□□ -1.94
Ddx56Q9D0R4 Gm42594-201ENSMUST00000199511 246 ntBASIC2.95□□□□□ -1.94
Ddx56Q9D0R4 AC154552.1-201ENSMUST00000222969 202 ntBASIC2.95□□□□□ -1.94
Ddx56Q9D0R4 AC122834.1-201ENSMUST00000227182 425 ntBASIC2.95□□□□□ -1.94
Ddx56Q9D0R4 Gm25124-201ENSMUST00000083345 164 ntBASIC2.95□□□□□ -1.94
Ddx56Q9D0R4 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Ddx56Q9D0R4 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.95□□□□□ -1.94
Ddx56Q9D0R4 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Ddx56Q9D0R4 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.94□□□□□ -1.94
Ddx56Q9D0R4 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Ddx56Q9D0R4 Gm16171-201ENSMUST00000118004 324 ntBASIC2.94□□□□□ -1.94
Ddx56Q9D0R4 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Ddx56Q9D0R4 Gm23895-201ENSMUST00000158108 160 ntBASIC2.94□□□□□ -1.94
Ddx56Q9D0R4 Gm17166-201ENSMUST00000172006 431 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms