Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm24623-201ENSMUST00000082616 194 ntBASIC1.21□□□□□ -2.22
RTRAFQ9CQE8 Gm23515-201ENSMUST00000082829 107 ntBASIC1.21□□□□□ -2.22
RTRAFQ9CQE8 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.21□□□□□ -2.22
RTRAFQ9CQE8 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
RTRAFQ9CQE8 Gm17132-201ENSMUST00000109542 1158 ntBASIC1.2□□□□□ -2.22
RTRAFQ9CQE8 Gm13672-201ENSMUST00000117554 459 ntBASIC1.2□□□□□ -2.22
RTRAFQ9CQE8 Gm13720-201ENSMUST00000120741 196 ntBASIC1.2□□□□□ -2.22
RTRAFQ9CQE8 Gm25559-201ENSMUST00000157182 74 ntBASIC1.2□□□□□ -2.22
RTRAFQ9CQE8 Gm25333-201ENSMUST00000158035 246 ntBASIC1.2□□□□□ -2.22
RTRAFQ9CQE8 Gm23858-201ENSMUST00000158384 106 ntBASIC1.2□□□□□ -2.22
RTRAFQ9CQE8 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
RTRAFQ9CQE8 Gm20477-201ENSMUST00000174028 280 ntBASIC1.2□□□□□ -2.22
RTRAFQ9CQE8 Gm18588-201ENSMUST00000177308 492 ntBASIC1.2□□□□□ -2.22
RTRAFQ9CQE8 Gm27919-201ENSMUST00000185163 107 ntBASIC1.2□□□□□ -2.22
RTRAFQ9CQE8 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
RTRAFQ9CQE8 Gm21064-202ENSMUST00000190583 278 ntBASIC1.2□□□□□ -2.22
RTRAFQ9CQE8 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
RTRAFQ9CQE8 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC1.2□□□□□ -2.22
RTRAFQ9CQE8 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
RTRAFQ9CQE8 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC1.2□□□□□ -2.22
RTRAFQ9CQE8 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.2□□□□□ -2.22
RTRAFQ9CQE8 AC124772.1-201ENSMUST00000221325 151 ntBASIC1.2□□□□□ -2.22
RTRAFQ9CQE8 AC183092.2-201ENSMUST00000225542 1153 ntBASIC1.2□□□□□ -2.22
RTRAFQ9CQE8 Gm22683-201ENSMUST00000082854 137 ntBASIC1.2□□□□□ -2.22
RTRAFQ9CQE8 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
RTRAFQ9CQE8 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
RTRAFQ9CQE8 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC1.2□□□□□ -2.22
RTRAFQ9CQE8 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.2□□□□□ -2.22
RTRAFQ9CQE8 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
RTRAFQ9CQE8 Gm11857-201ENSMUST00000119817 324 ntBASIC1.19□□□□□ -2.22
RTRAFQ9CQE8 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
RTRAFQ9CQE8 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC1.19□□□□□ -2.22
RTRAFQ9CQE8 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC1.19□□□□□ -2.22
RTRAFQ9CQE8 Gm26181-201ENSMUST00000157687 106 ntBASIC1.19□□□□□ -2.22
RTRAFQ9CQE8 Gm25384-201ENSMUST00000157807 105 ntBASIC1.19□□□□□ -2.22
RTRAFQ9CQE8 Gm22654-201ENSMUST00000157874 105 ntBASIC1.19□□□□□ -2.22
RTRAFQ9CQE8 Gm23221-201ENSMUST00000158118 93 ntBASIC1.19□□□□□ -2.22
RTRAFQ9CQE8 Gm20656-201ENSMUST00000176925 518 ntBASIC1.19□□□□□ -2.22
RTRAFQ9CQE8 Gm23860-201ENSMUST00000179446 132 ntBASIC1.19□□□□□ -2.22
RTRAFQ9CQE8 Gm27817-201ENSMUST00000184302 233 ntBASIC1.19□□□□□ -2.22
RTRAFQ9CQE8 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC1.19□□□□□ -2.22
RTRAFQ9CQE8 Mir195b-201ENSMUST00000184814 97 ntBASIC1.19□□□□□ -2.22
RTRAFQ9CQE8 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.19□□□□□ -2.22
RTRAFQ9CQE8 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC1.19□□□□□ -2.22
RTRAFQ9CQE8 Gm5001-201ENSMUST00000204361 331 ntBASIC1.19□□□□□ -2.22
RTRAFQ9CQE8 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC1.19□□□□□ -2.22
RTRAFQ9CQE8 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC1.19□□□□□ -2.22
RTRAFQ9CQE8 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.19□□□□□ -2.22
RTRAFQ9CQE8 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.19□□□□□ -2.22
RTRAFQ9CQE8 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
RTRAFQ9CQE8 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
RTRAFQ9CQE8 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
RTRAFQ9CQE8 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
RTRAFQ9CQE8 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.18□□□□□ -2.22
RTRAFQ9CQE8 AC163660.3-201ENSMUST00000224253 1563 ntBASIC1.18□□□□□ -2.22
RTRAFQ9CQE8 Gm26396-201ENSMUST00000104093 132 ntBASIC1.18□□□□□ -2.22
RTRAFQ9CQE8 Gm12255-201ENSMUST00000117184 284 ntBASIC1.18□□□□□ -2.22
RTRAFQ9CQE8 Gm22718-201ENSMUST00000122701 315 ntBASIC1.18□□□□□ -2.22
RTRAFQ9CQE8 Gm24577-201ENSMUST00000158580 63 ntBASIC1.18□□□□□ -2.22
RTRAFQ9CQE8 Gm20438-201ENSMUST00000174441 329 ntBASIC1.18□□□□□ -2.22
RTRAFQ9CQE8 Gm22308-201ENSMUST00000177609 107 ntBASIC1.18□□□□□ -2.22
RTRAFQ9CQE8 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.18□□□□□ -2.22
RTRAFQ9CQE8 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.18□□□□□ -2.22
RTRAFQ9CQE8 Gm29005-201ENSMUST00000186773 320 ntBASIC1.18□□□□□ -2.22
RTRAFQ9CQE8 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
RTRAFQ9CQE8 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.18□□□□□ -2.22
RTRAFQ9CQE8 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC1.18□□□□□ -2.22
RTRAFQ9CQE8 CT025579.1-201ENSMUST00000223779 366 ntBASIC1.18□□□□□ -2.22
RTRAFQ9CQE8 CT025538.2-201ENSMUST00000226083 772 ntBASIC1.18□□□□□ -2.22
RTRAFQ9CQE8 Mir429-201ENSMUST00000083493 83 ntBASIC1.18□□□□□ -2.22
RTRAFQ9CQE8 Gm22834-201ENSMUST00000102021 79 ntBASIC1.17□□□□□ -2.22
RTRAFQ9CQE8 Gm25759-201ENSMUST00000103988 129 ntBASIC1.17□□□□□ -2.22
RTRAFQ9CQE8 Gm22713-201ENSMUST00000116895 130 ntBASIC1.17□□□□□ -2.22
RTRAFQ9CQE8 Gm14364-201ENSMUST00000129209 267 ntBASIC1.17□□□□□ -2.22
RTRAFQ9CQE8 Gm22316-201ENSMUST00000158012 216 ntBASIC1.17□□□□□ -2.22
RTRAFQ9CQE8 Gm25956-201ENSMUST00000175115 217 ntBASIC1.17□□□□□ -2.22
RTRAFQ9CQE8 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC1.17□□□□□ -2.22
RTRAFQ9CQE8 Mir7j-201ENSMUST00000184427 122 ntBASIC1.17□□□□□ -2.22
RTRAFQ9CQE8 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC1.17□□□□□ -2.22
RTRAFQ9CQE8 AC147101.1-201ENSMUST00000217964 312 ntBASIC1.17□□□□□ -2.22
RTRAFQ9CQE8 Gm16976-205ENSMUST00000227324 226 ntBASIC1.17□□□□□ -2.22
RTRAFQ9CQE8 Gm24150-201ENSMUST00000082759 104 ntBASIC1.17□□□□□ -2.22
RTRAFQ9CQE8 Gm15115-201ENSMUST00000121145 264 ntBASIC1.16□□□□□ -2.22
RTRAFQ9CQE8 Gm14972-201ENSMUST00000121780 364 ntBASIC1.16□□□□□ -2.22
RTRAFQ9CQE8 Gm25054-201ENSMUST00000157370 97 ntBASIC1.16□□□□□ -2.22
RTRAFQ9CQE8 Gm22768-201ENSMUST00000158366 153 ntBASIC1.16□□□□□ -2.22
RTRAFQ9CQE8 Gm22841-201ENSMUST00000158443 62 ntBASIC1.16□□□□□ -2.22
RTRAFQ9CQE8 Gm16038-201ENSMUST00000159317 193 ntBASIC1.16□□□□□ -2.22
RTRAFQ9CQE8 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.16□□□□□ -2.22
RTRAFQ9CQE8 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
RTRAFQ9CQE8 Gm25936-201ENSMUST00000179952 114 ntBASIC1.16□□□□□ -2.22
RTRAFQ9CQE8 Gm28597-201ENSMUST00000187664 666 ntBASIC1.16□□□□□ -2.22
RTRAFQ9CQE8 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.16□□□□□ -2.22
RTRAFQ9CQE8 Gm44337-201ENSMUST00000196553 114 ntBASIC1.16□□□□□ -2.22
RTRAFQ9CQE8 Gm44483-201ENSMUST00000197203 97 ntBASIC1.16□□□□□ -2.22
RTRAFQ9CQE8 Gm18546-201ENSMUST00000197245 676 ntBASIC1.16□□□□□ -2.22
RTRAFQ9CQE8 Gm43487-201ENSMUST00000200331 1031 ntBASIC1.16□□□□□ -2.22
RTRAFQ9CQE8 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
RTRAFQ9CQE8 Gm19441-201ENSMUST00000221545 330 ntBASIC1.16□□□□□ -2.22
RTRAFQ9CQE8 Ear14-201ENSMUST00000049559 468 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms