Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.8□□□□□ -2.12
Sf3b1Q99NB9 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC1.8□□□□□ -2.12
Sf3b1Q99NB9 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.8□□□□□ -2.12
Sf3b1Q99NB9 AC114916.1-201ENSMUST00000228465 494 ntBASIC1.8□□□□□ -2.12
Sf3b1Q99NB9 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Sf3b1Q99NB9 Gm25651-201ENSMUST00000083782 119 ntBASIC1.8□□□□□ -2.12
Sf3b1Q99NB9 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC1.8□□□□□ -2.12
Sf3b1Q99NB9 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.79□□□□□ -2.12
Sf3b1Q99NB9 Gm24172-201ENSMUST00000104127 117 ntBASIC1.79□□□□□ -2.12
Sf3b1Q99NB9 Gm24338-201ENSMUST00000104205 127 ntBASIC1.79□□□□□ -2.12
Sf3b1Q99NB9 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC1.79□□□□□ -2.12
Sf3b1Q99NB9 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC1.79□□□□□ -2.12
Sf3b1Q99NB9 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC1.79□□□□□ -2.12
Sf3b1Q99NB9 Gm14355-201ENSMUST00000117352 264 ntBASIC1.79□□□□□ -2.12
Sf3b1Q99NB9 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC1.79□□□□□ -2.12
Sf3b1Q99NB9 Gm11786-201ENSMUST00000120799 155 ntBASIC1.79□□□□□ -2.12
Sf3b1Q99NB9 Gm25269-201ENSMUST00000122601 104 ntBASIC1.79□□□□□ -2.12
Sf3b1Q99NB9 Gm24892-201ENSMUST00000122747 104 ntBASIC1.79□□□□□ -2.12
Sf3b1Q99NB9 Gm14364-201ENSMUST00000129209 267 ntBASIC1.79□□□□□ -2.12
Sf3b1Q99NB9 Gm24191-201ENSMUST00000157977 122 ntBASIC1.79□□□□□ -2.12
Sf3b1Q99NB9 Gm24084-201ENSMUST00000175173 137 ntBASIC1.79□□□□□ -2.12
Sf3b1Q99NB9 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Sf3b1Q99NB9 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC1.79□□□□□ -2.12
Sf3b1Q99NB9 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Sf3b1Q99NB9 Gm42570-201ENSMUST00000195937 292 ntBASIC1.79□□□□□ -2.12
Sf3b1Q99NB9 Gm25820-201ENSMUST00000198589 127 ntBASIC1.79□□□□□ -2.12
Sf3b1Q99NB9 Gm5034-201ENSMUST00000199115 634 ntBASIC1.79□□□□□ -2.12
Sf3b1Q99NB9 Gm44482-201ENSMUST00000199232 103 ntBASIC1.79□□□□□ -2.12
Sf3b1Q99NB9 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.79□□□□□ -2.12
Sf3b1Q99NB9 AC167192.2-201ENSMUST00000224794 198 ntBASIC1.79□□□□□ -2.12
Sf3b1Q99NB9 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Sf3b1Q99NB9 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.79□□□□□ -2.12
Sf3b1Q99NB9 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.79□□□□□ -2.12
Sf3b1Q99NB9 AC133079.1-201ENSMUST00000220943 1881 ntBASIC1.79□□□□□ -2.12
Sf3b1Q99NB9 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.78□□□□□ -2.12
Sf3b1Q99NB9 Gm14709-201ENSMUST00000121225 304 ntBASIC1.78□□□□□ -2.12
Sf3b1Q99NB9 Gm25115-201ENSMUST00000157187 140 ntBASIC1.78□□□□□ -2.12
Sf3b1Q99NB9 Mir1949-201ENSMUST00000157434 141 ntBASIC1.78□□□□□ -2.12
Sf3b1Q99NB9 Gm24480-201ENSMUST00000157442 103 ntBASIC1.78□□□□□ -2.12
Sf3b1Q99NB9 Gm23557-201ENSMUST00000157820 138 ntBASIC1.78□□□□□ -2.12
Sf3b1Q99NB9 Gm22654-201ENSMUST00000157874 105 ntBASIC1.78□□□□□ -2.12
Sf3b1Q99NB9 Gm26501-201ENSMUST00000178307 107 ntBASIC1.78□□□□□ -2.12
Sf3b1Q99NB9 Gm21885-201ENSMUST00000178891 327 ntBASIC1.78□□□□□ -2.12
Sf3b1Q99NB9 Gm5900-201ENSMUST00000179862 375 ntBASIC1.78□□□□□ -2.12
Sf3b1Q99NB9 Gm26864-201ENSMUST00000181346 156 ntBASIC1.78□□□□□ -2.12
Sf3b1Q99NB9 Gm9892-201ENSMUST00000182415 992 ntBASIC1.78□□□□□ -2.12
Sf3b1Q99NB9 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.78□□□□□ -2.12
Sf3b1Q99NB9 Gm27313-201ENSMUST00000183500 142 ntBASIC1.78□□□□□ -2.12
Sf3b1Q99NB9 Mir6399-201ENSMUST00000184050 84 ntBASIC1.78□□□□□ -2.12
Sf3b1Q99NB9 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Sf3b1Q99NB9 Gm28506-201ENSMUST00000189937 150 ntBASIC1.78□□□□□ -2.12
Sf3b1Q99NB9 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Sf3b1Q99NB9 Gm5001-201ENSMUST00000204361 331 ntBASIC1.78□□□□□ -2.12
Sf3b1Q99NB9 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC1.78□□□□□ -2.12
Sf3b1Q99NB9 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.78□□□□□ -2.12
Sf3b1Q99NB9 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.78□□□□□ -2.12
Sf3b1Q99NB9 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Sf3b1Q99NB9 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Sf3b1Q99NB9 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.78□□□□□ -2.13
Sf3b1Q99NB9 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Sf3b1Q99NB9 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Sf3b1Q99NB9 Gm26396-201ENSMUST00000104093 132 ntBASIC1.77□□□□□ -2.13
Sf3b1Q99NB9 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.77□□□□□ -2.13
Sf3b1Q99NB9 Gm25054-201ENSMUST00000157370 97 ntBASIC1.77□□□□□ -2.13
Sf3b1Q99NB9 Mir3086-201ENSMUST00000175072 87 ntBASIC1.77□□□□□ -2.13
Sf3b1Q99NB9 Gm18775-201ENSMUST00000190763 586 ntBASIC1.77□□□□□ -2.13
Sf3b1Q99NB9 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.77□□□□□ -2.13
Sf3b1Q99NB9 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.77□□□□□ -2.13
Sf3b1Q99NB9 Gm46312-201ENSMUST00000220961 420 ntBASIC1.77□□□□□ -2.13
Sf3b1Q99NB9 AC112972.1-201ENSMUST00000227329 365 ntBASIC1.77□□□□□ -2.13
Sf3b1Q99NB9 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
Sf3b1Q99NB9 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Sf3b1Q99NB9 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
Sf3b1Q99NB9 Gm37642-201ENSMUST00000193166 1735 ntBASIC1.76□□□□□ -2.13
Sf3b1Q99NB9 Gm14882-201ENSMUST00000117216 218 ntBASIC1.76□□□□□ -2.13
Sf3b1Q99NB9 Gm11891-201ENSMUST00000121241 619 ntBASIC1.76□□□□□ -2.13
Sf3b1Q99NB9 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.76□□□□□ -2.13
Sf3b1Q99NB9 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC1.76□□□□□ -2.13
Sf3b1Q99NB9 Gm23983-201ENSMUST00000157142 114 ntBASIC1.76□□□□□ -2.13
Sf3b1Q99NB9 Gm24409-201ENSMUST00000157881 152 ntBASIC1.76□□□□□ -2.13
Sf3b1Q99NB9 Gm24333-201ENSMUST00000175101 84 ntBASIC1.76□□□□□ -2.13
Sf3b1Q99NB9 Gm19932-201ENSMUST00000177033 313 ntBASIC1.76□□□□□ -2.13
Sf3b1Q99NB9 Gm18588-201ENSMUST00000177308 492 ntBASIC1.76□□□□□ -2.13
Sf3b1Q99NB9 Gm21737-201ENSMUST00000178112 664 ntBASIC1.76□□□□□ -2.13
Sf3b1Q99NB9 Gm21815-201ENSMUST00000178213 664 ntBASIC1.76□□□□□ -2.13
Sf3b1Q99NB9 Gm21729-201ENSMUST00000180058 664 ntBASIC1.76□□□□□ -2.13
Sf3b1Q99NB9 Gm21853-201ENSMUST00000180071 664 ntBASIC1.76□□□□□ -2.13
Sf3b1Q99NB9 Gm20901-201ENSMUST00000180177 664 ntBASIC1.76□□□□□ -2.13
Sf3b1Q99NB9 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Sf3b1Q99NB9 Gm28383-201ENSMUST00000187563 139 ntBASIC1.76□□□□□ -2.13
Sf3b1Q99NB9 Gm29495-201ENSMUST00000189319 664 ntBASIC1.76□□□□□ -2.13
Sf3b1Q99NB9 Gm28090-201ENSMUST00000189458 664 ntBASIC1.76□□□□□ -2.13
Sf3b1Q99NB9 Gm21647-201ENSMUST00000189755 664 ntBASIC1.76□□□□□ -2.13
Sf3b1Q99NB9 Gm29262-201ENSMUST00000190084 196 ntBASIC1.76□□□□□ -2.13
Sf3b1Q99NB9 Gm18433-201ENSMUST00000192747 197 ntBASIC1.76□□□□□ -2.13
Sf3b1Q99NB9 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.76□□□□□ -2.13
Sf3b1Q99NB9 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.76□□□□□ -2.13
Sf3b1Q99NB9 Gm25589-201ENSMUST00000082502 166 ntBASIC1.76□□□□□ -2.13
Sf3b1Q99NB9 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Sf3b1Q99NB9 Gm24282-201ENSMUST00000104232 66 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 105.4 ms