Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm24414-201ENSMUST00000083434 107 ntBASIC2.09□□□□□ -2.07
Smc1aQ9CU62 Gm24861-201ENSMUST00000083459 107 ntBASIC2.09□□□□□ -2.07
Smc1aQ9CU62 Gm24803-201ENSMUST00000083693 107 ntBASIC2.09□□□□□ -2.07
Smc1aQ9CU62 Gm23103-201ENSMUST00000083725 107 ntBASIC2.09□□□□□ -2.07
Smc1aQ9CU62 Gm22580-201ENSMUST00000083727 107 ntBASIC2.09□□□□□ -2.07
Smc1aQ9CU62 Gm24260-201ENSMUST00000083741 107 ntBASIC2.09□□□□□ -2.07
Smc1aQ9CU62 Gm23732-201ENSMUST00000083751 107 ntBASIC2.09□□□□□ -2.07
Smc1aQ9CU62 Gm22682-201ENSMUST00000083854 107 ntBASIC2.09□□□□□ -2.07
Smc1aQ9CU62 Gm25869-201ENSMUST00000083855 107 ntBASIC2.09□□□□□ -2.07
Smc1aQ9CU62 Gm24693-201ENSMUST00000083885 107 ntBASIC2.09□□□□□ -2.07
Smc1aQ9CU62 Gm26317-201ENSMUST00000083894 107 ntBASIC2.09□□□□□ -2.07
Smc1aQ9CU62 Gm22352-201ENSMUST00000083917 107 ntBASIC2.09□□□□□ -2.07
Smc1aQ9CU62 Gm24448-201ENSMUST00000083979 107 ntBASIC2.09□□□□□ -2.07
Smc1aQ9CU62 Gm22798-201ENSMUST00000083992 107 ntBASIC2.09□□□□□ -2.07
Smc1aQ9CU62 Gm26427-201ENSMUST00000093648 107 ntBASIC2.09□□□□□ -2.07
Smc1aQ9CU62 Gm22886-201ENSMUST00000093714 107 ntBASIC2.09□□□□□ -2.07
Smc1aQ9CU62 Gm22170-201ENSMUST00000097247 107 ntBASIC2.09□□□□□ -2.07
Smc1aQ9CU62 Gm14797-201ENSMUST00000119378 1480 ntBASIC2.08□□□□□ -2.08
Smc1aQ9CU62 Gm12255-201ENSMUST00000117184 284 ntBASIC2.08□□□□□ -2.08
Smc1aQ9CU62 Gm22556-201ENSMUST00000157803 100 ntBASIC2.08□□□□□ -2.08
Smc1aQ9CU62 Gm27511-201ENSMUST00000183502 127 ntBASIC2.08□□□□□ -2.08
Smc1aQ9CU62 Mir6352-201ENSMUST00000184495 116 ntBASIC2.08□□□□□ -2.08
Smc1aQ9CU62 Gm27979-201ENSMUST00000185126 56 ntBASIC2.08□□□□□ -2.08
Smc1aQ9CU62 Gm29134-201ENSMUST00000186579 126 ntBASIC2.08□□□□□ -2.08
Smc1aQ9CU62 Gm29352-201ENSMUST00000188054 544 ntBASIC2.08□□□□□ -2.08
Smc1aQ9CU62 Gm28337-201ENSMUST00000190425 666 ntBASIC2.08□□□□□ -2.08
Smc1aQ9CU62 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Smc1aQ9CU62 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC2.08□□□□□ -2.08
Smc1aQ9CU62 Gm9402-201ENSMUST00000196849 388 ntBASIC2.08□□□□□ -2.08
Smc1aQ9CU62 Gm44726-201ENSMUST00000203427 217 ntBASIC2.08□□□□□ -2.08
Smc1aQ9CU62 Gm44666-201ENSMUST00000208544 391 ntBASIC2.08□□□□□ -2.08
Smc1aQ9CU62 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC2.08□□□□□ -2.08
Smc1aQ9CU62 AC153864.2-201ENSMUST00000220424 292 ntBASIC2.08□□□□□ -2.08
Smc1aQ9CU62 Gm46312-201ENSMUST00000220961 420 ntBASIC2.08□□□□□ -2.08
Smc1aQ9CU62 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.08□□□□□ -2.08
Smc1aQ9CU62 Gm23614-201ENSMUST00000082598 107 ntBASIC2.08□□□□□ -2.08
Smc1aQ9CU62 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.08□□□□□ -2.08
Smc1aQ9CU62 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Smc1aQ9CU62 Gm13475-201ENSMUST00000119290 234 ntBASIC2.07□□□□□ -2.08
Smc1aQ9CU62 Gm15030-201ENSMUST00000119804 484 ntBASIC2.07□□□□□ -2.08
Smc1aQ9CU62 Gm11359-201ENSMUST00000120039 567 ntBASIC2.07□□□□□ -2.08
Smc1aQ9CU62 Gm22843-201ENSMUST00000157710 134 ntBASIC2.07□□□□□ -2.08
Smc1aQ9CU62 Gm23641-201ENSMUST00000157857 101 ntBASIC2.07□□□□□ -2.08
Smc1aQ9CU62 Gm25162-201ENSMUST00000158906 159 ntBASIC2.07□□□□□ -2.08
Smc1aQ9CU62 Gm7925-201ENSMUST00000166690 401 ntBASIC2.07□□□□□ -2.08
Smc1aQ9CU62 Gm7953-201ENSMUST00000168278 469 ntBASIC2.07□□□□□ -2.08
Smc1aQ9CU62 Gm26430-201ENSMUST00000178054 107 ntBASIC2.07□□□□□ -2.08
Smc1aQ9CU62 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Smc1aQ9CU62 Gm9892-201ENSMUST00000182415 992 ntBASIC2.07□□□□□ -2.08
Smc1aQ9CU62 Gm27317-201ENSMUST00000183533 95 ntBASIC2.07□□□□□ -2.08
Smc1aQ9CU62 Gm18971-201ENSMUST00000197240 374 ntBASIC2.07□□□□□ -2.08
Smc1aQ9CU62 Mir3087-201ENSMUST00000199405 56 ntBASIC2.07□□□□□ -2.08
Smc1aQ9CU62 Gm44446-201ENSMUST00000204864 255 ntBASIC2.07□□□□□ -2.08
Smc1aQ9CU62 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC2.07□□□□□ -2.08
Smc1aQ9CU62 AC163357.1-201ENSMUST00000220847 233 ntBASIC2.07□□□□□ -2.08
Smc1aQ9CU62 AC124772.1-201ENSMUST00000221325 151 ntBASIC2.07□□□□□ -2.08
Smc1aQ9CU62 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC2.07□□□□□ -2.08
Smc1aQ9CU62 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC2.07□□□□□ -2.08
Smc1aQ9CU62 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC2.07□□□□□ -2.08
Smc1aQ9CU62 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
Smc1aQ9CU62 Gm26149-201ENSMUST00000157432 108 ntBASIC2.06□□□□□ -2.08
Smc1aQ9CU62 Gm22551-201ENSMUST00000157795 103 ntBASIC2.06□□□□□ -2.08
Smc1aQ9CU62 Gm24577-201ENSMUST00000158580 63 ntBASIC2.06□□□□□ -2.08
Smc1aQ9CU62 Gm22136-201ENSMUST00000158751 268 ntBASIC2.06□□□□□ -2.08
Smc1aQ9CU62 Gm27013-201ENSMUST00000182441 1024 ntBASIC2.06□□□□□ -2.08
Smc1aQ9CU62 Mir6399-201ENSMUST00000184050 84 ntBASIC2.06□□□□□ -2.08
Smc1aQ9CU62 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC2.06□□□□□ -2.08
Smc1aQ9CU62 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Smc1aQ9CU62 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC2.06□□□□□ -2.08
Smc1aQ9CU62 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC2.06□□□□□ -2.08
Smc1aQ9CU62 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.06□□□□□ -2.08
Smc1aQ9CU62 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.06□□□□□ -2.08
Smc1aQ9CU62 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
Smc1aQ9CU62 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Smc1aQ9CU62 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.05□□□□□ -2.08
Smc1aQ9CU62 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Smc1aQ9CU62 Gm25090-201ENSMUST00000104000 132 ntBASIC2.05□□□□□ -2.08
Smc1aQ9CU62 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC2.05□□□□□ -2.08
Smc1aQ9CU62 Gm14402-201ENSMUST00000122217 508 ntBASIC2.05□□□□□ -2.08
Smc1aQ9CU62 Gm27510-201ENSMUST00000158214 64 ntBASIC2.05□□□□□ -2.08
Smc1aQ9CU62 Gm26024-201ENSMUST00000158657 322 ntBASIC2.05□□□□□ -2.08
Smc1aQ9CU62 Gm17148-201ENSMUST00000164702 249 ntBASIC2.05□□□□□ -2.08
Smc1aQ9CU62 Gm24333-201ENSMUST00000175101 84 ntBASIC2.05□□□□□ -2.08
Smc1aQ9CU62 Gm21754-201ENSMUST00000177550 479 ntBASIC2.05□□□□□ -2.08
Smc1aQ9CU62 Gm24638-201ENSMUST00000179807 132 ntBASIC2.05□□□□□ -2.08
Smc1aQ9CU62 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC2.05□□□□□ -2.08
Smc1aQ9CU62 Gm29657-201ENSMUST00000189807 342 ntBASIC2.05□□□□□ -2.08
Smc1aQ9CU62 Gm43676-201ENSMUST00000197532 540 ntBASIC2.05□□□□□ -2.08
Smc1aQ9CU62 Gm44465-201ENSMUST00000199536 114 ntBASIC2.05□□□□□ -2.08
Smc1aQ9CU62 AC165293.1-201ENSMUST00000219669 329 ntBASIC2.05□□□□□ -2.08
Smc1aQ9CU62 AC157017.1-201ENSMUST00000220148 364 ntBASIC2.05□□□□□ -2.08
Smc1aQ9CU62 Gm26175-201ENSMUST00000083794 131 ntBASIC2.05□□□□□ -2.08
Smc1aQ9CU62 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC2.05□□□□□ -2.08
Smc1aQ9CU62 Gm16242-201ENSMUST00000117741 334 ntBASIC2.04□□□□□ -2.08
Smc1aQ9CU62 Gm14624-201ENSMUST00000117746 192 ntBASIC2.04□□□□□ -2.08
Smc1aQ9CU62 Gm14709-201ENSMUST00000121225 304 ntBASIC2.04□□□□□ -2.08
Smc1aQ9CU62 Gm23331-201ENSMUST00000157423 108 ntBASIC2.04□□□□□ -2.08
Smc1aQ9CU62 Gm24419-201ENSMUST00000157875 332 ntBASIC2.04□□□□□ -2.08
Smc1aQ9CU62 Gm24409-201ENSMUST00000157881 152 ntBASIC2.04□□□□□ -2.08
Smc1aQ9CU62 Gm24076-201ENSMUST00000158179 94 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms