Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm44419-201ENSMUST00000203338 229 ntBASIC2.37□□□□□ -2.03
Cstf3Q99LI7 Gm8031-201ENSMUST00000213430 626 ntBASIC2.37□□□□□ -2.03
Cstf3Q99LI7 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.37□□□□□ -2.03
Cstf3Q99LI7 Gm22062-201ENSMUST00000082563 107 ntBASIC2.37□□□□□ -2.03
Cstf3Q99LI7 Gm22685-201ENSMUST00000082848 106 ntBASIC2.37□□□□□ -2.03
Cstf3Q99LI7 Mir423-201ENSMUST00000083584 109 ntBASIC2.37□□□□□ -2.03
Cstf3Q99LI7 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.37□□□□□ -2.03
Cstf3Q99LI7 Gm24817-201ENSMUST00000093672 105 ntBASIC2.37□□□□□ -2.03
Cstf3Q99LI7 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Cstf3Q99LI7 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.36□□□□□ -2.03
Cstf3Q99LI7 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Cstf3Q99LI7 Gm25407-201ENSMUST00000104102 134 ntBASIC2.36□□□□□ -2.03
Cstf3Q99LI7 Gm24670-201ENSMUST00000104154 132 ntBASIC2.36□□□□□ -2.03
Cstf3Q99LI7 Gm13885-201ENSMUST00000117569 187 ntBASIC2.36□□□□□ -2.03
Cstf3Q99LI7 Gm11935-201ENSMUST00000118608 399 ntBASIC2.36□□□□□ -2.03
Cstf3Q99LI7 Gm13432-201ENSMUST00000118861 241 ntBASIC2.36□□□□□ -2.03
Cstf3Q99LI7 Gm25270-201ENSMUST00000122606 138 ntBASIC2.36□□□□□ -2.03
Cstf3Q99LI7 Gm25153-201ENSMUST00000157118 156 ntBASIC2.36□□□□□ -2.03
Cstf3Q99LI7 Gm23262-201ENSMUST00000158323 168 ntBASIC2.36□□□□□ -2.03
Cstf3Q99LI7 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Cstf3Q99LI7 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC2.36□□□□□ -2.03
Cstf3Q99LI7 Gm20660-201ENSMUST00000177515 289 ntBASIC2.36□□□□□ -2.03
Cstf3Q99LI7 Gm24308-201ENSMUST00000177773 114 ntBASIC2.36□□□□□ -2.03
Cstf3Q99LI7 Gm3852-201ENSMUST00000182781 264 ntBASIC2.36□□□□□ -2.03
Cstf3Q99LI7 Mir6916-201ENSMUST00000184514 63 ntBASIC2.36□□□□□ -2.03
Cstf3Q99LI7 Gm28257-201ENSMUST00000185244 463 ntBASIC2.36□□□□□ -2.03
Cstf3Q99LI7 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC2.36□□□□□ -2.03
Cstf3Q99LI7 Gm44182-201ENSMUST00000204052 115 ntBASIC2.36□□□□□ -2.03
Cstf3Q99LI7 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC2.36□□□□□ -2.03
Cstf3Q99LI7 Gm45207-201ENSMUST00000207469 145 ntBASIC2.36□□□□□ -2.03
Cstf3Q99LI7 Gm45452-201ENSMUST00000210905 177 ntBASIC2.36□□□□□ -2.03
Cstf3Q99LI7 AC116460.1-201ENSMUST00000219040 313 ntBASIC2.36□□□□□ -2.03
Cstf3Q99LI7 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.36□□□□□ -2.03
Cstf3Q99LI7 AC167669.4-201ENSMUST00000225967 140 ntBASIC2.36□□□□□ -2.03
Cstf3Q99LI7 CT030182.3-201ENSMUST00000225986 582 ntBASIC2.36□□□□□ -2.03
Cstf3Q99LI7 Gm26329-201ENSMUST00000093723 110 ntBASIC2.36□□□□□ -2.03
Cstf3Q99LI7 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Cstf3Q99LI7 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.36□□□□□ -2.03
Cstf3Q99LI7 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Cstf3Q99LI7 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.36□□□□□ -2.03
Cstf3Q99LI7 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Cstf3Q99LI7 Gm25168-201ENSMUST00000104189 132 ntBASIC2.35□□□□□ -2.03
Cstf3Q99LI7 Gm22151-201ENSMUST00000116963 58 ntBASIC2.35□□□□□ -2.03
Cstf3Q99LI7 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.35□□□□□ -2.03
Cstf3Q99LI7 Gm15365-201ENSMUST00000122392 300 ntBASIC2.35□□□□□ -2.03
Cstf3Q99LI7 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.35□□□□□ -2.03
Cstf3Q99LI7 Gm22598-201ENSMUST00000157600 127 ntBASIC2.35□□□□□ -2.03
Cstf3Q99LI7 Snord11-201ENSMUST00000158468 84 ntBASIC2.35□□□□□ -2.03
Cstf3Q99LI7 Gm24348-201ENSMUST00000158710 130 ntBASIC2.35□□□□□ -2.03
Cstf3Q99LI7 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.35□□□□□ -2.03
Cstf3Q99LI7 Gm24799-201ENSMUST00000178431 79 ntBASIC2.35□□□□□ -2.03
Cstf3Q99LI7 Gm27532-201ENSMUST00000183726 113 ntBASIC2.35□□□□□ -2.03
Cstf3Q99LI7 Gm29005-201ENSMUST00000186773 320 ntBASIC2.35□□□□□ -2.03
Cstf3Q99LI7 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.35□□□□□ -2.03
Cstf3Q99LI7 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.35□□□□□ -2.03
Cstf3Q99LI7 Mir133a-1-201ENSMUST00000083465 68 ntBASIC2.35□□□□□ -2.03
Cstf3Q99LI7 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.35□□□□□ -2.03
Cstf3Q99LI7 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Cstf3Q99LI7 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.34□□□□□ -2.03
Cstf3Q99LI7 Mir872-201ENSMUST00000104728 81 ntBASIC2.34□□□□□ -2.03
Cstf3Q99LI7 Gm26247-201ENSMUST00000116702 91 ntBASIC2.34□□□□□ -2.03
Cstf3Q99LI7 Gm23391-201ENSMUST00000157579 104 ntBASIC2.34□□□□□ -2.03
Cstf3Q99LI7 Gm25888-201ENSMUST00000157778 302 ntBASIC2.34□□□□□ -2.03
Cstf3Q99LI7 Gm22447-201ENSMUST00000158155 92 ntBASIC2.34□□□□□ -2.03
Cstf3Q99LI7 Gm24771-201ENSMUST00000158508 137 ntBASIC2.34□□□□□ -2.03
Cstf3Q99LI7 Gm25488-201ENSMUST00000158728 118 ntBASIC2.34□□□□□ -2.03
Cstf3Q99LI7 Gm23921-201ENSMUST00000175258 107 ntBASIC2.34□□□□□ -2.03
Cstf3Q99LI7 Gm25933-201ENSMUST00000178943 108 ntBASIC2.34□□□□□ -2.03
Cstf3Q99LI7 Trbv6-201ENSMUST00000193743 276 ntBASIC2.34□□□□□ -2.03
Cstf3Q99LI7 Gm43583-201ENSMUST00000199235 303 ntBASIC2.34□□□□□ -2.03
Cstf3Q99LI7 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.34□□□□□ -2.03
Cstf3Q99LI7 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.34□□□□□ -2.03
Cstf3Q99LI7 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC2.34□□□□□ -2.03
Cstf3Q99LI7 Gm22622-201ENSMUST00000082870 129 ntBASIC2.34□□□□□ -2.03
Cstf3Q99LI7 Gm23345-201ENSMUST00000083817 150 ntBASIC2.34□□□□□ -2.03
Cstf3Q99LI7 Gm25628-201ENSMUST00000084002 105 ntBASIC2.34□□□□□ -2.03
Cstf3Q99LI7 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.34□□□□□ -2.04
Cstf3Q99LI7 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.33□□□□□ -2.04
Cstf3Q99LI7 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.33□□□□□ -2.04
Cstf3Q99LI7 Gm14298-201ENSMUST00000139032 237 ntBASIC2.33□□□□□ -2.04
Cstf3Q99LI7 Gm16356-201ENSMUST00000143300 169 ntBASIC2.33□□□□□ -2.04
Cstf3Q99LI7 Mir5624-201ENSMUST00000176635 61 ntBASIC2.33□□□□□ -2.04
Cstf3Q99LI7 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC2.33□□□□□ -2.04
Cstf3Q99LI7 Gm28579-201ENSMUST00000186143 369 ntBASIC2.33□□□□□ -2.04
Cstf3Q99LI7 Mir7215-201ENSMUST00000200383 51 ntBASIC2.33□□□□□ -2.04
Cstf3Q99LI7 Gm44858-201ENSMUST00000207360 154 ntBASIC2.33□□□□□ -2.04
Cstf3Q99LI7 AC155712.1-201ENSMUST00000219704 160 ntBASIC2.33□□□□□ -2.04
Cstf3Q99LI7 Gm22978-201ENSMUST00000082607 160 ntBASIC2.33□□□□□ -2.04
Cstf3Q99LI7 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
Cstf3Q99LI7 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.32□□□□□ -2.04
Cstf3Q99LI7 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Cstf3Q99LI7 Gm22713-201ENSMUST00000116895 130 ntBASIC2.32□□□□□ -2.04
Cstf3Q99LI7 Gm13913-201ENSMUST00000121126 260 ntBASIC2.32□□□□□ -2.04
Cstf3Q99LI7 Gm25961-201ENSMUST00000157174 135 ntBASIC2.32□□□□□ -2.04
Cstf3Q99LI7 Gm24210-201ENSMUST00000158263 133 ntBASIC2.32□□□□□ -2.04
Cstf3Q99LI7 Gm22947-201ENSMUST00000158559 91 ntBASIC2.32□□□□□ -2.04
Cstf3Q99LI7 Gm24618-201ENSMUST00000177718 94 ntBASIC2.32□□□□□ -2.04
Cstf3Q99LI7 Gm23953-201ENSMUST00000178214 94 ntBASIC2.32□□□□□ -2.04
Cstf3Q99LI7 Gm26332-201ENSMUST00000179813 94 ntBASIC2.32□□□□□ -2.04
Cstf3Q99LI7 Gm22863-201ENSMUST00000180265 94 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 129.7 ms