Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm24681-201ENSMUST00000158760 107 ntBASIC2.6□□□□□ -1.99
Msh4Q99MT2 Gm25119-201ENSMUST00000158815 88 ntBASIC2.6□□□□□ -1.99
Msh4Q99MT2 Gm24388-201ENSMUST00000177872 107 ntBASIC2.6□□□□□ -1.99
Msh4Q99MT2 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC2.6□□□□□ -1.99
Msh4Q99MT2 Gm23003-201ENSMUST00000179948 107 ntBASIC2.6□□□□□ -1.99
Msh4Q99MT2 Mir7242-201ENSMUST00000183710 79 ntBASIC2.6□□□□□ -1.99
Msh4Q99MT2 Gm27532-201ENSMUST00000183726 113 ntBASIC2.6□□□□□ -1.99
Msh4Q99MT2 Gm27997-201ENSMUST00000184942 69 ntBASIC2.6□□□□□ -1.99
Msh4Q99MT2 Gm28058-201ENSMUST00000186421 264 ntBASIC2.6□□□□□ -1.99
Msh4Q99MT2 Gm28951-201ENSMUST00000190742 313 ntBASIC2.6□□□□□ -1.99
Msh4Q99MT2 Gm23128-202ENSMUST00000196578 133 ntBASIC2.6□□□□□ -1.99
Msh4Q99MT2 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.6□□□□□ -1.99
Msh4Q99MT2 Gm45296-201ENSMUST00000209625 205 ntBASIC2.6□□□□□ -1.99
Msh4Q99MT2 Gm22062-201ENSMUST00000082563 107 ntBASIC2.6□□□□□ -1.99
Msh4Q99MT2 Gm26265-201ENSMUST00000083277 135 ntBASIC2.6□□□□□ -1.99
Msh4Q99MT2 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC2.6□□□□□ -1.99
Msh4Q99MT2 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.6□□□□□ -1.99
Msh4Q99MT2 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.59□□□□□ -1.99
Msh4Q99MT2 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
Msh4Q99MT2 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Msh4Q99MT2 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.59□□□□□ -1.99
Msh4Q99MT2 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.59□□□□□ -1.99
Msh4Q99MT2 Mir465b-1-201ENSMUST00000103940 79 ntBASIC2.59□□□□□ -1.99
Msh4Q99MT2 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.59□□□□□ -1.99
Msh4Q99MT2 Mir465b-2-201ENSMUST00000104662 79 ntBASIC2.59□□□□□ -1.99
Msh4Q99MT2 Gm12646-201ENSMUST00000119144 238 ntBASIC2.59□□□□□ -1.99
Msh4Q99MT2 Gm14837-201ENSMUST00000119688 206 ntBASIC2.59□□□□□ -1.99
Msh4Q99MT2 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Msh4Q99MT2 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.59□□□□□ -1.99
Msh4Q99MT2 Gm6788-201ENSMUST00000166459 270 ntBASIC2.59□□□□□ -1.99
Msh4Q99MT2 Gm20660-201ENSMUST00000177515 289 ntBASIC2.59□□□□□ -1.99
Msh4Q99MT2 Gm25457-201ENSMUST00000179509 107 ntBASIC2.59□□□□□ -1.99
Msh4Q99MT2 Mir7081-201ENSMUST00000184490 75 ntBASIC2.59□□□□□ -1.99
Msh4Q99MT2 Gm28744-201ENSMUST00000189939 340 ntBASIC2.59□□□□□ -1.99
Msh4Q99MT2 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Msh4Q99MT2 Gm18991-201ENSMUST00000209225 746 ntBASIC2.59□□□□□ -1.99
Msh4Q99MT2 AC167669.4-201ENSMUST00000225967 140 ntBASIC2.59□□□□□ -1.99
Msh4Q99MT2 Gm23246-201ENSMUST00000083371 67 ntBASIC2.59□□□□□ -1.99
Msh4Q99MT2 Gm23264-201ENSMUST00000083372 107 ntBASIC2.59□□□□□ -1.99
Msh4Q99MT2 Mir32-201ENSMUST00000083610 70 ntBASIC2.59□□□□□ -1.99
Msh4Q99MT2 Gm23847-201ENSMUST00000083829 110 ntBASIC2.59□□□□□ -1.99
Msh4Q99MT2 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Msh4Q99MT2 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Msh4Q99MT2 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Msh4Q99MT2 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Msh4Q99MT2 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Msh4Q99MT2 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.58□□□□□ -2
Msh4Q99MT2 Gm23941-201ENSMUST00000101953 107 ntBASIC2.58□□□□□ -2
Msh4Q99MT2 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.58□□□□□ -2
Msh4Q99MT2 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.58□□□□□ -2
Msh4Q99MT2 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.58□□□□□ -2
Msh4Q99MT2 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.58□□□□□ -2
Msh4Q99MT2 Gm27786-201ENSMUST00000184337 70 ntBASIC2.58□□□□□ -2
Msh4Q99MT2 Gm28724-201ENSMUST00000186149 625 ntBASIC2.58□□□□□ -2
Msh4Q99MT2 Gm37081-201ENSMUST00000192034 196 ntBASIC2.58□□□□□ -2
Msh4Q99MT2 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC2.58□□□□□ -2
Msh4Q99MT2 Gm45005-201ENSMUST00000206640 157 ntBASIC2.58□□□□□ -2
Msh4Q99MT2 Gm2829-201ENSMUST00000213121 499 ntBASIC2.58□□□□□ -2
Msh4Q99MT2 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.58□□□□□ -2
Msh4Q99MT2 Gm6030-201ENSMUST00000078768 402 ntBASIC2.58□□□□□ -2
Msh4Q99MT2 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Msh4Q99MT2 Gm23055-201ENSMUST00000082805 94 ntBASIC2.58□□□□□ -2
Msh4Q99MT2 Gm25199-201ENSMUST00000083095 104 ntBASIC2.58□□□□□ -2
Msh4Q99MT2 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.58□□□□□ -2
Msh4Q99MT2 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
Msh4Q99MT2 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.57□□□□□ -2
Msh4Q99MT2 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.57□□□□□ -2
Msh4Q99MT2 Mdga2-203ENSMUST00000113942 423 ntBASIC2.57□□□□□ -2
Msh4Q99MT2 Gm14894-201ENSMUST00000117170 270 ntBASIC2.57□□□□□ -2
Msh4Q99MT2 Gm11572-201ENSMUST00000119164 120 ntBASIC2.57□□□□□ -2
Msh4Q99MT2 Gm13711-201ENSMUST00000119708 453 ntBASIC2.57□□□□□ -2
Msh4Q99MT2 Gm12042-201ENSMUST00000120479 301 ntBASIC2.57□□□□□ -2
Msh4Q99MT2 Gm14215-201ENSMUST00000120578 221 ntBASIC2.57□□□□□ -2
Msh4Q99MT2 Gm26105-201ENSMUST00000157253 190 ntBASIC2.57□□□□□ -2
Msh4Q99MT2 Gm24858-201ENSMUST00000158058 323 ntBASIC2.57□□□□□ -2
Msh4Q99MT2 Gm26214-201ENSMUST00000158581 107 ntBASIC2.57□□□□□ -2
Msh4Q99MT2 Gm24082-201ENSMUST00000175175 83 ntBASIC2.57□□□□□ -2
Msh4Q99MT2 Gm27379-201ENSMUST00000183730 123 ntBASIC2.57□□□□□ -2
Msh4Q99MT2 Mir6399-201ENSMUST00000184050 84 ntBASIC2.57□□□□□ -2
Msh4Q99MT2 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.57□□□□□ -2
Msh4Q99MT2 Gm37449-201ENSMUST00000193016 270 ntBASIC2.57□□□□□ -2
Msh4Q99MT2 Gm18658-201ENSMUST00000195558 270 ntBASIC2.57□□□□□ -2
Msh4Q99MT2 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.57□□□□□ -2
Msh4Q99MT2 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.57□□□□□ -2
Msh4Q99MT2 Gm42594-201ENSMUST00000199511 246 ntBASIC2.57□□□□□ -2
Msh4Q99MT2 Gm44478-201ENSMUST00000204875 114 ntBASIC2.57□□□□□ -2
Msh4Q99MT2 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.57□□□□□ -2
Msh4Q99MT2 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.57□□□□□ -2
Msh4Q99MT2 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.57□□□□□ -2
Msh4Q99MT2 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.57□□□□□ -2
Msh4Q99MT2 Gm24356-201ENSMUST00000082859 106 ntBASIC2.57□□□□□ -2
Msh4Q99MT2 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Msh4Q99MT2 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.57□□□□□ -2
Msh4Q99MT2 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
Msh4Q99MT2 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.57□□□□□ -2
Msh4Q99MT2 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.57□□□□□ -2
Msh4Q99MT2 AC160115.1-201ENSMUST00000224678 1574 ntBASIC2.57□□□□□ -2
Msh4Q99MT2 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.57□□□□□ -2
Msh4Q99MT2 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.56□□□□□ -2
Msh4Q99MT2 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 132.4 ms