Protein–RNA interactions for Protein: Q9CR26

Vta1, Vacuolar protein sorting-associated protein VTA1 homolog, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vta1Q9CR26 Gm29397-201ENSMUST00000185205 333 ntBASIC2.62□□□□□ -1.99
Vta1Q9CR26 Gm28661-201ENSMUST00000188231 681 ntBASIC2.62□□□□□ -1.99
Vta1Q9CR26 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.62□□□□□ -1.99
Vta1Q9CR26 Gm25628-201ENSMUST00000084002 105 ntBASIC2.62□□□□□ -1.99
Vta1Q9CR26 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.62□□□□□ -1.99
Vta1Q9CR26 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.62□□□□□ -1.99
Vta1Q9CR26 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.62□□□□□ -1.99
Vta1Q9CR26 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC2.61□□□□□ -1.99
Vta1Q9CR26 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
Vta1Q9CR26 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.61□□□□□ -1.99
Vta1Q9CR26 Gm13378-201ENSMUST00000117483 336 ntBASIC2.61□□□□□ -1.99
Vta1Q9CR26 Gm6956-201ENSMUST00000134724 546 ntBASIC2.61□□□□□ -1.99
Vta1Q9CR26 Gm23223-201ENSMUST00000158119 127 ntBASIC2.61□□□□□ -1.99
Vta1Q9CR26 Gm22192-201ENSMUST00000175128 85 ntBASIC2.61□□□□□ -1.99
Vta1Q9CR26 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC2.61□□□□□ -1.99
Vta1Q9CR26 Gm29229-201ENSMUST00000188874 323 ntBASIC2.61□□□□□ -1.99
Vta1Q9CR26 Gm44429-201ENSMUST00000203542 186 ntBASIC2.61□□□□□ -1.99
Vta1Q9CR26 Gm7240-201ENSMUST00000220769 664 ntBASIC2.61□□□□□ -1.99
Vta1Q9CR26 AC166341.3-201ENSMUST00000221861 114 ntBASIC2.61□□□□□ -1.99
Vta1Q9CR26 Gm25632-201ENSMUST00000083112 85 ntBASIC2.61□□□□□ -1.99
Vta1Q9CR26 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Vta1Q9CR26 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
Vta1Q9CR26 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.6□□□□□ -1.99
Vta1Q9CR26 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.6□□□□□ -1.99
Vta1Q9CR26 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Vta1Q9CR26 Gm14624-201ENSMUST00000117746 192 ntBASIC2.6□□□□□ -1.99
Vta1Q9CR26 Gm26255-201ENSMUST00000122492 103 ntBASIC2.6□□□□□ -1.99
Vta1Q9CR26 Gm22598-201ENSMUST00000157600 127 ntBASIC2.6□□□□□ -1.99
Vta1Q9CR26 Gm23548-201ENSMUST00000158963 106 ntBASIC2.6□□□□□ -1.99
Vta1Q9CR26 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Vta1Q9CR26 Gm24304-201ENSMUST00000177635 107 ntBASIC2.6□□□□□ -1.99
Vta1Q9CR26 Gm25284-201ENSMUST00000180345 141 ntBASIC2.6□□□□□ -1.99
Vta1Q9CR26 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.6□□□□□ -1.99
Vta1Q9CR26 Gm28744-201ENSMUST00000189939 340 ntBASIC2.6□□□□□ -1.99
Vta1Q9CR26 Gm28848-201ENSMUST00000189984 168 ntBASIC2.6□□□□□ -1.99
Vta1Q9CR26 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC2.6□□□□□ -1.99
Vta1Q9CR26 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.6□□□□□ -1.99
Vta1Q9CR26 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Vta1Q9CR26 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.6□□□□□ -1.99
Vta1Q9CR26 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.6□□□□□ -1.99
Vta1Q9CR26 Gm26077-201ENSMUST00000104064 123 ntBASIC2.59□□□□□ -1.99
Vta1Q9CR26 Mir669d-2-201ENSMUST00000116854 86 ntBASIC2.59□□□□□ -1.99
Vta1Q9CR26 Gm22678-201ENSMUST00000116974 101 ntBASIC2.59□□□□□ -1.99
Vta1Q9CR26 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.59□□□□□ -1.99
Vta1Q9CR26 Gm5396-201ENSMUST00000121222 532 ntBASIC2.59□□□□□ -1.99
Vta1Q9CR26 Gm24724-201ENSMUST00000158230 107 ntBASIC2.59□□□□□ -1.99
Vta1Q9CR26 Gm24499-201ENSMUST00000158446 104 ntBASIC2.59□□□□□ -1.99
Vta1Q9CR26 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.59□□□□□ -1.99
Vta1Q9CR26 Gm16561-201ENSMUST00000163001 192 ntBASIC2.59□□□□□ -1.99
Vta1Q9CR26 Gm32033-201ENSMUST00000193483 339 ntBASIC2.59□□□□□ -1.99
Vta1Q9CR26 Trbv6-201ENSMUST00000193743 276 ntBASIC2.59□□□□□ -1.99
Vta1Q9CR26 AC147240.1-201ENSMUST00000218767 431 ntBASIC2.59□□□□□ -1.99
Vta1Q9CR26 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.59□□□□□ -1.99
Vta1Q9CR26 mt-Tr-201ENSMUST00000082412 68 ntBASIC2.59□□□□□ -1.99
Vta1Q9CR26 Gm22062-201ENSMUST00000082563 107 ntBASIC2.59□□□□□ -1.99
Vta1Q9CR26 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.59□□□□□ -2
Vta1Q9CR26 Gm23011-201ENSMUST00000104148 132 ntBASIC2.58□□□□□ -2
Vta1Q9CR26 Gm24275-201ENSMUST00000116780 146 ntBASIC2.58□□□□□ -2
Vta1Q9CR26 Gm22316-201ENSMUST00000158012 216 ntBASIC2.58□□□□□ -2
Vta1Q9CR26 Gm26400-201ENSMUST00000175012 85 ntBASIC2.58□□□□□ -2
Vta1Q9CR26 Gm24388-201ENSMUST00000177872 107 ntBASIC2.58□□□□□ -2
Vta1Q9CR26 Mir6406-201ENSMUST00000183592 120 ntBASIC2.58□□□□□ -2
Vta1Q9CR26 Mir6997-201ENSMUST00000184313 71 ntBASIC2.58□□□□□ -2
Vta1Q9CR26 Trbv18-201ENSMUST00000194256 294 ntBASIC2.58□□□□□ -2
Vta1Q9CR26 Gm43505-201ENSMUST00000200579 139 ntBASIC2.58□□□□□ -2
Vta1Q9CR26 Gm45445-201ENSMUST00000209586 232 ntBASIC2.58□□□□□ -2
Vta1Q9CR26 Gm46389-201ENSMUST00000223199 392 ntBASIC2.58□□□□□ -2
Vta1Q9CR26 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
Vta1Q9CR26 Snord104-201ENSMUST00000083192 70 ntBASIC2.58□□□□□ -2
Vta1Q9CR26 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC2.58□□□□□ -2
Vta1Q9CR26 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.58□□□□□ -2
Vta1Q9CR26 Gm42755-201ENSMUST00000198533 1493 ntBASIC2.58□□□□□ -2
Vta1Q9CR26 Snora36b-201ENSMUST00000104383 132 ntBASIC2.57□□□□□ -2
Vta1Q9CR26 Gm13439-201ENSMUST00000117541 409 ntBASIC2.57□□□□□ -2
Vta1Q9CR26 Gm24436-201ENSMUST00000157889 302 ntBASIC2.57□□□□□ -2
Vta1Q9CR26 Gm23033-201ENSMUST00000157996 134 ntBASIC2.57□□□□□ -2
Vta1Q9CR26 Gm24084-201ENSMUST00000175173 137 ntBASIC2.57□□□□□ -2
Vta1Q9CR26 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC2.57□□□□□ -2
Vta1Q9CR26 Gm28016-201ENSMUST00000184594 196 ntBASIC2.57□□□□□ -2
Vta1Q9CR26 Gm34015-201ENSMUST00000194908 451 ntBASIC2.57□□□□□ -2
Vta1Q9CR26 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC2.57□□□□□ -2
Vta1Q9CR26 AC132954.1-201ENSMUST00000221017 342 ntBASIC2.57□□□□□ -2
Vta1Q9CR26 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.57□□□□□ -2
Vta1Q9CR26 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.57□□□□□ -2
Vta1Q9CR26 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.57□□□□□ -2
Vta1Q9CR26 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Vta1Q9CR26 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Vta1Q9CR26 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC2.56□□□□□ -2
Vta1Q9CR26 Gm14670-201ENSMUST00000117327 337 ntBASIC2.56□□□□□ -2
Vta1Q9CR26 Gm11254-201ENSMUST00000122368 653 ntBASIC2.56□□□□□ -2
Vta1Q9CR26 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.56□□□□□ -2
Vta1Q9CR26 Gm23048-201ENSMUST00000157237 129 ntBASIC2.56□□□□□ -2
Vta1Q9CR26 Gm24726-201ENSMUST00000158232 121 ntBASIC2.56□□□□□ -2
Vta1Q9CR26 Gm22159-201ENSMUST00000158412 130 ntBASIC2.56□□□□□ -2
Vta1Q9CR26 Gm22947-201ENSMUST00000158559 91 ntBASIC2.56□□□□□ -2
Vta1Q9CR26 Gm25020-201ENSMUST00000178071 107 ntBASIC2.56□□□□□ -2
Vta1Q9CR26 Gm43512-201ENSMUST00000198495 176 ntBASIC2.56□□□□□ -2
Vta1Q9CR26 Gm44010-201ENSMUST00000204432 331 ntBASIC2.56□□□□□ -2
Vta1Q9CR26 Gm2829-201ENSMUST00000213121 499 ntBASIC2.56□□□□□ -2
Vta1Q9CR26 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 188.2 ms