Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm37281-201ENSMUST00000192412 439 ntBASIC3□□□□□ -1.93
Clrn1Q8K445 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3□□□□□ -1.93
Clrn1Q8K445 Gm43193-201ENSMUST00000197732 441 ntBASIC3□□□□□ -1.93
Clrn1Q8K445 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC3□□□□□ -1.93
Clrn1Q8K445 Gm44824-201ENSMUST00000207021 229 ntBASIC3□□□□□ -1.93
Clrn1Q8K445 CT010449.1-201ENSMUST00000220624 153 ntBASIC3□□□□□ -1.93
Clrn1Q8K445 CT009604.2-201ENSMUST00000225531 377 ntBASIC3□□□□□ -1.93
Clrn1Q8K445 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Clrn1Q8K445 Mir29b-2-201ENSMUST00000083478 81 ntBASIC3□□□□□ -1.93
Clrn1Q8K445 AF357428-201ENSMUST00000083815 69 ntBASIC3□□□□□ -1.93
Clrn1Q8K445 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Clrn1Q8K445 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3□□□□□ -1.93
Clrn1Q8K445 Gm44150-201ENSMUST00000203317 2619 ntBASIC3□□□□□ -1.93
Clrn1Q8K445 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Clrn1Q8K445 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Clrn1Q8K445 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
Clrn1Q8K445 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Clrn1Q8K445 Gm22590-201ENSMUST00000104247 128 ntBASIC2.99□□□□□ -1.93
Clrn1Q8K445 Gm23492-201ENSMUST00000116837 115 ntBASIC2.99□□□□□ -1.93
Clrn1Q8K445 Gm24730-201ENSMUST00000158228 117 ntBASIC2.99□□□□□ -1.93
Clrn1Q8K445 Gm22767-201ENSMUST00000158365 165 ntBASIC2.99□□□□□ -1.93
Clrn1Q8K445 Gm17166-201ENSMUST00000172006 431 ntBASIC2.99□□□□□ -1.93
Clrn1Q8K445 Gm28314-201ENSMUST00000191276 345 ntBASIC2.99□□□□□ -1.93
Clrn1Q8K445 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.99□□□□□ -1.93
Clrn1Q8K445 Gm36189-201ENSMUST00000204113 523 ntBASIC2.99□□□□□ -1.93
Clrn1Q8K445 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC2.99□□□□□ -1.93
Clrn1Q8K445 Gm44938-201ENSMUST00000208614 427 ntBASIC2.99□□□□□ -1.93
Clrn1Q8K445 Gm18188-201ENSMUST00000219386 478 ntBASIC2.99□□□□□ -1.93
Clrn1Q8K445 AC124400.1-201ENSMUST00000225779 193 ntBASIC2.99□□□□□ -1.93
Clrn1Q8K445 Gm22704-201ENSMUST00000083027 137 ntBASIC2.99□□□□□ -1.93
Clrn1Q8K445 Snora70-201ENSMUST00000083047 137 ntBASIC2.99□□□□□ -1.93
Clrn1Q8K445 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Clrn1Q8K445 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Clrn1Q8K445 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
Clrn1Q8K445 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Clrn1Q8K445 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Clrn1Q8K445 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Clrn1Q8K445 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Clrn1Q8K445 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
Clrn1Q8K445 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
Clrn1Q8K445 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
Clrn1Q8K445 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Clrn1Q8K445 n-R5s179-201ENSMUST00000122564 118 ntBASIC2.98□□□□□ -1.93
Clrn1Q8K445 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC2.98□□□□□ -1.93
Clrn1Q8K445 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Clrn1Q8K445 Mir6402-201ENSMUST00000183406 80 ntBASIC2.98□□□□□ -1.93
Clrn1Q8K445 Mir8096-201ENSMUST00000184526 127 ntBASIC2.98□□□□□ -1.93
Clrn1Q8K445 Gm27753-201ENSMUST00000184742 203 ntBASIC2.98□□□□□ -1.93
Clrn1Q8K445 Gm29452-201ENSMUST00000187996 313 ntBASIC2.98□□□□□ -1.93
Clrn1Q8K445 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Clrn1Q8K445 Gm37997-201ENSMUST00000193515 267 ntBASIC2.98□□□□□ -1.93
Clrn1Q8K445 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC2.98□□□□□ -1.93
Clrn1Q8K445 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC2.98□□□□□ -1.93
Clrn1Q8K445 AC153564.2-201ENSMUST00000219464 273 ntBASIC2.98□□□□□ -1.93
Clrn1Q8K445 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.98□□□□□ -1.93
Clrn1Q8K445 Gm9765-201ENSMUST00000043170 321 ntBASIC2.98□□□□□ -1.93
Clrn1Q8K445 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Clrn1Q8K445 AC122850.1-201ENSMUST00000220380 5690 ntBASIC2.98□□□□□ -1.93
Clrn1Q8K445 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Clrn1Q8K445 Gm44842-201ENSMUST00000209173 3372 ntBASIC2.98□□□□□ -1.93
Clrn1Q8K445 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Clrn1Q8K445 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
Clrn1Q8K445 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Clrn1Q8K445 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Clrn1Q8K445 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
Clrn1Q8K445 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Clrn1Q8K445 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Clrn1Q8K445 Gm22713-201ENSMUST00000116895 130 ntBASIC2.97□□□□□ -1.93
Clrn1Q8K445 Gm23791-201ENSMUST00000122553 293 ntBASIC2.97□□□□□ -1.93
Clrn1Q8K445 Gm23350-201ENSMUST00000158429 103 ntBASIC2.97□□□□□ -1.93
Clrn1Q8K445 Gm22527-201ENSMUST00000158816 106 ntBASIC2.97□□□□□ -1.93
Clrn1Q8K445 Gm26265-202ENSMUST00000196326 133 ntBASIC2.97□□□□□ -1.93
Clrn1Q8K445 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.97□□□□□ -1.93
Clrn1Q8K445 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Clrn1Q8K445 Gm36776-201ENSMUST00000207006 203 ntBASIC2.97□□□□□ -1.93
Clrn1Q8K445 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.97□□□□□ -1.93
Clrn1Q8K445 AC134577.1-201ENSMUST00000227572 295 ntBASIC2.97□□□□□ -1.93
Clrn1Q8K445 Gm22979-201ENSMUST00000082609 159 ntBASIC2.97□□□□□ -1.93
Clrn1Q8K445 Gm23247-201ENSMUST00000083373 107 ntBASIC2.97□□□□□ -1.93
Clrn1Q8K445 Mir384-201ENSMUST00000083565 88 ntBASIC2.97□□□□□ -1.93
Clrn1Q8K445 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
Clrn1Q8K445 Gm3956-201ENSMUST00000164882 2560 ntBASIC2.97□□□□□ -1.93
Clrn1Q8K445 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Clrn1Q8K445 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC2.96□□□□□ -1.93
Clrn1Q8K445 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Clrn1Q8K445 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Clrn1Q8K445 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Clrn1Q8K445 Gm26696-201ENSMUST00000181941 2848 ntBASIC2.96□□□□□ -1.94
Clrn1Q8K445 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Clrn1Q8K445 Gm12351-201ENSMUST00000118727 292 ntBASIC2.96□□□□□ -1.94
Clrn1Q8K445 Gm25625-201ENSMUST00000157221 96 ntBASIC2.96□□□□□ -1.94
Clrn1Q8K445 Gm23865-201ENSMUST00000157723 97 ntBASIC2.96□□□□□ -1.94
Clrn1Q8K445 Gm24106-201ENSMUST00000175498 127 ntBASIC2.96□□□□□ -1.94
Clrn1Q8K445 Gm25457-201ENSMUST00000179509 107 ntBASIC2.96□□□□□ -1.94
Clrn1Q8K445 Gm27285-201ENSMUST00000183875 127 ntBASIC2.96□□□□□ -1.94
Clrn1Q8K445 Gm27893-201ENSMUST00000184408 194 ntBASIC2.96□□□□□ -1.94
Clrn1Q8K445 Trbv18-201ENSMUST00000194256 294 ntBASIC2.96□□□□□ -1.94
Clrn1Q8K445 Gm43563-201ENSMUST00000196761 198 ntBASIC2.96□□□□□ -1.94
Clrn1Q8K445 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.96□□□□□ -1.94
Clrn1Q8K445 AC173115.1-201ENSMUST00000220835 211 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms