Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Gm6003-201ENSMUST00000187903 463 ntBASIC0.18□□□□□ -2.38
Cspg4Q8VHY0 Gm29627-201ENSMUST00000187984 463 ntBASIC0.18□□□□□ -2.38
Cspg4Q8VHY0 Gm44391-201ENSMUST00000198490 93 ntBASIC0.18□□□□□ -2.38
Cspg4Q8VHY0 Gm44088-201ENSMUST00000204595 237 ntBASIC0.18□□□□□ -2.38
Cspg4Q8VHY0 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.18□□□□□ -2.38
Cspg4Q8VHY0 Gm25739-201ENSMUST00000082886 107 ntBASIC0.18□□□□□ -2.38
Cspg4Q8VHY0 Gm22443-201ENSMUST00000082890 107 ntBASIC0.18□□□□□ -2.38
Cspg4Q8VHY0 Gm26327-201ENSMUST00000093724 111 ntBASIC0.18□□□□□ -2.38
Cspg4Q8VHY0 Mir487b-201ENSMUST00000102265 82 ntBASIC0.18□□□□□ -2.38
Cspg4Q8VHY0 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
Cspg4Q8VHY0 Gm24079-201ENSMUST00000104352 132 ntBASIC0.18□□□□□ -2.38
Cspg4Q8VHY0 Gm14657-201ENSMUST00000117461 302 ntBASIC0.18□□□□□ -2.38
Cspg4Q8VHY0 Gm15807-201ENSMUST00000119880 1128 ntBASIC0.18□□□□□ -2.38
Cspg4Q8VHY0 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.18□□□□□ -2.38
Cspg4Q8VHY0 Gm22233-201ENSMUST00000157464 114 ntBASIC0.18□□□□□ -2.38
Cspg4Q8VHY0 Gm25371-201ENSMUST00000158162 101 ntBASIC0.18□□□□□ -2.38
Cspg4Q8VHY0 Gm25868-201ENSMUST00000158253 114 ntBASIC0.18□□□□□ -2.38
Cspg4Q8VHY0 Gm20415-201ENSMUST00000172877 423 ntBASIC0.18□□□□□ -2.38
Cspg4Q8VHY0 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
Cspg4Q8VHY0 Gm37713-201ENSMUST00000191746 198 ntBASIC0.18□□□□□ -2.38
Cspg4Q8VHY0 Mir3961-201ENSMUST00000198795 59 ntBASIC0.18□□□□□ -2.38
Cspg4Q8VHY0 Gm45815-201ENSMUST00000220241 146 ntBASIC0.18□□□□□ -2.38
Cspg4Q8VHY0 CT009733.1-201ENSMUST00000225322 425 ntBASIC0.18□□□□□ -2.38
Cspg4Q8VHY0 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
Cspg4Q8VHY0 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
Cspg4Q8VHY0 Gm11606-201ENSMUST00000120706 617 ntBASIC0.17□□□□□ -2.38
Cspg4Q8VHY0 Gm29413-201ENSMUST00000186019 880 ntBASIC0.17□□□□□ -2.38
Cspg4Q8VHY0 Gm29134-201ENSMUST00000186579 126 ntBASIC0.17□□□□□ -2.38
Cspg4Q8VHY0 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC0.17□□□□□ -2.38
Cspg4Q8VHY0 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC0.17□□□□□ -2.38
Cspg4Q8VHY0 Gm29639-201ENSMUST00000188375 580 ntBASIC0.17□□□□□ -2.38
Cspg4Q8VHY0 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC0.17□□□□□ -2.38
Cspg4Q8VHY0 Gm28337-201ENSMUST00000190425 666 ntBASIC0.17□□□□□ -2.38
Cspg4Q8VHY0 Gm31123-201ENSMUST00000192094 666 ntBASIC0.17□□□□□ -2.38
Cspg4Q8VHY0 Gm43602-201ENSMUST00000196772 300 ntBASIC0.17□□□□□ -2.38
Cspg4Q8VHY0 AC124542.1-201ENSMUST00000205588 908 ntBASIC0.17□□□□□ -2.38
Cspg4Q8VHY0 AC122225.1-201ENSMUST00000215641 369 ntBASIC0.17□□□□□ -2.38
Cspg4Q8VHY0 Gm46193-201ENSMUST00000219399 364 ntBASIC0.17□□□□□ -2.38
Cspg4Q8VHY0 AC154424.1-201ENSMUST00000225883 799 ntBASIC0.17□□□□□ -2.38
Cspg4Q8VHY0 Gm22247-201ENSMUST00000082476 131 ntBASIC0.17□□□□□ -2.38
Cspg4Q8VHY0 Gm25810-201ENSMUST00000082752 108 ntBASIC0.17□□□□□ -2.38
Cspg4Q8VHY0 Gm26326-201ENSMUST00000083070 129 ntBASIC0.17□□□□□ -2.38
Cspg4Q8VHY0 Mir33-201ENSMUST00000083531 69 ntBASIC0.17□□□□□ -2.38
Cspg4Q8VHY0 Mir214-201ENSMUST00000083582 110 ntBASIC0.17□□□□□ -2.38
Cspg4Q8VHY0 Gm12392-201ENSMUST00000118014 938 ntBASIC0.16□□□□□ -2.38
Cspg4Q8VHY0 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC0.16□□□□□ -2.38
Cspg4Q8VHY0 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC0.16□□□□□ -2.38
Cspg4Q8VHY0 Gm14491-201ENSMUST00000121919 199 ntBASIC0.16□□□□□ -2.38
Cspg4Q8VHY0 Gm22477-201ENSMUST00000122569 316 ntBASIC0.16□□□□□ -2.38
Cspg4Q8VHY0 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC0.16□□□□□ -2.38
Cspg4Q8VHY0 Gm22114-201ENSMUST00000177756 107 ntBASIC0.16□□□□□ -2.38
Cspg4Q8VHY0 Gm37869-201ENSMUST00000193385 595 ntBASIC0.16□□□□□ -2.38
Cspg4Q8VHY0 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC0.16□□□□□ -2.38
Cspg4Q8VHY0 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC0.16□□□□□ -2.38
Cspg4Q8VHY0 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC0.16□□□□□ -2.38
Cspg4Q8VHY0 Gm25589-201ENSMUST00000082502 166 ntBASIC0.16□□□□□ -2.38
Cspg4Q8VHY0 Gm22061-201ENSMUST00000082557 107 ntBASIC0.16□□□□□ -2.38
Cspg4Q8VHY0 Gm23690-201ENSMUST00000083036 94 ntBASIC0.16□□□□□ -2.38
Cspg4Q8VHY0 Gm25257-201ENSMUST00000083907 110 ntBASIC0.16□□□□□ -2.38
Cspg4Q8VHY0 Gm24582-201ENSMUST00000103967 103 ntBASIC0.16□□□□□ -2.38
Cspg4Q8VHY0 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC0.16□□□□□ -2.38
Cspg4Q8VHY0 Gm18356-201ENSMUST00000185677 623 ntBASIC0.16□□□□□ -2.38
Cspg4Q8VHY0 Gm29661-201ENSMUST00000186781 315 ntBASIC0.16□□□□□ -2.38
Cspg4Q8VHY0 Gm29308-201ENSMUST00000188863 315 ntBASIC0.16□□□□□ -2.38
Cspg4Q8VHY0 Gm23370-202ENSMUST00000197008 129 ntBASIC0.16□□□□□ -2.38
Cspg4Q8VHY0 Gm45912-201ENSMUST00000210646 543 ntBASIC0.16□□□□□ -2.38
Cspg4Q8VHY0 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC0.16□□□□□ -2.38
Cspg4Q8VHY0 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
Cspg4Q8VHY0 Mir92-2-201ENSMUST00000083679 91 ntBASIC0.16□□□□□ -2.38
Cspg4Q8VHY0 Gm25897-201ENSMUST00000083709 107 ntBASIC0.16□□□□□ -2.38
Cspg4Q8VHY0 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC0.15□□□□□ -2.38
Cspg4Q8VHY0 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC0.15□□□□□ -2.38
Cspg4Q8VHY0 Gm22678-201ENSMUST00000116974 101 ntBASIC0.15□□□□□ -2.38
Cspg4Q8VHY0 Gm12797-201ENSMUST00000118645 273 ntBASIC0.15□□□□□ -2.38
Cspg4Q8VHY0 Gm24592-201ENSMUST00000122505 106 ntBASIC0.15□□□□□ -2.38
Cspg4Q8VHY0 Gm22027-201ENSMUST00000122737 127 ntBASIC0.15□□□□□ -2.38
Cspg4Q8VHY0 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.15□□□□□ -2.38
Cspg4Q8VHY0 Gm2962-201ENSMUST00000159266 336 ntBASIC0.15□□□□□ -2.38
Cspg4Q8VHY0 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.38
Cspg4Q8VHY0 Gm27943-201ENSMUST00000184844 116 ntBASIC0.15□□□□□ -2.38
Cspg4Q8VHY0 Gm28110-201ENSMUST00000185782 315 ntBASIC0.15□□□□□ -2.38
Cspg4Q8VHY0 Gm29057-201ENSMUST00000186468 315 ntBASIC0.15□□□□□ -2.38
Cspg4Q8VHY0 Gm28737-201ENSMUST00000186808 315 ntBASIC0.15□□□□□ -2.38
Cspg4Q8VHY0 Gm29147-201ENSMUST00000186846 315 ntBASIC0.15□□□□□ -2.38
Cspg4Q8VHY0 Gm29118-201ENSMUST00000186908 315 ntBASIC0.15□□□□□ -2.38
Cspg4Q8VHY0 Gm28433-201ENSMUST00000187085 315 ntBASIC0.15□□□□□ -2.38
Cspg4Q8VHY0 Gm29227-201ENSMUST00000187139 315 ntBASIC0.15□□□□□ -2.38
Cspg4Q8VHY0 Gm28759-201ENSMUST00000187621 315 ntBASIC0.15□□□□□ -2.38
Cspg4Q8VHY0 Gm28831-201ENSMUST00000187739 315 ntBASIC0.15□□□□□ -2.38
Cspg4Q8VHY0 Gm29034-201ENSMUST00000188099 315 ntBASIC0.15□□□□□ -2.38
Cspg4Q8VHY0 Gm28752-201ENSMUST00000188340 315 ntBASIC0.15□□□□□ -2.38
Cspg4Q8VHY0 Gm28474-201ENSMUST00000188501 315 ntBASIC0.15□□□□□ -2.38
Cspg4Q8VHY0 Gm28569-201ENSMUST00000188748 315 ntBASIC0.15□□□□□ -2.38
Cspg4Q8VHY0 Gm28120-201ENSMUST00000188812 315 ntBASIC0.15□□□□□ -2.38
Cspg4Q8VHY0 Gm28369-201ENSMUST00000188993 315 ntBASIC0.15□□□□□ -2.38
Cspg4Q8VHY0 Gm28537-201ENSMUST00000189026 315 ntBASIC0.15□□□□□ -2.38
Cspg4Q8VHY0 Gm28861-201ENSMUST00000189681 315 ntBASIC0.15□□□□□ -2.38
Cspg4Q8VHY0 Gm28717-201ENSMUST00000189950 315 ntBASIC0.15□□□□□ -2.38
Cspg4Q8VHY0 Gm29180-201ENSMUST00000190003 315 ntBASIC0.15□□□□□ -2.38
Cspg4Q8VHY0 Gm29575-201ENSMUST00000190597 315 ntBASIC0.15□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms