Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC2.02□□□□□ -2.09
Ccdc43Q9CR29 Gm44387-201ENSMUST00000196298 145 ntBASIC2.02□□□□□ -2.09
Ccdc43Q9CR29 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC2.02□□□□□ -2.09
Ccdc43Q9CR29 Gm18453-201ENSMUST00000208000 626 ntBASIC2.02□□□□□ -2.09
Ccdc43Q9CR29 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Ccdc43Q9CR29 Gm26066-201ENSMUST00000083385 109 ntBASIC2.02□□□□□ -2.09
Ccdc43Q9CR29 Mir322-201ENSMUST00000083484 95 ntBASIC2.02□□□□□ -2.09
Ccdc43Q9CR29 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.01□□□□□ -2.09
Ccdc43Q9CR29 Gm14678-201ENSMUST00000121396 482 ntBASIC2.01□□□□□ -2.09
Ccdc43Q9CR29 Gm22308-201ENSMUST00000177609 107 ntBASIC2.01□□□□□ -2.09
Ccdc43Q9CR29 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Ccdc43Q9CR29 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC2.01□□□□□ -2.09
Ccdc43Q9CR29 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.01□□□□□ -2.09
Ccdc43Q9CR29 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC2.01□□□□□ -2.09
Ccdc43Q9CR29 AC120394.1-201ENSMUST00000217153 351 ntBASIC2.01□□□□□ -2.09
Ccdc43Q9CR29 Gm24805-201ENSMUST00000082931 104 ntBASIC2.01□□□□□ -2.09
Ccdc43Q9CR29 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC2.01□□□□□ -2.09
Ccdc43Q9CR29 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.01□□□□□ -2.09
Ccdc43Q9CR29 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC2.01□□□□□ -2.09
Ccdc43Q9CR29 Gm25421-201ENSMUST00000104218 164 ntBASIC2□□□□□ -2.09
Ccdc43Q9CR29 Gm14674-201ENSMUST00000117816 342 ntBASIC2□□□□□ -2.09
Ccdc43Q9CR29 Gm22227-201ENSMUST00000157356 259 ntBASIC2□□□□□ -2.09
Ccdc43Q9CR29 Gm24783-201ENSMUST00000157639 100 ntBASIC2□□□□□ -2.09
Ccdc43Q9CR29 Gm23120-201ENSMUST00000157654 287 ntBASIC2□□□□□ -2.09
Ccdc43Q9CR29 Gm22666-201ENSMUST00000158717 164 ntBASIC2□□□□□ -2.09
Ccdc43Q9CR29 Mir6997-201ENSMUST00000184313 71 ntBASIC2□□□□□ -2.09
Ccdc43Q9CR29 Gm29657-201ENSMUST00000189807 342 ntBASIC2□□□□□ -2.09
Ccdc43Q9CR29 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC2□□□□□ -2.09
Ccdc43Q9CR29 Gm44429-201ENSMUST00000203542 186 ntBASIC2□□□□□ -2.09
Ccdc43Q9CR29 Gm44844-201ENSMUST00000207242 336 ntBASIC2□□□□□ -2.09
Ccdc43Q9CR29 Gm44655-201ENSMUST00000207768 423 ntBASIC2□□□□□ -2.09
Ccdc43Q9CR29 AC114916.1-201ENSMUST00000228465 494 ntBASIC2□□□□□ -2.09
Ccdc43Q9CR29 Ear14-201ENSMUST00000049559 468 ntBASIC2□□□□□ -2.09
Ccdc43Q9CR29 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC2□□□□□ -2.09
Ccdc43Q9CR29 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Ccdc43Q9CR29 Gm24079-201ENSMUST00000104352 132 ntBASIC1.99□□□□□ -2.09
Ccdc43Q9CR29 Gm20477-201ENSMUST00000174028 280 ntBASIC1.99□□□□□ -2.09
Ccdc43Q9CR29 Gm24656-201ENSMUST00000177548 132 ntBASIC1.99□□□□□ -2.09
Ccdc43Q9CR29 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Ccdc43Q9CR29 Mir6995-201ENSMUST00000183658 71 ntBASIC1.99□□□□□ -2.09
Ccdc43Q9CR29 Mir669d-201ENSMUST00000104644 121 ntBASIC1.98□□□□□ -2.09
Ccdc43Q9CR29 Mir873a-201ENSMUST00000104863 77 ntBASIC1.98□□□□□ -2.09
Ccdc43Q9CR29 Gm11891-201ENSMUST00000121241 619 ntBASIC1.98□□□□□ -2.09
Ccdc43Q9CR29 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC1.98□□□□□ -2.09
Ccdc43Q9CR29 Mir6379-201ENSMUST00000183392 115 ntBASIC1.98□□□□□ -2.09
Ccdc43Q9CR29 Gm27959-201ENSMUST00000185172 111 ntBASIC1.98□□□□□ -2.09
Ccdc43Q9CR29 Gm18546-201ENSMUST00000197245 676 ntBASIC1.98□□□□□ -2.09
Ccdc43Q9CR29 Gm43245-201ENSMUST00000197603 468 ntBASIC1.98□□□□□ -2.09
Ccdc43Q9CR29 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC1.98□□□□□ -2.09
Ccdc43Q9CR29 AC116589.1-201ENSMUST00000220634 327 ntBASIC1.98□□□□□ -2.09
Ccdc43Q9CR29 AC129208.2-201ENSMUST00000228506 320 ntBASIC1.98□□□□□ -2.09
Ccdc43Q9CR29 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Ccdc43Q9CR29 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Ccdc43Q9CR29 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.97□□□□□ -2.09
Ccdc43Q9CR29 Gm14392-201ENSMUST00000120332 401 ntBASIC1.97□□□□□ -2.09
Ccdc43Q9CR29 Gm14413-201ENSMUST00000122158 408 ntBASIC1.97□□□□□ -2.09
Ccdc43Q9CR29 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.97□□□□□ -2.09
Ccdc43Q9CR29 Gm24572-201ENSMUST00000175505 88 ntBASIC1.97□□□□□ -2.09
Ccdc43Q9CR29 Mir7683-201ENSMUST00000183842 61 ntBASIC1.97□□□□□ -2.09
Ccdc43Q9CR29 Gm28343-201ENSMUST00000185386 112 ntBASIC1.97□□□□□ -2.09
Ccdc43Q9CR29 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC1.97□□□□□ -2.09
Ccdc43Q9CR29 Gm37778-201ENSMUST00000191732 190 ntBASIC1.97□□□□□ -2.09
Ccdc43Q9CR29 Ighv1-46-201ENSMUST00000193988 351 ntBASIC1.97□□□□□ -2.09
Ccdc43Q9CR29 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Ccdc43Q9CR29 Mir1291-201ENSMUST00000199842 117 ntBASIC1.97□□□□□ -2.09
Ccdc43Q9CR29 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.97□□□□□ -2.09
Ccdc43Q9CR29 AC164297.3-201ENSMUST00000224238 94 ntBASIC1.97□□□□□ -2.09
Ccdc43Q9CR29 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.97□□□□□ -2.09
Ccdc43Q9CR29 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Ccdc43Q9CR29 Gm22683-201ENSMUST00000082854 137 ntBASIC1.97□□□□□ -2.09
Ccdc43Q9CR29 Snora34-201ENSMUST00000083402 138 ntBASIC1.97□□□□□ -2.09
Ccdc43Q9CR29 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Ccdc43Q9CR29 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC1.96□□□□□ -2.1
Ccdc43Q9CR29 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.96□□□□□ -2.1
Ccdc43Q9CR29 Gm20438-201ENSMUST00000174441 329 ntBASIC1.96□□□□□ -2.1
Ccdc43Q9CR29 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.96□□□□□ -2.1
Ccdc43Q9CR29 Gm25121-201ENSMUST00000179846 79 ntBASIC1.96□□□□□ -2.1
Ccdc43Q9CR29 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.96□□□□□ -2.1
Ccdc43Q9CR29 Gm44384-201ENSMUST00000200208 114 ntBASIC1.96□□□□□ -2.1
Ccdc43Q9CR29 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.96□□□□□ -2.1
Ccdc43Q9CR29 AC130821.1-201ENSMUST00000221997 293 ntBASIC1.96□□□□□ -2.1
Ccdc43Q9CR29 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.96□□□□□ -2.1
Ccdc43Q9CR29 AC183092.2-201ENSMUST00000225542 1153 ntBASIC1.96□□□□□ -2.1
Ccdc43Q9CR29 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.96□□□□□ -2.1
Ccdc43Q9CR29 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Ccdc43Q9CR29 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.95□□□□□ -2.1
Ccdc43Q9CR29 Mir701-201ENSMUST00000102208 109 ntBASIC1.95□□□□□ -2.1
Ccdc43Q9CR29 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC1.95□□□□□ -2.1
Ccdc43Q9CR29 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC1.95□□□□□ -2.1
Ccdc43Q9CR29 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC1.95□□□□□ -2.1
Ccdc43Q9CR29 Mir3096-201ENSMUST00000116685 71 ntBASIC1.95□□□□□ -2.1
Ccdc43Q9CR29 Gm24393-201ENSMUST00000158135 97 ntBASIC1.95□□□□□ -2.1
Ccdc43Q9CR29 Gm23090-201ENSMUST00000177331 78 ntBASIC1.95□□□□□ -2.1
Ccdc43Q9CR29 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.95□□□□□ -2.1
Ccdc43Q9CR29 Mir7021-201ENSMUST00000197026 63 ntBASIC1.95□□□□□ -2.1
Ccdc43Q9CR29 Gm45754-201ENSMUST00000212380 279 ntBASIC1.95□□□□□ -2.1
Ccdc43Q9CR29 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.95□□□□□ -2.1
Ccdc43Q9CR29 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Ccdc43Q9CR29 Gm24977-201ENSMUST00000083106 163 ntBASIC1.95□□□□□ -2.1
Ccdc43Q9CR29 Gm22843-201ENSMUST00000157710 134 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms