Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm27271-201ENSMUST00000183509 170 ntBASIC0.63□□□□□ -2.31
Nup35Q8R4R6 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC0.63□□□□□ -2.31
Nup35Q8R4R6 Gm37923-201ENSMUST00000191624 161 ntBASIC0.63□□□□□ -2.31
Nup35Q8R4R6 Gm45232-201ENSMUST00000207811 162 ntBASIC0.63□□□□□ -2.31
Nup35Q8R4R6 AC168056.1-201ENSMUST00000225270 180 ntBASIC0.63□□□□□ -2.31
Nup35Q8R4R6 Gm23735-201ENSMUST00000082551 134 ntBASIC0.63□□□□□ -2.31
Nup35Q8R4R6 Gm24536-201ENSMUST00000083144 107 ntBASIC0.63□□□□□ -2.31
Nup35Q8R4R6 AC161250.2-201ENSMUST00000215114 3107 ntBASIC0.62□□□□□ -2.31
Nup35Q8R4R6 Gm25377-201ENSMUST00000104334 129 ntBASIC0.62□□□□□ -2.31
Nup35Q8R4R6 Gm25563-201ENSMUST00000104603 74 ntBASIC0.62□□□□□ -2.31
Nup35Q8R4R6 Gm22551-201ENSMUST00000157795 103 ntBASIC0.62□□□□□ -2.31
Nup35Q8R4R6 Gm25768-201ENSMUST00000158570 98 ntBASIC0.62□□□□□ -2.31
Nup35Q8R4R6 Gm27326-201ENSMUST00000183504 95 ntBASIC0.62□□□□□ -2.31
Nup35Q8R4R6 Mir7665-201ENSMUST00000184907 63 ntBASIC0.62□□□□□ -2.31
Nup35Q8R4R6 Gm9251-201ENSMUST00000197202 628 ntBASIC0.62□□□□□ -2.31
Nup35Q8R4R6 Gm43245-201ENSMUST00000197603 468 ntBASIC0.62□□□□□ -2.31
Nup35Q8R4R6 Gm24977-201ENSMUST00000083106 163 ntBASIC0.62□□□□□ -2.31
Nup35Q8R4R6 Mir374b-201ENSMUST00000102314 95 ntBASIC0.61□□□□□ -2.31
Nup35Q8R4R6 Gm12106-201ENSMUST00000116006 1200 ntBASIC0.61□□□□□ -2.31
Nup35Q8R4R6 Gm11389-201ENSMUST00000121407 430 ntBASIC0.61□□□□□ -2.31
Nup35Q8R4R6 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC0.61□□□□□ -2.31
Nup35Q8R4R6 Gm23120-201ENSMUST00000157654 287 ntBASIC0.61□□□□□ -2.31
Nup35Q8R4R6 Gm17052-201ENSMUST00000165496 289 ntBASIC0.61□□□□□ -2.31
Nup35Q8R4R6 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC0.61□□□□□ -2.31
Nup35Q8R4R6 Gm25956-201ENSMUST00000175115 217 ntBASIC0.61□□□□□ -2.31
Nup35Q8R4R6 Gm20630-201ENSMUST00000177387 551 ntBASIC0.61□□□□□ -2.31
Nup35Q8R4R6 Gm22584-201ENSMUST00000177935 92 ntBASIC0.61□□□□□ -2.31
Nup35Q8R4R6 Gm23267-201ENSMUST00000178490 132 ntBASIC0.61□□□□□ -2.31
Nup35Q8R4R6 Gm29005-201ENSMUST00000186773 320 ntBASIC0.61□□□□□ -2.31
Nup35Q8R4R6 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
Nup35Q8R4R6 Gm36984-201ENSMUST00000192770 235 ntBASIC0.61□□□□□ -2.31
Nup35Q8R4R6 AC162931.1-201ENSMUST00000214184 267 ntBASIC0.61□□□□□ -2.31
Nup35Q8R4R6 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC0.61□□□□□ -2.31
Nup35Q8R4R6 AC069561.2-201ENSMUST00000217596 420 ntBASIC0.61□□□□□ -2.31
Nup35Q8R4R6 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
Nup35Q8R4R6 AC163646.2-201ENSMUST00000227962 141 ntBASIC0.61□□□□□ -2.31
Nup35Q8R4R6 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
Nup35Q8R4R6 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
Nup35Q8R4R6 Gm43706-201ENSMUST00000198767 2652 ntBASIC0.61□□□□□ -2.31
Nup35Q8R4R6 AC124426.1-203ENSMUST00000221814 1362 ntBASIC0.6□□□□□ -2.31
Nup35Q8R4R6 Gm23015-201ENSMUST00000104145 128 ntBASIC0.6□□□□□ -2.31
Nup35Q8R4R6 Gm25663-201ENSMUST00000157698 135 ntBASIC0.6□□□□□ -2.31
Nup35Q8R4R6 Gm7925-201ENSMUST00000166690 401 ntBASIC0.6□□□□□ -2.31
Nup35Q8R4R6 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.6□□□□□ -2.31
Nup35Q8R4R6 Gm23967-201ENSMUST00000175062 78 ntBASIC0.6□□□□□ -2.31
Nup35Q8R4R6 Gm22929-201ENSMUST00000175517 107 ntBASIC0.6□□□□□ -2.31
Nup35Q8R4R6 Gm21815-201ENSMUST00000178213 664 ntBASIC0.6□□□□□ -2.31
Nup35Q8R4R6 Gm24390-201ENSMUST00000179578 62 ntBASIC0.6□□□□□ -2.31
Nup35Q8R4R6 Gm22633-201ENSMUST00000179834 107 ntBASIC0.6□□□□□ -2.31
Nup35Q8R4R6 Gm23862-201ENSMUST00000180342 94 ntBASIC0.6□□□□□ -2.31
Nup35Q8R4R6 Gm9022-202ENSMUST00000183285 483 ntBASIC0.6□□□□□ -2.31
Nup35Q8R4R6 Gm28560-201ENSMUST00000186091 315 ntBASIC0.6□□□□□ -2.31
Nup35Q8R4R6 Gm28334-201ENSMUST00000186653 315 ntBASIC0.6□□□□□ -2.31
Nup35Q8R4R6 Gm28495-201ENSMUST00000188452 315 ntBASIC0.6□□□□□ -2.31
Nup35Q8R4R6 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC0.6□□□□□ -2.31
Nup35Q8R4R6 Gm28232-201ENSMUST00000188683 315 ntBASIC0.6□□□□□ -2.31
Nup35Q8R4R6 Gm28481-201ENSMUST00000189231 315 ntBASIC0.6□□□□□ -2.31
Nup35Q8R4R6 Gm29059-201ENSMUST00000191534 315 ntBASIC0.6□□□□□ -2.31
Nup35Q8R4R6 Gm37765-201ENSMUST00000192395 315 ntBASIC0.6□□□□□ -2.31
Nup35Q8R4R6 Gm37237-201ENSMUST00000192893 315 ntBASIC0.6□□□□□ -2.31
Nup35Q8R4R6 Gm36968-201ENSMUST00000193737 315 ntBASIC0.6□□□□□ -2.31
Nup35Q8R4R6 Gm38290-201ENSMUST00000195238 315 ntBASIC0.6□□□□□ -2.31
Nup35Q8R4R6 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC0.6□□□□□ -2.31
Nup35Q8R4R6 AC126267.1-201ENSMUST00000214282 284 ntBASIC0.6□□□□□ -2.31
Nup35Q8R4R6 Gm18696-201ENSMUST00000220103 274 ntBASIC0.6□□□□□ -2.31
Nup35Q8R4R6 Gm46993-201ENSMUST00000220708 259 ntBASIC0.6□□□□□ -2.31
Nup35Q8R4R6 Gm25357-201ENSMUST00000082745 72 ntBASIC0.6□□□□□ -2.31
Nup35Q8R4R6 Gm22972-201ENSMUST00000083297 131 ntBASIC0.6□□□□□ -2.31
Nup35Q8R4R6 Gm15659-201ENSMUST00000118881 341 ntBASIC0.59□□□□□ -2.31
Nup35Q8R4R6 Gm24942-201ENSMUST00000158328 114 ntBASIC0.59□□□□□ -2.31
Nup35Q8R4R6 Gm25162-201ENSMUST00000158906 159 ntBASIC0.59□□□□□ -2.31
Nup35Q8R4R6 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC0.59□□□□□ -2.31
Nup35Q8R4R6 Gm17054-201ENSMUST00000169811 259 ntBASIC0.59□□□□□ -2.31
Nup35Q8R4R6 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC0.59□□□□□ -2.31
Nup35Q8R4R6 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC0.59□□□□□ -2.31
Nup35Q8R4R6 Gm17771-201ENSMUST00000194477 1147 ntBASIC0.59□□□□□ -2.31
Nup35Q8R4R6 Gm44429-201ENSMUST00000203542 186 ntBASIC0.59□□□□□ -2.31
Nup35Q8R4R6 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
Nup35Q8R4R6 AC124772.1-201ENSMUST00000221325 151 ntBASIC0.59□□□□□ -2.31
Nup35Q8R4R6 AC156560.1-201ENSMUST00000221425 256 ntBASIC0.59□□□□□ -2.31
Nup35Q8R4R6 Mir340-201ENSMUST00000083483 98 ntBASIC0.59□□□□□ -2.31
Nup35Q8R4R6 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC0.59□□□□□ -2.32
Nup35Q8R4R6 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC0.58□□□□□ -2.32
Nup35Q8R4R6 Gm14355-201ENSMUST00000117352 264 ntBASIC0.58□□□□□ -2.32
Nup35Q8R4R6 Gm14362-201ENSMUST00000121679 273 ntBASIC0.58□□□□□ -2.32
Nup35Q8R4R6 Gm25269-201ENSMUST00000122601 104 ntBASIC0.58□□□□□ -2.32
Nup35Q8R4R6 Gm14364-201ENSMUST00000129209 267 ntBASIC0.58□□□□□ -2.32
Nup35Q8R4R6 Gm15254-201ENSMUST00000149567 273 ntBASIC0.58□□□□□ -2.32
Nup35Q8R4R6 Gm23329-201ENSMUST00000157415 108 ntBASIC0.58□□□□□ -2.32
Nup35Q8R4R6 Gm22817-201ENSMUST00000157448 356 ntBASIC0.58□□□□□ -2.32
Nup35Q8R4R6 Gm3221-201ENSMUST00000164869 440 ntBASIC0.58□□□□□ -2.32
Nup35Q8R4R6 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.58□□□□□ -2.32
Nup35Q8R4R6 Gm20386-201ENSMUST00000174010 132 ntBASIC0.58□□□□□ -2.32
Nup35Q8R4R6 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
Nup35Q8R4R6 Gm27974-201ENSMUST00000183415 105 ntBASIC0.58□□□□□ -2.32
Nup35Q8R4R6 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
Nup35Q8R4R6 Gm27421-201ENSMUST00000184729 167 ntBASIC0.58□□□□□ -2.32
Nup35Q8R4R6 Gm38113-201ENSMUST00000193704 201 ntBASIC0.58□□□□□ -2.32
Nup35Q8R4R6 Gm43739-201ENSMUST00000198294 307 ntBASIC0.58□□□□□ -2.32
Nup35Q8R4R6 Gm44320-201ENSMUST00000199276 86 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 121.8 ms